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OR413579.1__WNT47694.1__SPLA1b_PHROGS00017__00017
Bact-VirOR413579.1__WNT47694.1__SPLA1b_PHROGS00017__00017
Identity
- Accession:
- OR413579 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
TaxID: 3077597
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-88
Domain cluster:
rep: MG592609.1__AUR97833.1__NVP1244A_131__00131__D3-84
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kbgA02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.76 | 51.0 | 5.95e-01 | 74.0% | 100.0% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 54.0 | 5.32e-01 | 79.2% | 89.0% |
| 6az1E02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.71 | 46.0 | 5.42e-01 | 72.7% | 100.0% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.70 | 47.0 | 5.29e-01 | 72.7% | 91.4% |
| 2z1cB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 52.0 | 5.37e-01 | 90.9% | 82.4% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 50.0 | 4.52e-01 | 76.6% | 96.2% |
| 1eovA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 54.0 | 4.56e-01 | 87.0% | 87.3% |
| 1tvcA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 48.0 | 4.32e-01 | 75.3% | 96.3% |
| 4up7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 53.0 | 4.28e-01 | 87.0% | 74.3% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 40.0 | 4.30e-01 | 93.5% | 70.1% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 45.0 | 4.16e-01 | 70.1% | 99.0% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 53.0 | 4.44e-01 | 89.6% | 83.7% |
| 1uapA00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 54.0 | 4.51e-01 | 90.9% | 75.6% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 48.0 | 5.11e-01 | 79.2% | 100.0% |
| 2xgtB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 53.0 | 4.85e-01 | 89.6% | 93.1% |
| 3tu3B01 | 3.30.720.80 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.64 | 36.0 | 3.68e-01 | 75.3% | 55.3% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 44.0 | 4.46e-01 | 74.0% | 100.0% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 47.0 | 4.77e-01 | 80.5% | 80.8% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 47.0 | 4.09e-01 | 79.2% | 95.8% |
| 1l1oF01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 51.0 | 4.37e-01 | 90.9% | 92.4% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 57.0 | 4.95e-01 | 100.0% | 85.3% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 48.0 | 4.12e-01 | 83.1% | 100.0% |
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 47.0 | 4.62e-01 | 80.5% | 97.6% |
| 3m4pA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 51.0 | 4.52e-01 | 89.6% | 91.1% |
| 6k2lA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 47.0 | 4.13e-01 | 79.2% | 98.2% |
| 1iyjB04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 55.0 | 4.55e-01 | 100.0% | 75.4% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.62 | 46.0 | 3.73e-01 | 80.5% | 58.8% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.61 | 37.0 | 4.09e-01 | 100.0% | 80.7% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 51.0 | 4.31e-01 | 96.1% | 91.0% |
| 1eu3A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 43.0 | 4.31e-01 | 77.9% | 98.8% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 42.0 | 4.35e-01 | 100.0% | 78.4% |
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 41.0 | 4.41e-01 | 71.4% | 95.2% |
| 6p1hB02 | 2.40.50.430 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 47.0 | 4.01e-01 | 90.9% | 89.1% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 40.0 | 3.85e-01 | 71.4% | 100.0% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 33.0 | 3.73e-01 | 76.6% | 76.9% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 35.0 | 4.33e-01 | 97.4% | 100.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 36.0 | 4.06e-01 | 81.8% | 84.2% |
| 1nnxA00 | 2.40.50.200 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Bacterial OB-fold | 0.58 | 43.0 | 4.14e-01 | 81.8% | 91.4% |
| 5jjiE01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 4.26e-01 | 92.2% | 94.7% |
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.57 | 41.0 | 3.73e-01 | 77.9% | 91.0% |
| 2cqoA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 48.0 | 4.59e-01 | 97.4% | 92.4% |
| 5i4dA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 41.0 | 4.18e-01 | 80.5% | 96.1% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 37.0 | 3.74e-01 | 100.0% | 72.0% |
| 4da2A01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 42.0 | 4.19e-01 | 87.0% | 93.7% |
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.53 | 38.0 | 3.48e-01 | 79.2% | 100.0% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 37.0 | 4.10e-01 | 100.0% | 96.6% |
| 2cspA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.46e-01 | 74.0% | 90.8% |
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 39.0 | 4.19e-01 | 85.7% | 98.5% |
| 2d9rA00 | 2.40.30.100 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like | 0.52 | 35.0 | 3.42e-01 | 70.1% | 95.3% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.51 | 38.0 | 2.63e-01 | 83.1% | 35.8% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 38.0 | 3.18e-01 | 80.5% | 86.9% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2502895 | 2.27.1.0 ↗ | beta barrels › OB-fold | 0.82 | 74.0 | 7.48e-01 | 98.7% | 98.7% |
| 3989262 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.76 | 42.0 | 5.07e-01 | 74.0% | 84.0% |
| 4869653 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.73 | 54.0 | 4.99e-01 | 77.9% | 86.5% |
| 4439090 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.72 | 57.0 | 4.82e-01 | 87.0% | 64.6% |
| 5015046 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 52.0 | 5.05e-01 | 76.6% | 100.0% |
| 4499457 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 53.0 | 5.01e-01 | 77.9% | 92.2% |
| 4609120 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.71 | 50.0 | 4.81e-01 | 74.0% | 82.2% |
| 4487905 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.71 | 54.0 | 4.82e-01 | 80.5% | 71.4% |
| 4309540 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.70 | 53.0 | 4.80e-01 | 80.5% | 74.3% |
| 4033869 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.70 | 55.0 | 4.92e-01 | 83.1% | 74.3% |
| 4348646 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.70 | 54.0 | 4.91e-01 | 83.1% | 73.3% |
| 4939349 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.70 | 56.0 | 4.87e-01 | 85.7% | 84.3% |
| 4208913 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 52.0 | 5.18e-01 | 79.2% | 93.8% |
| 3964207 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.70 | 53.0 | 4.75e-01 | 80.5% | 71.4% |
| 5053887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 55.0 | 4.93e-01 | 84.4% | 91.4% |
| 3215090 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 49.0 | 5.21e-01 | 74.0% | 95.4% |
| 5069515 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.69 | 55.0 | 4.83e-01 | 85.7% | 85.2% |
| 4096168 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.69 | 52.0 | 5.14e-01 | 79.2% | 95.0% |
| 3230022 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 51.0 | 5.28e-01 | 77.9% | 98.6% |
| 4600925 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 53.0 | 4.91e-01 | 80.5% | 78.9% |
| 4539191 | 2.1.1.35 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rho_RNA_bind | 0.69 | 51.0 | 5.19e-01 | 77.9% | 93.3% |
| 4188423 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.69 | 53.0 | 4.56e-01 | 83.1% | 64.8% |
| 5060686 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.69 | 53.0 | 4.81e-01 | 83.1% | 73.3% |
| 3243150 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 51.0 | 5.17e-01 | 79.2% | 93.3% |
| 3383283 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.69 | 50.0 | 5.38e-01 | 79.2% | 100.0% |
| 4943272 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 50.0 | 5.55e-01 | 81.8% | 100.0% |
| 5046829 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 54.0 | 4.51e-01 | 85.7% | 91.9% |
| 4071867 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 59.0 | 5.04e-01 | 96.1% | 92.8% |
| 4990774 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 51.0 | 4.57e-01 | 80.5% | 100.0% |
| 3629514 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 50.0 | 4.97e-01 | 77.9% | 80.0% |
| 5076251 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 57.0 | 5.06e-01 | 92.2% | 89.1% |
| 4159859 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.68 | 53.0 | 4.88e-01 | 84.4% | 77.0% |
| 5065884 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 54.0 | 4.58e-01 | 85.7% | 82.4% |
| 5066804 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 55.0 | 5.27e-01 | 88.3% | 100.0% |
| 4984946 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 54.0 | 4.70e-01 | 85.7% | 85.2% |
| 4028194 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 59.0 | 5.03e-01 | 94.8% | 86.7% |
| 3707992 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.67 | 54.0 | 4.39e-01 | 87.0% | 77.2% |
| 3698264 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.67 | 54.0 | 4.00e-01 | 87.0% | 58.5% |
| 3313064 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.67 | 54.0 | 4.05e-01 | 87.0% | 61.1% |
| 3511418 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.67 | 53.0 | 5.55e-01 | 88.3% | 92.9% |
| 3992357 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.67 | 55.0 | 4.87e-01 | 90.9% | 72.2% |
| 4950506 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 49.0 | 4.41e-01 | 77.9% | 56.2% |
| 3596924 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 54.0 | 4.40e-01 | 87.0% | 82.1% |
| 3727607 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.67 | 53.0 | 4.29e-01 | 87.0% | 86.0% |
| 4255386 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.67 | 52.0 | 4.80e-01 | 84.4% | 79.0% |
| 4039730 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.67 | 49.0 | 4.47e-01 | 79.2% | 73.3% |
| 4297076 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.66 | 53.0 | 4.54e-01 | 87.0% | 62.4% |
| 4993340 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 53.0 | 4.93e-01 | 87.0% | 99.0% |
| 3638151 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 53.0 | 4.26e-01 | 87.0% | 80.7% |
| 4065889 | 2007.1.12.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase | 0.66 | 52.0 | 3.54e-01 | 85.7% | 62.1% |
| 4974931 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 52.0 | 4.52e-01 | 85.7% | 90.0% |
| 4943495 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 52.0 | 4.65e-01 | 85.7% | 91.8% |
| 1447954 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 54.0 | 4.42e-01 | 88.3% | 81.9% |
| 5053650 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 56.0 | 4.79e-01 | 94.8% | 87.2% |
| 4957484 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 49.0 | 4.53e-01 | 81.8% | 62.0% |
| None | — | 0.66 | 54.0 | 4.37e-01 | 89.6% | 67.6% | |
| 5066805 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 52.0 | 4.95e-01 | 84.4% | 100.0% |
| 4937075 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 52.0 | 4.69e-01 | 85.7% | 90.5% |
| 3989629 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.65 | 48.0 | 5.02e-01 | 77.9% | 95.7% |
| 4567567 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.65 | 49.0 | 4.36e-01 | 85.7% | 56.5% |
| 4987494 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.65 | 52.0 | 4.94e-01 | 85.7% | 97.8% |
| 4179590 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.65 | 54.0 | 4.69e-01 | 92.2% | 80.8% |
| 4979493 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 55.0 | 4.82e-01 | 96.1% | 90.8% |
| 4997744 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 56.0 | 4.92e-01 | 96.1% | 88.7% |
| 3791686 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.65 | 53.0 | 4.38e-01 | 89.6% | 69.3% |
| 4271291 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 48.0 | 5.07e-01 | 79.2% | 91.4% |
| 5056435 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 52.0 | 4.89e-01 | 84.4% | 96.7% |
| 5038005 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 56.0 | 4.80e-01 | 96.1% | 77.6% |
| 3781120 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.65 | 52.0 | 4.18e-01 | 88.3% | 82.6% |
| 5042273 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 56.0 | 4.96e-01 | 96.1% | 91.8% |
| 4012836 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 52.0 | 4.20e-01 | 88.3% | 78.0% |
| 5003400 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 46.0 | 4.16e-01 | 76.6% | 54.3% |
| 3239333 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 47.0 | 5.15e-01 | 77.9% | 100.0% |
| 4956522 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 55.0 | 4.86e-01 | 96.1% | 88.7% |
| 3186929 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 51.0 | 4.05e-01 | 87.0% | 80.0% |
| 5020392 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 54.0 | 4.58e-01 | 94.8% | 82.3% |
| 5028042 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 53.0 | 4.60e-01 | 92.2% | 81.7% |
| 3702234 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.64 | 50.0 | 5.01e-01 | 87.0% | 98.8% |
| 4062751 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.64 | 46.0 | 5.03e-01 | 77.9% | 100.0% |
| 3587502 | 2.1.1.38 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB | 0.63 | 49.0 | 4.98e-01 | 83.1% | 94.7% |
| 3213991 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 47.0 | 4.90e-01 | 80.5% | 97.1% |
| 4985312 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.63 | 48.0 | 4.25e-01 | 84.4% | 55.0% |
| 5046650 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.63 | 56.0 | 4.65e-01 | 100.0% | 83.0% |
| 5083382 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.63 | 45.0 | 4.87e-01 | 76.6% | 100.0% |
| 5040535 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.61 | 43.0 | 4.59e-01 | 75.3% | 100.0% |
| 4950974 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 48.0 | 4.36e-01 | 85.7% | 82.9% |
| 3396245 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.60 | 34.0 | 2.49e-01 | 71.4% | 22.6% |
| 5062587 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 50.0 | 4.73e-01 | 93.5% | 97.8% |
| 3668618 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 51.0 | 3.59e-01 | 100.0% | 41.6% |
| 5015768 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 45.0 | 4.15e-01 | 84.4% | 94.0% |
| 5009635 | 3534.1.1.5 ↗ | beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF1854 | 0.55 | 41.0 | 4.18e-01 | 81.8% | 81.3% |
| 3325200 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.55 | 40.0 | 3.52e-01 | 79.2% | 72.8% |
D2
medium
residues 99-132
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jqlA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 45.0 | 3.28e-01 | 85.3% | 25.2% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 45.0 | 2.77e-01 | 91.2% | 42.5% |
| 4jzjC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 46.0 | 3.82e-01 | 85.3% | 67.1% |
| 3nuwA01 | 3.30.420.300 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain | 0.60 | 45.0 | 3.64e-01 | 100.0% | 37.8% |
| 3qt2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 44.0 | 3.22e-01 | 82.4% | 36.1% |
| 3nuwA02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.59 | 42.0 | 2.74e-01 | 94.1% | 14.6% |
| 2x29A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 45.0 | 3.10e-01 | 100.0% | 23.1% |
| 1t6cA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.58 | 41.0 | 2.78e-01 | 94.1% | 18.2% |
| 4nzdB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 3.08e-01 | 85.3% | 64.2% |
| 2f51A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 44.0 | 3.31e-01 | 97.1% | 71.2% |
| 3dlbA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 39.0 | 2.71e-01 | 100.0% | 20.6% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.54 | 37.0 | 3.20e-01 | 85.3% | 51.4% |
| 3g7pA00 | 1.10.3100.20 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Protein of unknown function DUF269 | 0.52 | 41.0 | 2.85e-01 | 88.2% | 22.1% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 2.79e-01 | 79.4% | 71.6% |
| 3iwaA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 37.0 | 2.37e-01 | 85.3% | 13.1% |
| 1a21A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 2.86e-01 | 85.3% | 54.1% |
| 5k19A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 34.0 | 2.12e-01 | 97.1% | 22.3% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.52 | 39.0 | 3.17e-01 | 94.1% | 39.8% |
| 3ey7A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 37.0 | 2.69e-01 | 82.4% | 28.1% |
| 6ro0B02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 35.0 | 2.70e-01 | 82.4% | 27.3% |
| 2dleA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.18e-01 | 94.1% | 39.5% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 2.79e-01 | 94.1% | 43.2% |
| 3bwsA01 | 2.60.40.3070 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.08e-01 | 100.0% | 47.6% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 34.0 | 2.56e-01 | 85.3% | 26.5% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 35.0 | 2.63e-01 | 85.3% | 35.0% |
| 5u25A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 37.0 | 2.64e-01 | 85.3% | 81.1% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.50 | 34.0 | 3.06e-01 | 88.2% | 45.1% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.50 | 35.0 | 2.08e-01 | 100.0% | 7.5% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1282254 | 2484.1.1.46 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DGOK | 0.59 | 42.0 | 2.86e-01 | 94.1% | 18.4% |
| 289519 | 2484.1.1.60 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G | 0.59 | 42.0 | 4.18e-01 | 91.2% | 80.5% |
| 3931156 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 40.0 | 3.43e-01 | 88.2% | 45.7% |
| 3215166 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.56 | 39.0 | 3.12e-01 | 85.3% | 30.5% |
| 4643654 | 7063.1.1.0 ↗ | a/b three-layered sandwiches › C-terminal domain of poxin › C-terminal domain of poxin › C-terminal domain of poxin | 0.55 | 42.0 | 3.52e-01 | 97.1% | 44.0% |
| 4970709 | 2484.1.1.342 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29288 | 0.54 | 39.0 | 2.68e-01 | 85.3% | 57.1% |
| 4376478 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 37.0 | 3.05e-01 | 88.2% | 35.6% |
| 3579466 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.53 | 37.0 | 3.47e-01 | 85.3% | 56.4% |
| 4985600 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.52 | 36.0 | 3.08e-01 | 85.3% | 38.7% |
| 3214097 | 330.1.1.24 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C | 0.52 | 42.0 | 3.39e-01 | 94.1% | 52.9% |
| 3887951 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 36.0 | 2.76e-01 | 88.2% | 28.7% |
| 4065004 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.52 | 36.0 | 2.80e-01 | 85.3% | 28.2% |
| 3415471 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.52 | 35.0 | 2.70e-01 | 79.4% | 24.5% |
| 3617998 | 2003.1.10.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Synapsin | 0.52 | 35.0 | 2.70e-01 | 79.4% | 26.4% |
| 3403528 | 398.1.1.0 ↗ | few secondary structure elements › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers | 0.51 | 35.0 | 3.53e-01 | 70.6% | 60.0% |
| 4423214 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 35.0 | 2.81e-01 | 91.2% | 31.4% |
| 3639196 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.51 | 36.0 | 3.39e-01 | 85.3% | 83.7% |
| 3788141 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 36.0 | 3.09e-01 | 85.3% | 41.3% |
| 3264096 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 35.0 | 2.56e-01 | 79.4% | 25.0% |
| 5011404 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.50 | 36.0 | 2.88e-01 | 85.3% | 53.3% |
| 4989124 | 243.6.1.5 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › UPF0113_N | 0.50 | 37.0 | 2.90e-01 | 82.4% | 48.2% |
| 3406523 | 316.1.1.6 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Mab-21 | 0.50 | 37.0 | 2.42e-01 | 97.1% | 18.2% |
| 3707978 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.50 | 34.0 | 2.39e-01 | 100.0% | 20.5% |
| 4950216 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.50 | 37.0 | 3.52e-01 | 91.2% | 75.0% |