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OR449013.1__WNM70435.1__CPT_Mangalyan_001__00001

Bact-Vir

OR449013.1__WNM70435.1__CPT_Mangalyan_001__00001

Identity

Accession:
OR449013 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-209
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13589.13 best HATPase_c_3 37.9 2.40e-09 73.2% 70.1%
D2 high residues 214-312
PDB
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z5bB03 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.73 66.0 5.73e-01 100.0% 91.3%
4ipeB02 3.30.230.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.71 64.0 5.37e-01 99.0% 70.9%
3cwvA02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.68 60.0 5.26e-01 98.0% 92.1%
1qzrA02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.65 56.0 5.19e-01 93.9% 88.6%
2f1dA01 3.30.230.40 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Imidazole glycerol phosphate dehydratase; domain 1 0.62 50.0 5.20e-01 99.0% 97.8%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 47.0 4.79e-01 99.0% 85.6%
2ljpA00 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.59 50.0 4.76e-01 93.9% 83.2%
4p7aA02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.59 50.0 5.12e-01 92.9% 95.9%
2q7sA00 3.40.630.40 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases 0.58 42.0 3.12e-01 76.8% 98.9%
1bqbA01 3.10.170.10 Alpha Beta › Roll › Elastase; domain 1 › 0.53 36.0 3.16e-01 72.7% 46.1%
1bcrA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 44.0 3.29e-01 91.9% 48.8%
1bvuA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.51 42.0 3.68e-01 89.9% 68.5%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018928 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.77 70.0 6.31e-01 100.0% 85.2%
3968852 212.1.1.1 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 0.76 69.0 5.93e-01 98.0% 79.3%
3282393 212.1.1.1 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 0.76 69.0 6.01e-01 99.0% 80.0%
3321965 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.75 66.0 5.90e-01 93.9% 94.1%
3223062 212.1.1.1 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 0.75 69.0 5.82e-01 100.0% 82.5%
5017955 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.74 68.0 6.09e-01 100.0% 85.9%
4490100 212.1.1.9 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair 0.74 69.0 6.33e-01 100.0% 93.6%
3502190 212.1.1.9 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair 0.74 67.0 6.15e-01 100.0% 91.5%
3557551 212.1.1.24 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 0.74 67.0 6.07e-01 99.0% 86.9%
3597401 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.73 67.0 5.80e-01 100.0% 81.3%
3681600 212.1.1.9 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair 0.73 67.0 5.95e-01 98.0% 95.6%
3830910 212.1.1.9 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair 0.73 62.0 5.95e-01 92.9% 100.0%
3246869 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.72 65.0 4.88e-01 100.0% 83.3%
3569519 212.1.1.9 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair 0.72 62.0 5.20e-01 94.9% 76.5%
4028943 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.71 62.0 4.80e-01 96.0% 68.6%
4927751 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.71 64.0 5.65e-01 100.0% 89.0%
3487862 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.71 64.0 4.77e-01 99.0% 80.0%
2123278 212.1.1.1 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 0.71 64.0 5.46e-01 100.0% 76.4%
2323907 212.1.1.24 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 0.71 63.0 4.83e-01 99.0% 84.6%
3869716 212.1.1.24 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 0.70 63.0 5.47e-01 99.0% 78.0%
3494220 212.1.1.9 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair 0.70 60.0 5.31e-01 92.9% 95.7%
4937711 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 37.0 2.64e-01 100.0% 18.2%
4940508 212.1.1.24 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 0.69 61.0 5.76e-01 98.0% 95.0%
4926915 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.69 62.0 6.11e-01 98.0% 93.3%
4094312 212.1.1.1 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 0.69 60.0 5.22e-01 98.0% 72.9%
3310887 212.1.1.24 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 0.67 60.0 5.54e-01 99.0% 93.6%
5027858 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.67 59.0 5.53e-01 98.0% 99.2%
3719015 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.65 59.0 4.79e-01 99.0% 98.9%
3433616 212.1.1.2 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB 0.64 55.0 4.71e-01 94.9% 83.1%
5036176 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 40.0 3.35e-01 86.9% 37.6%
1160809 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.61 30.0 3.41e-01 73.7% 58.4%
4651201 212.1.1.8 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P 0.60 51.0 4.86e-01 93.9% 83.5%
4014103 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.60 50.0 4.08e-01 92.9% 73.7%
4680045 212.1.1.8 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P 0.59 50.0 4.78e-01 93.9% 82.6%
3349468 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.59 32.0 3.58e-01 90.9% 68.0%
4862453 212.1.1.7 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › IGPD 0.59 46.0 4.76e-01 98.0% 92.4%
4133346 2004.1.1.75 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1,MMR_HSR1_Xtn 0.58 36.0 2.64e-01 78.8% 21.4%
D3 high residues 346-436
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y6zA02 3.40.50.11260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 52.0 5.36e-01 96.7% 98.8%
5tvwA01 3.40.50.11260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 51.0 4.77e-01 96.7% 74.1%
2gq0B02 3.40.50.11260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 50.0 5.00e-01 95.6% 90.3%
2fy6A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 47.0 4.09e-01 91.2% 88.8%
6ve6A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 48.0 3.53e-01 97.8% 94.9%
2g6zA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 38.0 3.25e-01 70.3% 61.2%
4d3pA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 39.0 3.37e-01 73.6% 63.9%
1d3yB02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.54 47.0 3.58e-01 95.6% 92.6%
3imkA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 39.0 3.29e-01 75.8% 82.3%
2cjpA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 46.0 3.22e-01 97.8% 78.4%
2f46A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 35.0 3.12e-01 70.3% 69.0%
1xktA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 44.0 3.53e-01 94.5% 57.4%
1xs5A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 40.0 3.58e-01 87.9% 85.1%
1bgwA02 3.40.50.670 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 43.0 3.55e-01 96.7% 80.7%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1854674 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.61 54.0 4.83e-01 100.0% 73.7%
3757460 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.61 53.0 4.80e-01 100.0% 71.2%
4025684 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.61 54.0 4.89e-01 100.0% 80.0%
3702391 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.60 53.0 4.89e-01 100.0% 81.7%
4368731 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.60 53.0 4.81e-01 100.0% 80.0%
4331256 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.60 53.0 4.53e-01 100.0% 61.3%
3597175 3703.1.1.0 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain 0.60 53.0 4.94e-01 100.0% 79.1%
4070632 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.60 52.0 4.70e-01 100.0% 76.9%
4871570 212.1.1.1 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 0.60 52.0 4.74e-01 100.0% 76.6%
4336265 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.60 53.0 4.79e-01 100.0% 78.4%
3934272 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.60 52.0 4.85e-01 100.0% 78.3%
3598585 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.59 52.0 4.82e-01 100.0% 83.3%
4154828 3703.1.1.1 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.59 52.0 5.00e-01 100.0% 94.3%
4431526 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.59 40.0 4.11e-01 70.3% 76.7%
3956727 7579.1.1.57 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_11 0.57 49.0 3.83e-01 94.5% 72.0%
3178168 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.56 40.0 3.11e-01 74.7% 84.4%
4630252 7591.1.1.1 a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK 0.56 40.0 3.76e-01 73.6% 83.6%
2713405 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.55 48.0 3.49e-01 97.8% 91.4%
3968535 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.55 47.0 3.79e-01 94.5% 89.7%
3289686 3703.1.1.0 a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain 0.55 44.0 4.38e-01 100.0% 87.4%
3369633 7523.1.1.4 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 0.54 38.0 3.01e-01 71.4% 58.3%
5082431 7579.1.1.3 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.53 46.0 3.27e-01 97.8% 78.0%
4039208 7522.1.1.1 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C 0.53 45.0 3.78e-01 95.6% 81.2%
4541543 7579.1.1.10 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Thioesterase 0.52 44.0 3.49e-01 94.5% 67.2%
3921652 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.52 36.0 3.28e-01 71.4% 81.6%
3998032 7579.1.1.10 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Thioesterase 0.51 42.0 3.56e-01 92.3% 66.9%
4361090 2007.1.3.16 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › KaiA_N 0.51 35.0 2.99e-01 70.3% 51.6%
3411022 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.51 33.0 3.13e-01 86.8% 53.0%
D4 high residues 455-548
PDB
D5 high residues 553-657
PDB