←Back to structures

OR466728.1__WNO47654.1__X__00072

Bact-Vir

OR466728.1__WNO47654.1__X__00072

Identity

Accession:
OR466728 ↗
Kingdom:
phage

Quality

76.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Escherichia_phage_ES

TaxID: 3075444

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-67
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.77 52.0 3.77e-01 70.8% 28.5%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 46.0 3.46e-01 72.3% 30.8%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 36.0 3.71e-01 70.8% 54.0%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 45.0 3.53e-01 72.3% 33.6%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 48.0 3.93e-01 81.5% 73.4%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 35.0 3.50e-01 70.8% 51.5%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 42.0 2.82e-01 70.8% 46.3%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 53.0 3.77e-01 100.0% 71.6%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 43.0 3.59e-01 76.9% 80.6%
2de6A02 2.20.25.680 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 35.0 3.71e-01 72.3% 62.1%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 42.0 4.02e-01 72.3% 77.6%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 51.0 3.75e-01 96.9% 92.9%
4qa8A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.60 51.0 3.67e-01 100.0% 60.0%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 38.0 3.26e-01 72.3% 39.8%
3euoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.59 37.0 2.80e-01 95.4% 25.5%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.58 46.0 3.24e-01 86.2% 50.5%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 37.0 3.61e-01 76.9% 57.5%
1lmlA04 2.30.34.10 Mainly Beta › Roll › Leishmanolysin; domain 4 › Leishmanolysin domain 4 0.58 42.0 3.72e-01 78.5% 74.7%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.58 46.0 3.20e-01 100.0% 27.5%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.57 39.0 3.50e-01 70.8% 70.3%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 3.30e-01 89.2% 52.3%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.57 42.0 3.34e-01 78.5% 75.2%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.57 43.0 3.56e-01 81.5% 90.7%
4m00A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 43.0 3.01e-01 84.6% 66.8%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.56 41.0 3.85e-01 76.9% 74.7%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.69e-01 84.6% 81.6%
2crfA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 41.0 3.40e-01 81.5% 80.0%
8eg0B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 3.00e-01 100.0% 44.6%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.83e-01 92.3% 70.6%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.55 37.0 3.04e-01 72.3% 34.6%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 37.0 3.81e-01 72.3% 88.9%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 35.0 4.01e-01 72.3% 91.7%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.65e-01 90.8% 88.0%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.37e-01 95.4% 73.5%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 39.0 2.62e-01 84.6% 84.4%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 33.0 3.72e-01 72.3% 97.7%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 37.0 3.45e-01 81.5% 64.1%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.51 37.0 3.46e-01 78.5% 81.0%
2dy1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 2.79e-01 93.8% 39.6%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 39.0 3.97e-01 83.1% 95.2%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 47.0 2.92e-01 100.0% 99.7%
2leqA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 43.0 3.41e-01 100.0% 84.2%
2h84A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 34.0 2.76e-01 96.9% 32.4%
2fn0B00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.50 41.0 2.53e-01 89.2% 32.3%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4023915 220.1.1.53 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.68 49.0 4.11e-01 76.9% 89.6%
3473704 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 52.0 4.79e-01 83.1% 65.9%
3933782 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.68 48.0 4.46e-01 86.2% 57.6%
3693093 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 47.0 3.83e-01 76.9% 82.4%
4028811 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.65 47.0 3.95e-01 76.9% 83.5%
4940485 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.65 57.0 4.63e-01 98.5% 75.2%
3723092 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.65 47.0 3.86e-01 76.9% 85.8%
1283866 220.1.1.51 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP3_C 0.64 48.0 3.93e-01 81.5% 73.4%
3643227 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.63 46.0 3.58e-01 78.5% 65.3%
3868039 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.62 43.0 3.32e-01 72.3% 32.7%
3292855 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.62 45.0 3.70e-01 78.5% 74.4%
3792816 220.1.1.33 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.62 53.0 4.35e-01 96.9% 65.8%
3248668 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.61 46.0 4.38e-01 83.1% 91.3%
4026536 220.1.1.53 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.61 45.0 3.70e-01 80.0% 78.2%
3230771 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.60 47.0 4.27e-01 100.0% 62.2%
4029057 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 44.0 3.78e-01 80.0% 95.2%
4030191 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.59 49.0 2.87e-01 100.0% 36.5%
3928361 220.1.1.46 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.58 42.0 3.42e-01 80.0% 83.6%
3408648 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 45.0 4.00e-01 87.7% 94.0%
3828657 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 47.0 4.07e-01 89.2% 68.0%
4992470 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.58 37.0 3.87e-01 73.8% 71.7%
3224950 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 50.0 4.28e-01 96.9% 99.0%
3756160 220.1.1.33 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.57 42.0 3.32e-01 80.0% 58.6%
3627795 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 40.0 3.65e-01 72.3% 63.5%
3028388 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.57 39.0 3.81e-01 70.8% 84.7%
3740923 4.1.1.107 ↗ beta barrels › SH3 › SH3 › SH3 › XRN1_D1 0.56 48.0 3.52e-01 96.9% 37.8%
3500033 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 39.0 4.27e-01 92.3% 94.0%
5080678 4.26.1.0 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.56 42.0 4.41e-01 83.1% 98.2%
3626345 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 48.0 4.07e-01 98.5% 91.8%
3275677 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.55 43.0 3.35e-01 90.8% 51.9%
3936608 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.90e-01 96.9% 60.9%
3239485 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 41.0 3.36e-01 86.2% 95.4%
3912099 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 39.0 3.45e-01 81.5% 84.8%
3244890 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 40.0 3.42e-01 87.7% 63.3%
4068176 2004.1.1.414 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 0.51 42.0 2.79e-01 93.8% 37.9%
2410563 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.51 39.0 2.92e-01 83.1% 36.7%
4988831 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 33.0 3.55e-01 70.8% 80.0%
3547093 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.50 33.0 3.01e-01 78.5% 48.9%
3646226 375.1.1.31 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.50 37.0 3.50e-01 81.5% 66.3%
5059922 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 42.0 3.77e-01 95.4% 91.6%