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OR434018.1__WNM69085.1__SEA_ERUDITE_9__00009

Bact-Vir

OR434018.1__WNM69085.1__SEA_ERUDITE_9__00009

Identity

Accession:
OR434018 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Krampusvirus› Microbacterium_phage_Erudite

TaxID: 3077145

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-85
PDB
Domain cluster: rep: NC_048101.1__YP_009815906.1__HOU56_gp02__00002__D5-81
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gbjC01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 38.0 3.07e-01 92.5% 31.8%
7jiuA03 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.54 41.0 3.55e-01 83.7% 80.1%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.53 42.0 3.48e-01 83.7% 66.4%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.53 36.0 3.87e-01 87.5% 83.8%
5tuuA00 1.20.140.80 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP 0.51 40.0 3.23e-01 82.5% 86.8%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.51 39.0 3.76e-01 82.5% 79.1%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.50 43.0 3.81e-01 93.8% 81.5%
6vq6H01 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 37.0 2.72e-01 77.5% 83.8%
4mh4A02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.50 42.0 3.94e-01 88.7% 98.9%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3621732 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.62 42.0 3.87e-01 70.0% 82.9%
4015832 230.1.1.0 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like 0.61 38.0 3.54e-01 77.5% 47.6%
3491126 3382.1.1.1 ↗ alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.58 50.0 3.44e-01 100.0% 59.5%
3580612 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.53 44.0 3.57e-01 91.3% 70.3%
4145438 3747.1.1.3 ↗ a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bbr_C 0.51 36.0 3.32e-01 83.7% 58.0%
3253675 3008.1.1.0 ↗ a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.51 44.0 4.06e-01 97.5% 77.1%
5037750 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.51 38.0 2.77e-01 76.2% 49.7%
3597612 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.51 40.0 2.97e-01 98.8% 31.1%
5067768 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 35.0 3.16e-01 73.8% 92.2%