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OR413585.1__WNT48743.1__SPLA5c_PHROGS00251__00250
Bact-VirOR413585.1__WNT48743.1__SPLA5c_PHROGS00251__00250
Identity
- Accession:
- OR413585 ↗
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Taxonomy
TaxID: 3077603
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-74
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3euhC02 | 1.10.10.2260 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain | 0.54 | 41.0 | 3.65e-01 | 89.2% | 56.5% |
| 4n06A02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.53 | 43.0 | 3.09e-01 | 95.9% | 90.2% |
| 3zgzA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.51 | 42.0 | 3.35e-01 | 98.6% | 81.4% |
D2
medium
residues 75-132
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cybD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 57.0 | 4.05e-01 | 87.9% | 62.6% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.68 | 55.0 | 3.46e-01 | 86.2% | 17.0% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 54.0 | 4.05e-01 | 87.9% | 71.1% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.64 | 50.0 | 4.03e-01 | 86.2% | 50.0% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.63 | 48.0 | 4.75e-01 | 86.2% | 78.1% |
| 1vt0k00 | 1.10.3230.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) | 0.62 | 52.0 | 3.96e-01 | 96.6% | 60.7% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 53.0 | 5.13e-01 | 96.6% | 87.7% |
| 3l09A01 | 1.20.58.1460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 43.0 | 3.73e-01 | 86.2% | 46.9% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.59 | 46.0 | 4.65e-01 | 87.9% | 86.4% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 44.0 | 4.16e-01 | 86.2% | 66.2% |
| 5u9nB00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.55 | 45.0 | 3.73e-01 | 98.3% | 77.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3177225 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 57.0 | 4.85e-01 | 84.5% | 57.8% |
| 5032076 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.70 | 54.0 | 4.55e-01 | 87.9% | 50.5% |
| 3974503 | 601.4.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › PilJ | 0.68 | 51.0 | 4.32e-01 | 84.5% | 89.5% |
| 3895472 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.67 | 51.0 | 3.70e-01 | 86.2% | 28.8% |
| 1148169 | 7566.1.1.1 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N,GTP-bdg_M | 0.63 | 56.0 | 4.08e-01 | 98.3% | 44.2% |
| 4991351 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.62 | 47.0 | 4.27e-01 | 82.8% | 86.3% |
| 3653085 | 2488.1.1.18 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › DTW | 0.61 | 49.0 | 3.18e-01 | 89.7% | 21.6% |
| 5015015 | 7523.1.1.8 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 | 0.61 | 48.0 | 3.28e-01 | 86.2% | 53.2% |
| 4874836 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.60 | 53.0 | 4.45e-01 | 100.0% | 78.8% |
| 3892891 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.57 | 44.0 | 4.06e-01 | 87.9% | 77.5% |
| 4338112 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 40.0 | 3.08e-01 | 91.4% | 29.0% |
| 3554755 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 46.0 | 4.27e-01 | 94.8% | 82.7% |
| 3649959 | 109.4.1.936 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ULK4 | 0.54 | 47.0 | 3.39e-01 | 100.0% | 63.4% |
| 4199201 | 568.1.1.0 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related | 0.54 | 48.0 | 4.40e-01 | 100.0% | 76.0% |
| 3677767 | 109.4.1.1991 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_CAF1_bind, HEAT_ULK4 | 0.54 | 46.0 | 2.87e-01 | 100.0% | 37.0% |