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OR413585.1__WNT48633.1__SPLA5c_PHROGS00141__00140
Bact-VirOR413585.1__WNT48633.1__SPLA5c_PHROGS00141__00140
Identity
- Accession:
- OR413585 ↗
- Kingdom:
- phage
Quality
69.7
mean pLDDT
Taxonomy
TaxID: 3077603
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-81
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 37.0 | 3.90e-01 | 91.9% | 66.7% |
| 4phtY02 | 3.30.420.370 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain | 0.60 | 38.0 | 4.06e-01 | 97.3% | 75.8% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 38.0 | 3.99e-01 | 89.2% | 71.2% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 43.0 | 3.09e-01 | 79.7% | 62.6% |
| 3htrA00 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.58 | 44.0 | 4.02e-01 | 86.5% | 61.2% |
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.58 | 40.0 | 3.31e-01 | 86.5% | 40.2% |
| 5t1dB00 | 3.10.390.20 | Alpha Beta › Roll › SAND domain › Viral glycoprotein L | 0.58 | 46.0 | 4.22e-01 | 97.3% | 65.7% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.58 | 45.0 | 4.04e-01 | 100.0% | 58.7% |
| 1b25A02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.58 | 42.0 | 3.18e-01 | 77.0% | 74.7% |
| 1aorA02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.58 | 42.0 | 3.14e-01 | 77.0% | 76.3% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 40.0 | 3.30e-01 | 73.0% | 89.9% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 36.0 | 3.61e-01 | 93.2% | 61.0% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 36.0 | 3.69e-01 | 93.2% | 64.9% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 36.0 | 3.85e-01 | 89.2% | 72.7% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 38.0 | 3.99e-01 | 94.6% | 77.6% |
| 3b7wA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.56 | 45.0 | 2.82e-01 | 89.2% | 44.4% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 38.0 | 3.39e-01 | 100.0% | 49.5% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 41.0 | 3.74e-01 | 100.0% | 58.7% |
| 4z3xA03 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.54 | 39.0 | 3.01e-01 | 77.0% | 72.6% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 43.0 | 3.15e-01 | 89.2% | 75.0% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.54 | 44.0 | 2.65e-01 | 95.9% | 26.7% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 39.0 | 2.58e-01 | 78.4% | 41.2% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 43.0 | 3.65e-01 | 90.5% | 88.5% |
| 5tgfD00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 42.0 | 2.81e-01 | 89.2% | 86.1% |
| 4gzuA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 45.0 | 3.64e-01 | 98.6% | 52.0% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 29.0 | 3.06e-01 | 87.8% | 56.7% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 43.0 | 3.60e-01 | 90.5% | 84.1% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 31.0 | 3.35e-01 | 82.4% | 67.7% |
| 3cxbB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 45.0 | 4.06e-01 | 98.6% | 75.7% |
| 2l73A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 41.0 | 3.38e-01 | 89.2% | 78.3% |
| 4arvA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.51 | 39.0 | 3.42e-01 | 86.5% | 88.1% |
| 3cxbA02 | 3.30.390.70 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Salmonella typhimurium protein | 0.51 | 44.0 | 3.99e-01 | 100.0% | 91.5% |
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.68e-01 | 94.6% | 87.6% |
| 4hadB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 37.0 | 2.79e-01 | 78.4% | 78.5% |
| 3tzgA00 | 2.40.160.150 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 43.0 | 3.11e-01 | 100.0% | 71.5% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 44.0 | 3.96e-01 | 100.0% | 88.0% |
| 1dbhA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 34.0 | 2.93e-01 | 86.5% | 40.6% |
| 6xw5A01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.50 | 35.0 | 2.60e-01 | 85.1% | 30.6% |
| 2e6mA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 43.0 | 3.27e-01 | 100.0% | 39.2% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035835 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.69 | 40.0 | 4.35e-01 | 86.5% | 70.0% |
| 3623960 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.68 | 48.0 | 3.64e-01 | 86.5% | 31.8% |
| 4968450 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 28.0 | 3.26e-01 | 74.3% | 54.5% |
| 3705234 | 5.1.4.73 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RAB3GAP2_N | 0.64 | 49.0 | 2.93e-01 | 82.4% | 13.5% |
| 3510664 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.62 | 44.0 | 3.51e-01 | 73.0% | 48.6% |
| 3881564 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.60 | 52.0 | 4.00e-01 | 100.0% | 73.9% |
| 3936953 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 45.0 | 3.05e-01 | 85.1% | 30.8% |
| 5073475 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 45.0 | 2.99e-01 | 83.8% | 35.8% |
| 4529966 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 43.0 | 2.84e-01 | 79.7% | 56.1% |
| 1936538 | 3146.1.1.3 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Phage_glycop_gL | 0.58 | 46.0 | 4.22e-01 | 97.3% | 65.7% |
| 3670512 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 49.0 | 3.60e-01 | 95.9% | 80.5% |
| 3584379 | 3091.1.1.1 ↗ | a+b complex topology › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin-VI_CBD | 0.57 | 36.0 | 3.17e-01 | 100.0% | 41.8% |
| 3239518 | 4099.1.1.28 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 | 0.56 | 38.0 | 3.75e-01 | 86.5% | 65.0% |
| 4492006 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.55 | 43.0 | 2.96e-01 | 85.1% | 40.0% |
| 3701641 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 43.0 | 2.95e-01 | 83.8% | 61.2% |
| 2095479 | 1170.1.2.3 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) › Phage_glycop_gL | 0.54 | 45.0 | 4.06e-01 | 98.6% | 64.8% |
| 3276218 | 220.1.1.30 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH | 0.54 | 35.0 | 2.97e-01 | 83.8% | 38.4% |
| 3980806 | 636.1.1.2 ↗ | alpha arrays › SopE-like GEF domain › SopE-like GEF domain › SopE-like GEF domain › Sif | 0.54 | 47.0 | 3.62e-01 | 100.0% | 85.6% |
| 3586955 | 220.1.1.88 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF956 | 0.54 | 47.0 | 4.29e-01 | 98.6% | 74.0% |
| 3175463 | 7026.1.1.5 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD | 0.54 | 37.0 | 2.72e-01 | 73.0% | 86.0% |
| 3368566 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 38.0 | 2.57e-01 | 75.7% | 30.3% |
| 3933159 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 46.0 | 3.06e-01 | 97.3% | 92.5% |
| 3861121 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 46.0 | 4.05e-01 | 98.6% | 66.1% |
| 4034336 | 4.8.1.13 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › ComK | 0.53 | 44.0 | 3.67e-01 | 97.3% | 58.6% |
| 3360888 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.53 | 37.0 | 2.32e-01 | 74.3% | 22.4% |
| 4948501 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.53 | 33.0 | 2.82e-01 | 74.3% | 37.9% |
| 3240491 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 45.0 | 3.78e-01 | 98.6% | 56.3% |
| 3817060 | 109.4.1.1794 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.52 | 37.0 | 2.30e-01 | 74.3% | 23.6% |
| 3557363 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 45.0 | 3.74e-01 | 100.0% | 72.6% |
| 3490456 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.39e-01 | 100.0% | 46.2% |
| 3515806 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 45.0 | 3.72e-01 | 100.0% | 57.0% |
| 1395707 | 5084.5.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BVU_2266-like | 0.51 | 43.0 | 3.11e-01 | 100.0% | 71.5% |
| 3281255 | 101.1.2.742 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7782 | 0.50 | 38.0 | 3.26e-01 | 81.1% | 65.0% |
| 4995089 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.50 | 33.0 | 2.71e-01 | 70.3% | 67.9% |
D2
medium
residues 82-144