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OR420753.1__WOZ55739.1__HTVC041P_gp5__00005

Bact-Vir

OR420753.1__WOZ55739.1__HTVC041P_gp5__00005

Identity

Accession:
OR420753 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Aequorvirus› Pelagibacter_phage_HTVC041P

TaxID: 3072833

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-144
PDB
Domain cluster: rep: MW534378.1__QSM00074.1__SEA_CASHLINE_34__00034__D291-395
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 50.0 6.53e-01 73.2% 100.0%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 49.0 6.33e-01 73.9% 98.8%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 48.0 6.19e-01 78.2% 100.0%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 47.0 5.94e-01 73.9% 100.0%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 47.0 5.83e-01 71.8% 97.8%
2ly1A03 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.74 40.0 5.21e-01 73.9% 92.6%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 48.0 5.48e-01 75.4% 86.7%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 47.0 5.81e-01 78.9% 100.0%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 47.0 4.83e-01 93.7% 66.9%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 47.0 5.47e-01 73.9% 90.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.14e-01 96.5% 71.6%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 47.0 4.71e-01 93.0% 65.5%
3zmdA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 47.0 4.68e-01 93.7% 64.2%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 36.0 4.47e-01 80.3% 79.3%
5a48B00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.68 41.0 4.85e-01 73.2% 86.5%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 46.0 4.66e-01 93.7% 68.6%
2rkhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 38.0 4.67e-01 90.1% 93.2%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.66e-01 90.8% 85.2%
5nl6B01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 24.0 2.62e-01 89.4% 42.1%
2r9yA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.61 45.0 3.94e-01 78.2% 93.2%
1imvA02 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.60 45.0 3.98e-01 77.5% 96.1%
1jmoA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.59 45.0 3.84e-01 78.2% 95.2%
4au2B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.59 44.0 3.82e-01 78.2% 91.4%
3nqoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.72e-01 92.3% 79.1%
3ndaA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.56 42.0 3.58e-01 78.2% 88.8%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 30.0 3.88e-01 86.6% 94.9%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 31.0 3.91e-01 87.3% 95.1%
5e37A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 30.0 3.82e-01 79.6% 89.5%
2bl0C01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 29.0 3.86e-01 91.5% 97.3%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.55 30.0 3.85e-01 89.4% 93.8%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 31.0 3.85e-01 87.3% 100.0%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5011846 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.90 45.0 6.43e-01 74.6% 100.0%
5057164 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 47.0 5.62e-01 75.4% 79.0%
4973555 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.83 46.0 4.34e-01 71.1% 46.5%
4251909 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.80 47.0 6.06e-01 72.5% 97.6%
5066355 101.1.2.181 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.80 46.0 5.73e-01 84.5% 91.1%
5023957 101.1.2.280 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.79 45.0 5.83e-01 83.1% 98.8%
4963095 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.79 52.0 5.86e-01 90.8% 86.2%
4955128 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.79 45.0 4.51e-01 81.0% 55.6%
5046672 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 48.0 5.29e-01 76.8% 74.8%
5009770 101.1.2.181 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.78 45.0 5.86e-01 78.2% 100.0%
4997662 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 45.0 5.13e-01 73.9% 74.5%
4009179 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 44.0 5.56e-01 73.9% 90.0%
2685 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 47.0 5.89e-01 77.5% 97.8%
3510726 101.1.2.507 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 0.76 44.0 5.14e-01 74.6% 80.0%
5056734 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 50.0 5.51e-01 90.8% 81.7%
5046131 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 47.0 5.57e-01 83.8% 89.0%
4941351 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 45.0 5.74e-01 87.3% 100.0%
4995581 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 48.0 5.64e-01 73.2% 91.0%
5028122 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 47.0 4.97e-01 85.9% 69.2%
3405902 101.1.2.177 ↗ alpha arrays › HTH › HTH › winged helix domain › MARF1_LOTUS 0.74 43.0 5.48e-01 72.5% 100.0%
5030252 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 50.0 5.85e-01 83.8% 96.0%
4943320 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 47.0 5.11e-01 86.6% 76.7%
4963760 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 46.0 5.47e-01 86.6% 95.8%
1097187 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 40.0 4.89e-01 84.5% 85.9%
3490863 101.1.2.515 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_2nd_NFRKB 0.69 44.0 5.17e-01 71.1% 90.0%
4014609 101.1.1.79 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.68 32.0 4.53e-01 71.8% 95.4%
4928753 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 45.0 5.42e-01 70.4% 100.0%
3342515 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 50.0 5.49e-01 89.4% 93.0%
3316881 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 4.67e-01 89.4% 63.5%
3797700 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 43.0 5.03e-01 73.9% 93.0%
3909626 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.64 30.0 4.37e-01 76.8% 98.5%
1165372 101.1.2.9 ↗ alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV 0.64 48.0 4.86e-01 85.9% 79.0%
3669754 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 4.71e-01 80.3% 75.7%
3737796 101.1.1.10 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ARID 0.62 39.0 4.72e-01 76.8% 100.0%
3180424 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 4.22e-01 71.8% 71.0%
3923850 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.60 30.0 4.05e-01 87.3% 90.7%
3879519 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.60 33.0 4.36e-01 78.2% 97.5%
3910514 108.1.1.32 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_10 0.58 31.0 4.02e-01 85.2% 91.3%
3594651 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 47.0 4.94e-01 86.6% 98.5%
3564576 106.1.1.8 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › HisK-N-like 0.57 37.0 3.65e-01 88.7% 60.0%
3882422 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 30.0 3.79e-01 84.5% 88.7%
3479068 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 27.0 3.49e-01 79.6% 82.5%
3316490 108.1.1.20 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like 0.55 30.0 3.42e-01 81.0% 70.5%
3896785 108.1.1.48 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_9 0.55 26.0 3.46e-01 76.1% 84.0%
3240467 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 28.0 3.44e-01 86.6% 76.7%
3221554 4218.1.1.1 ↗ alpha bundles › TAFH domain-like › TAFH domain-like › TAFH domain-like › TAFH 0.54 31.0 3.63e-01 88.7% 80.0%
5030817 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.54 43.0 4.54e-01 83.8% 90.0%
3286881 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 42.0 4.45e-01 82.4% 89.2%
3755357 108.1.1.74 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7+EF-hand_8 0.54 29.0 3.66e-01 85.2% 87.1%
4027714 592.2.1.2 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG 0.54 39.0 4.34e-01 96.5% 97.3%
3990120 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.53 32.0 3.70e-01 85.9% 81.6%
4594347 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.52 45.0 3.29e-01 97.9% 96.2%
3489798 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 35.0 4.03e-01 79.6% 99.0%
3713092 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 31.0 3.71e-01 75.4% 94.4%