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OR413585.1__WNT48522.1__SPLA5c_PHROGS00030__00029

Bact-Vir

OR413585.1__WNT48522.1__SPLA5c_PHROGS00030__00029

Identity

Accession:
OR413585 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Seoulvirus› Salmonella_phage_SPLA5c

TaxID: 3077603

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-225
PDB
Domain cluster: rep: ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00151__D34-238
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 21.0 3.07e-01 88.6% 74.4%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.53 29.0 3.72e-01 78.3% 94.0%
D2 medium residues 284-353
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4egwA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.71 61.0 5.19e-01 98.6% 85.7%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.70 60.0 5.33e-01 98.6% 82.2%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.69 59.0 5.75e-01 100.0% 88.3%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 57.0 5.15e-01 94.3% 81.2%
3w6zA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.65 56.0 4.79e-01 100.0% 97.5%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.64 52.0 4.34e-01 94.3% 68.1%
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.62 54.0 4.69e-01 100.0% 73.2%
5mmjb02 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.61 43.0 4.82e-01 72.9% 100.0%
2x6hA03 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.61 48.0 3.52e-01 87.1% 67.0%
6wfqC01 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.61 44.0 3.54e-01 77.1% 66.2%
1vmgA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.60 43.0 4.14e-01 77.1% 67.1%
6k9pB02 1.20.1300.20 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 0.59 44.0 3.53e-01 87.1% 38.2%
3teqB00 1.10.287.3550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 45.0 4.02e-01 87.1% 97.0%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 37.0 3.67e-01 77.1% 74.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3714315 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.76 65.0 5.74e-01 95.7% 75.2%
5066847 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.74 64.0 5.96e-01 98.6% 93.3%
3740106 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.74 63.0 5.40e-01 95.7% 73.9%
3999485 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.73 63.0 5.02e-01 98.6% 70.1%
5049361 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.70 61.0 5.87e-01 100.0% 98.8%
3595877 192.4.1.0 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.66 47.0 4.01e-01 77.1% 45.0%
3399566 3937.1.1.4 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › PIEZO 0.64 51.0 3.37e-01 92.9% 20.3%
5075806 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.62 53.0 5.13e-01 100.0% 86.3%
4021061 6155.1.1.2 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.57 46.0 4.03e-01 92.9% 62.6%
3399823 174.1.1.29 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 0.57 48.0 3.66e-01 98.6% 47.8%