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OR424355.1__WQA18408.1__X__00034

Bact-Vir

OR424355.1__WQA18408.1__X__00034

Identity

Accession:
OR424355 ↗
Kingdom:
phage

Quality

76.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Litunavirus› Pseudomonas_phage_vB_Pae_TUMS_P11

TaxID: 3067296

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-121
PDB
Domain cluster: rep: NC_070970.1__YP_010671680.1__PQC31_gp07__00007__D19-77
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.75 60.0 5.79e-01 86.5% 79.7%
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.75 61.0 3.94e-01 86.5% 23.0%
2innB00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.75 59.0 3.35e-01 84.6% 9.3%
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.71 53.0 5.65e-01 80.8% 95.6%
4fd4A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.69 51.0 3.32e-01 78.8% 19.3%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.68 54.0 4.98e-01 86.5% 86.4%
1z8sA02 6.10.140.360 Special › Helix non-globular › Helix Hairpins › 0.65 46.0 4.94e-01 78.8% 95.2%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.64 49.0 4.46e-01 86.5% 62.2%
3vw4A01 1.10.340.50 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.64 47.0 3.97e-01 80.8% 58.7%
2ewfA02 1.20.1270.310 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.62 49.0 4.32e-01 90.4% 63.0%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 49.0 4.64e-01 86.5% 80.6%
4ri6A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.61 48.0 3.70e-01 88.5% 40.3%
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.60 45.0 4.20e-01 84.6% 64.2%
5mmjb02 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.59 44.0 4.40e-01 86.5% 78.8%
1vclA03 3.30.1750.10 Alpha Beta › 2-Layer Sandwich › hemolytic lectin cel-iii, domain 3 › Hemolytic lectin CEL-III, C-terminal domain 0.59 52.0 3.71e-01 98.1% 50.7%
2fji102 1.10.357.70 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex component Sec6, C-terminal domain 0.58 50.0 3.43e-01 100.0% 62.6%
8a9nA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 44.0 3.30e-01 90.4% 33.6%
4v19K02 1.10.10.250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain 0.53 46.0 4.06e-01 96.2% 93.3%
2v4jA01 6.10.140.1420 Special › Helix non-globular › Helix Hairpins › 0.52 44.0 4.14e-01 94.2% 77.8%
3e3rA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 42.0 3.45e-01 94.2% 88.9%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3281357 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.84 66.0 4.60e-01 82.7% 31.7%
5043119 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.76 61.0 5.50e-01 86.5% 68.6%
3587125 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.75 61.0 4.27e-01 88.5% 28.7%
5055477 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.74 65.0 5.50e-01 94.2% 90.0%
3509255 5057.1.1.0 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.70 57.0 4.55e-01 88.5% 46.0%
4202640 192.6.1.1 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.70 52.0 5.11e-01 80.8% 78.2%
1556809 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.64 49.0 4.56e-01 86.5% 66.7%
3999274 5086.1.1.102 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PTHB1_hp 0.62 46.0 3.72e-01 82.7% 42.9%
3616558 109.1.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C 0.60 47.0 3.76e-01 88.5% 45.5%
3353855 3887.2.1.0 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 0.59 43.0 3.98e-01 88.5% 58.7%
3190430 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 3.25e-01 98.1% 35.1%