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OR413575.1__WNT47201.1__SPLA10_PHROGS00140__00140

Bact-Vir

OR413575.1__WNT47201.1__SPLA10_PHROGS00140__00140

Identity

Accession:
OR413575 ↗
Kingdom:
phage

Quality

78.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 60-144
PDB
D2 high residues 168-264
PDB
D3 high residues 409-549
PDB
D4 medium residues 668-743_900-936
PDB
D5 medium residues 963-1090
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4wvaB00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.64 59.0 4.08e-01 100.0% 43.2%
2okxA05 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.61 53.0 3.91e-01 100.0% 35.9%
1oe8A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.61 47.0 4.84e-01 96.1% 84.7%
2c2lA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 36.0 3.59e-01 99.2% 56.4%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 47.0 4.90e-01 99.2% 90.6%
3zheA02 1.25.40.760 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 48.0 4.05e-01 99.2% 53.6%
1yy7A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 42.0 4.57e-01 96.1% 91.4%
2vzbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 44.0 4.08e-01 87.5% 87.4%
1k74D00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.53 47.0 3.68e-01 96.9% 91.2%
3bt5A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 42.0 4.02e-01 85.9% 98.7%
3qbmB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 46.0 4.01e-01 97.7% 89.8%
3crvA02 1.10.275.30 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › 0.51 33.0 3.56e-01 78.1% 76.9%
2ckwA04 1.20.960.20 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.51 36.0 3.91e-01 93.0% 87.9%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3895604 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 43.0 3.98e-01 100.0% 47.5%
5083222 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.69 59.0 3.67e-01 100.0% 17.2%
4013890 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.66 59.0 4.08e-01 100.0% 29.5%
5047254 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 48.0 3.93e-01 100.0% 42.7%
3903488 109.2.1.12 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_65m 0.66 58.0 4.07e-01 100.0% 31.0%
4011751 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 42.0 3.58e-01 98.4% 39.0%
3274511 601.19.1.31 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › ICAT 0.64 35.0 4.22e-01 87.5% 82.5%
3170154 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 50.0 4.56e-01 100.0% 63.5%
3594923 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 42.0 3.49e-01 97.7% 39.5%
None 0.62 37.0 2.85e-01 99.2% 26.8%
3828651 109.4.1.621 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.61 38.0 3.83e-01 99.2% 62.4%
3790404 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 41.0 3.61e-01 98.4% 46.2%
2991698 109.4.1.186 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3 0.60 36.0 3.58e-01 99.2% 56.0%
4014050 603.2.1.0 alpha bundles › STAT-like › STAT › STAT 0.60 55.0 4.48e-01 99.2% 91.3%
3940619 109.4.1.2546 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8, TPR_17, CHIP_TPR_N 0.60 36.0 3.15e-01 99.2% 38.5%
3907407 109.4.1.20 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR 0.59 50.0 2.97e-01 98.4% 13.0%
4946837 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.59 42.0 4.02e-01 100.0% 63.5%
3611964 109.4.1.95 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.58 38.0 2.90e-01 99.2% 27.3%
3800295 109.4.1.1472 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2, Thoc2, THOC2_N 0.58 51.0 3.07e-01 97.7% 18.6%
3904284 601.1.3.15 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › A middle domain of Talin 1 › MNR 0.57 47.0 4.22e-01 87.5% 96.0%
3527769 109.25.1.1 alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN 0.56 46.0 4.83e-01 99.2% 96.5%
4013444 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 37.0 4.05e-01 100.0% 82.9%
3601991 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 49.0 3.72e-01 100.0% 61.0%
5038830 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.54 37.0 4.09e-01 87.5% 91.0%
1117660 3289.1.1.0 alpha complex topology › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 0.54 48.0 2.80e-01 99.2% 21.5%
3717798 109.4.1.628 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS 0.53 48.0 3.10e-01 98.4% 36.3%
3606521 109.4.1.394 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMC1_C 0.53 46.0 3.47e-01 98.4% 39.7%
3489329 109.4.1.1164 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND 0.53 37.0 3.02e-01 100.0% 37.6%
3781283 109.4.1.930 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_ECM29_C 0.52 47.0 3.67e-01 100.0% 56.8%
3925091 109.4.1.394 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMC1_C 0.52 48.0 3.80e-01 99.2% 60.0%
3713185 109.4.1.1811 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TT21_2nd, ARM_TT21_N 0.52 40.0 2.94e-01 81.2% 96.0%
3999856 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 43.0 3.09e-01 100.0% 31.4%
3468130 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 42.0 3.39e-01 96.9% 46.3%
3583316 109.4.1.595 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG7 0.51 46.0 3.02e-01 100.0% 33.3%
3576410 109.4.1.1707 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, ANAPC3, TPR_8, CHIP_TPR_N 0.50 38.0 3.14e-01 100.0% 44.9%
D6 medium residues 1091-1209
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vw5A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.76 65.0 4.42e-01 95.0% 27.5%
3gt5A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.76 63.0 4.30e-01 95.0% 26.9%
4v1sA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.74 59.0 4.13e-01 95.0% 27.9%
2g0dA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.69 61.0 4.14e-01 95.0% 31.4%
3pmmA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.69 60.0 4.09e-01 96.6% 28.9%
4o92A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.68 44.0 4.67e-01 77.3% 74.3%
4g10A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.67 46.0 4.40e-01 79.0% 60.3%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.67 29.0 4.12e-01 89.9% 90.2%
1e2aA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.67 50.0 5.32e-01 81.5% 90.2%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 40.0 4.85e-01 74.8% 93.5%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 46.0 5.11e-01 82.4% 93.5%
3eu8A00 1.50.10.140 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Glycoside hydrolase 144 (GH144) 0.65 59.0 4.02e-01 100.0% 28.7%
1wrdA00 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 45.0 4.92e-01 81.5% 87.8%
3cwzB01 1.20.58.900 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain 0.63 48.0 4.46e-01 79.0% 86.3%
2xzeB00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.63 46.0 4.43e-01 100.0% 66.7%
4hfkB00 1.20.120.1620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.61 33.0 3.67e-01 80.7% 64.3%
1orsC00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.59 42.0 4.06e-01 84.9% 65.2%
4gycA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.57 42.0 3.39e-01 82.4% 41.4%
8d7hD01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.56 43.0 3.81e-01 80.7% 74.0%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.56 39.0 3.64e-01 82.4% 56.2%
1q0gA00 1.20.120.400 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase 0.54 37.0 3.82e-01 76.5% 72.6%
3c2gB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 48.0 3.13e-01 100.0% 36.4%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.54 46.0 4.23e-01 96.6% 98.8%
3ay8A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 40.0 3.92e-01 81.5% 87.5%
1zvzA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 36.0 3.57e-01 81.5% 66.9%
4nwpD00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.52 37.0 3.50e-01 82.4% 59.1%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.51 43.0 3.94e-01 89.9% 94.8%
4etrB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 39.0 3.94e-01 82.4% 92.6%
2wiyA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.50 36.0 2.57e-01 75.6% 74.1%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2392946 109.2.1.22 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › GlcNAc_2-epim 0.71 62.0 4.27e-01 95.8% 29.1%
3855165 604.6.1.65 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT, GGA_N-GAT 0.71 49.0 4.79e-01 79.0% 65.4%
4836750 109.2.1.22 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › GlcNAc_2-epim 0.70 61.0 4.20e-01 96.6% 29.3%
5033376 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.69 64.0 4.48e-01 100.0% 34.8%
179348 109.2.1.23 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_88 0.69 60.0 4.09e-01 96.6% 28.9%
3491182 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.68 47.0 4.34e-01 79.0% 55.7%
3750030 604.12.1.15 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Mito_morph_reg 0.68 48.0 5.41e-01 93.3% 95.6%
5074383 109.2.1.23 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_88 0.67 59.0 4.01e-01 95.0% 27.8%
4881287 109.2.1.7 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Terpene_synth 0.65 41.0 3.64e-01 91.6% 43.9%
3516461 603.1.1.103 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.64 50.0 5.23e-01 82.4% 89.1%
3663566 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.63 45.0 3.61e-01 96.6% 37.1%
5010954 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.62 41.0 4.29e-01 81.5% 72.7%
185784 3368.1.1.1 alpha bundles › Rap2b (SMA2266) › Rap2b (SMA2266) › Rap2b (SMA2266) › Tai4 0.61 33.0 3.67e-01 80.7% 64.3%
3174765 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.59 45.0 3.74e-01 79.8% 56.6%
3336194 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 50.0 3.70e-01 94.1% 43.7%
4511226 6102.1.1.1 alpha arrays › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › SMC_ScpA 0.55 36.0 3.36e-01 97.5% 51.0%
4671217 140.1.1.11 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 0.55 35.0 3.70e-01 79.8% 71.4%
3938906 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 43.0 3.23e-01 95.8% 33.2%
4947816 601.28.1.0 alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.53 32.0 3.45e-01 93.3% 69.0%
4097522 601.25.1.1 alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › MnmE_helical 0.53 38.0 3.51e-01 76.5% 56.8%
3265360 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.53 35.0 3.13e-01 89.9% 49.4%
3799867 593.1.1.1 alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 0.53 37.0 3.48e-01 72.3% 63.4%