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OR473000.1__WNL51041.1__SCREM2_gp122__00122

Bact-Vir

OR473000.1__WNL51041.1__SCREM2_gp122__00122

Identity

Accession:
OR473000 ↗
Kingdom:
phage

Quality

79.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Synechococcus_phage_S-CREM2

TaxID: 3075959

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 41-187
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xe1A00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 38.0 4.72e-01 77.6% 96.7%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 33.0 3.60e-01 73.5% 64.2%
3mcaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 40.0 4.46e-01 79.6% 94.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
140 1.1.7.34 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 0.63 38.0 4.72e-01 77.6% 96.7%
3251903 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 35.0 4.33e-01 72.1% 88.9%
3246056 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 36.0 4.18e-01 70.7% 83.0%
3924242 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.55 33.0 3.97e-01 80.3% 90.5%
4664583 1.1.7.50 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 0.52 37.0 3.84e-01 78.2% 77.8%
3275452 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 35.0 3.98e-01 78.9% 96.4%
D2 medium residues 202-234_1864-1919
PDB
Domain cluster: rep: MT711888.1__QNJ57336.1__Dolphis_29__00029__D178-264
D3 medium residues 575-718
PDB
Domain cluster: rep: IMGVR_UViG_3300037259_000549-3300037259-Ga0394886_009582_110_2272__D146-300
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2je8B05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 41.0 4.98e-01 92.4% 97.8%
3bwsA01 2.60.40.3070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 29.0 3.64e-01 99.3% 94.0%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.51 36.0 3.66e-01 95.1% 74.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3263396 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 30.0 3.71e-01 100.0% 92.5%
4288150 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 28.0 3.48e-01 100.0% 88.2%
D4 medium residues 987-1037_1630-1654
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8dwoJ01 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 43.0 4.17e-01 81.6% 72.7%
2d4lA01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.55 41.0 3.74e-01 81.6% 70.8%
1b23P03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 39.0 3.77e-01 81.6% 90.4%
3pjyA00 2.60.120.1140 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 0.53 37.0 3.21e-01 82.9% 44.2%
3m7aA01 2.60.120.1140 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 0.52 36.0 3.11e-01 82.9% 41.9%
5wjmA02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.50 38.0 3.42e-01 82.9% 61.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3474657 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 44.0 3.97e-01 81.6% 60.9%
3566270 1.1.8.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.53 39.0 3.76e-01 81.6% 88.9%
3310707 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.52 35.0 3.03e-01 71.1% 90.0%
3260661 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.57e-01 78.9% 66.7%
3589479 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.65e-01 82.9% 76.7%
4941419 3127.1.1.1 ↗ beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 0.50 35.0 3.18e-01 81.6% 50.9%
D5 medium residues 1050-1148_1391-1484
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.78 30.0 4.40e-01 97.9% 76.7%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.76 32.0 5.10e-01 96.9% 98.7%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 33.0 4.76e-01 98.4% 95.6%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.68 34.0 4.73e-01 98.4% 98.9%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 27.0 3.60e-01 84.5% 68.6%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 29.0 4.40e-01 95.3% 100.0%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 29.0 4.37e-01 95.3% 100.0%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 32.0 4.52e-01 81.9% 100.0%
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.63 32.0 4.38e-01 96.4% 95.9%
1vwxf00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.63 35.0 4.55e-01 99.0% 96.3%
1vhkA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.62 25.0 3.98e-01 89.1% 97.3%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 33.0 4.47e-01 97.9% 99.0%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.62 27.0 3.58e-01 91.7% 72.5%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.61 22.0 3.18e-01 98.4% 66.7%
5hmaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 25.0 3.54e-01 93.3% 79.3%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 28.0 4.12e-01 97.4% 98.8%
2zxdA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 24.0 3.39e-01 96.4% 75.8%
2e8yA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 28.0 3.77e-01 91.7% 84.2%
1a8pA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 31.0 4.17e-01 97.9% 100.0%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 30.0 3.61e-01 98.4% 73.3%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.56 21.0 3.57e-01 96.4% 100.0%
1p7hL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 29.0 3.66e-01 98.4% 85.0%
4rlzA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.55 32.0 4.08e-01 97.9% 98.2%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 26.0 3.52e-01 91.2% 87.5%
4cj0A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 25.0 3.41e-01 96.9% 84.2%
2ok7A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 32.0 4.05e-01 97.9% 98.2%
4g1vA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 32.0 3.97e-01 98.4% 96.6%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 21.0 3.44e-01 93.8% 100.0%
5mybA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 24.0 3.26e-01 97.9% 85.4%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4273414 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.82 31.0 5.30e-01 98.4% 100.0%
4854958 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.80 31.0 4.48e-01 99.0% 74.0%
3967745 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.79 32.0 5.24e-01 97.4% 98.7%
4163711 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.79 29.0 4.48e-01 96.9% 78.8%
4366483 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 34.0 5.15e-01 99.0% 96.5%
4429352 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 35.0 5.11e-01 99.5% 93.3%
3292420 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.74 29.0 4.23e-01 97.4% 77.8%
4999166 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 30.0 4.71e-01 97.4% 100.0%
3555622 1.1.7.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.71 30.0 4.58e-01 98.4% 98.7%
4382401 1.1.7.100 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N 0.70 33.0 4.83e-01 96.4% 100.0%
3388311 1.1.7.100 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N 0.69 32.0 4.78e-01 96.4% 100.0%
5024154 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 31.0 4.61e-01 99.5% 95.3%
5046975 1.1.7.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.69 31.0 4.60e-01 99.5% 98.8%
4460819 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.66 33.0 4.44e-01 97.4% 90.0%
3951894 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.66 33.0 4.70e-01 98.4% 98.9%
4571200 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 34.0 4.56e-01 97.4% 96.0%
4255584 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.65 32.0 4.47e-01 98.4% 93.0%
4205951 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 31.0 4.31e-01 97.9% 92.6%
3605269 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 34.0 4.69e-01 97.9% 100.0%
3893654 1.1.7.69 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel 0.64 33.0 4.17e-01 98.4% 81.7%
4551806 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 34.0 4.48e-01 97.9% 97.0%
2814716 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 32.0 4.46e-01 81.3% 98.9%
3389763 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.63 32.0 4.48e-01 99.0% 100.0%
3313542 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.62 34.0 4.46e-01 96.9% 97.1%
3590326 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.61 33.0 4.40e-01 96.4% 97.1%
3987460 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.60 34.0 4.48e-01 98.4% 98.2%
3224730 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 35.0 4.49e-01 99.0% 99.1%
3415428 1.1.7.69 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel 0.59 33.0 4.33e-01 100.0% 99.0%
4136251 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.59 30.0 3.94e-01 97.9% 88.6%
3751462 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 36.0 4.37e-01 99.0% 91.5%
3265100 1.1.7.90 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 0.57 34.0 4.36e-01 97.9% 99.1%
3698630 1.1.8.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.57 31.0 4.15e-01 90.7% 97.1%
3789503 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.57 32.0 4.13e-01 97.9% 98.1%
3236163 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.57 32.0 4.13e-01 97.9% 99.0%
4526316 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.57 29.0 4.03e-01 82.4% 100.0%
4181458 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.56 32.0 4.13e-01 99.0% 98.2%
3611782 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 32.0 3.73e-01 97.9% 79.3%
3510937 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.55 31.0 4.08e-01 99.0% 100.0%
3710460 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.55 32.0 4.13e-01 98.4% 100.0%
3358748 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.55 24.0 3.69e-01 96.4% 100.0%
3256764 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 35.0 4.28e-01 97.9% 98.5%
4012402 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.53 33.0 4.03e-01 98.4% 96.7%
4029209 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 18.0 2.88e-01 96.9% 78.6%
3338010 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.51 21.0 3.12e-01 93.8% 90.7%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 21.0 3.30e-01 97.4% 98.7%
3810482 1.1.7.46 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.50 33.0 3.88e-01 97.9% 94.1%
D6 medium residues 1169-1364
PDB
D7 medium residues 1655-1744
PDB
Domain cluster: rep: KJ019128.1__AIX38078.1__Syn7803US88_77__00077__D502-594
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4n6rB00 2.60.40.3960 Mainly Beta › Sandwich › Immunoglobulin-like › Velvet domain 0.68 58.0 4.53e-01 95.6% 75.8%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 48.0 5.09e-01 82.2% 88.5%
2b5iB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 51.0 5.04e-01 91.1% 84.0%
4b60A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 50.0 4.38e-01 87.8% 91.6%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 51.0 5.09e-01 92.2% 86.3%
4ojdH03 2.60.40.3980 Mainly Beta › Sandwich › Immunoglobulin-like › Cell-cell fusogen EFF/AFF, domain 3 0.62 54.0 5.15e-01 96.7% 83.7%
2rttA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 49.0 4.70e-01 86.7% 93.3%
1iarB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 51.0 5.04e-01 95.6% 86.5%
2di7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 52.0 4.92e-01 95.6% 86.0%
4b96A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.60 49.0 4.22e-01 92.2% 66.2%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 46.0 4.53e-01 84.4% 78.1%
4f80A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 4.69e-01 94.4% 84.9%
2ylkA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.59 48.0 4.20e-01 91.1% 64.8%
7esdB01 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 4.44e-01 82.2% 84.8%
5f7uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 48.0 4.55e-01 94.4% 90.1%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 48.0 3.99e-01 94.4% 72.0%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 46.0 4.71e-01 90.0% 98.9%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 4.21e-01 85.6% 88.1%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 43.0 4.57e-01 92.2% 98.7%
1rwhA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.57 41.0 3.84e-01 76.7% 90.4%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 43.0 4.57e-01 84.4% 100.0%
3e38A02 2.60.40.3090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 41.0 4.34e-01 90.0% 94.9%
4a8xA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 38.0 3.90e-01 72.2% 80.7%
2dhgA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 37.0 3.90e-01 70.0% 88.6%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.54 42.0 4.01e-01 88.9% 97.4%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.54 43.0 4.46e-01 91.1% 100.0%
3wp4A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.53 45.0 3.46e-01 97.8% 79.4%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 37.0 3.77e-01 90.0% 76.1%
2q2eB05 2.60.40.2960 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 42.0 4.22e-01 91.1% 98.9%
3zugB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.52 43.0 3.83e-01 96.7% 97.9%
4he6A00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 40.0 4.11e-01 88.9% 96.6%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.51 41.0 3.69e-01 91.1% 89.9%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.51 43.0 3.46e-01 96.7% 70.5%
3kg7B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 40.0 3.00e-01 91.1% 92.3%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 42.0 4.01e-01 93.3% 94.3%
1vq8B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 42.0 3.73e-01 93.3% 84.7%
1q48A00 3.90.1010.10 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.50 37.0 3.26e-01 94.4% 51.5%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3551607 11.1.1.283 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL2RB_N1 0.64 54.0 5.15e-01 94.4% 83.8%
3261126 11.1.1.669 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAPPC13_C 0.63 51.0 4.88e-01 90.0% 89.5%
3937438 11.1.5.84 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › ERMP1_C 0.63 51.0 4.51e-01 91.1% 83.6%
5059481 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 52.0 4.67e-01 93.3% 86.9%
4003859 11.1.5.94 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 0.62 50.0 3.89e-01 88.9% 45.9%
5068366 11.1.1.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.61 51.0 5.03e-01 92.2% 97.9%
3534909 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.61 51.0 4.59e-01 96.7% 66.4%
4965806 11.1.1.1429 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7857 0.61 48.0 4.58e-01 85.6% 98.1%
3241363 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 46.0 4.27e-01 92.2% 63.5%
3844504 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.60 51.0 4.85e-01 94.4% 80.0%
3241333 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 45.0 4.45e-01 92.2% 74.0%
3408311 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 49.0 4.77e-01 91.1% 82.0%
3241973 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 4.53e-01 84.4% 76.0%
3507103 11.1.5.94 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 0.60 48.0 3.29e-01 88.9% 25.9%
4386251 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.59 44.0 4.39e-01 92.2% 75.8%
3881344 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.59 47.0 4.76e-01 87.8% 88.9%
4559464 11.1.1.1323 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set, C2-set_3 0.59 50.0 3.76e-01 95.6% 37.5%
149587 11.1.5.8 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 0.59 49.0 4.23e-01 92.2% 65.8%
3767485 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 45.0 4.09e-01 84.4% 63.8%
5000734 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 44.0 4.34e-01 82.2% 100.0%
3274004 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 4.73e-01 95.6% 83.8%
3247755 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 4.10e-01 91.1% 67.3%
5048248 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.59 48.0 4.90e-01 93.3% 95.3%
3404993 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.58 48.0 4.61e-01 92.2% 79.0%
4124105 11.1.5.101 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Chlam_OMP6 0.58 46.0 4.40e-01 88.9% 90.0%
5081068 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 47.0 4.35e-01 93.3% 91.2%
5045644 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.58 46.0 3.84e-01 88.9% 73.5%
3257020 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.70e-01 97.8% 80.9%
3862496 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.57 46.0 4.21e-01 92.2% 64.8%
3967745 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.57 44.0 4.65e-01 93.3% 100.0%
5049497 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 4.24e-01 84.4% 91.4%
3843271 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.57 46.0 4.43e-01 90.0% 77.1%
3883175 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.57 46.0 4.34e-01 90.0% 73.6%
3742620 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.57 44.0 4.16e-01 86.7% 98.3%
4932806 11.1.5.132 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF11 0.57 44.0 4.30e-01 87.8% 93.3%
2556060 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.56 44.0 4.61e-01 93.3% 98.7%
2323919 10.32.1.66 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF6805 0.56 45.0 4.03e-01 90.0% 97.8%
3766673 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 46.0 4.57e-01 93.3% 86.3%
5078307 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.56 43.0 4.57e-01 83.3% 100.0%
3524918 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.56 45.0 4.32e-01 90.0% 77.1%
3596642 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 43.0 4.45e-01 92.2% 90.6%
3963302 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.55 46.0 4.42e-01 94.4% 94.3%
4883586 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 44.0 4.46e-01 95.6% 93.0%
3801941 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.55 41.0 3.90e-01 83.3% 91.3%
3477921 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 43.0 3.70e-01 88.9% 96.8%
3250384 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.55 47.0 3.86e-01 100.0% 55.6%
3638213 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 46.0 3.78e-01 97.8% 86.7%
2100983 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.54 40.0 4.07e-01 81.1% 92.1%
3996145 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.54 42.0 3.82e-01 87.8% 86.2%
2859181 11.1.1.587 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VEGFR1-3_N_Ig-like 0.54 44.0 4.52e-01 97.8% 98.8%
3464233 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.53 36.0 3.77e-01 88.9% 78.8%
3602819 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 43.0 4.25e-01 92.2% 97.9%
3789513 225.1.1.7 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.52 44.0 3.40e-01 97.8% 80.0%
3574784 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 43.0 4.10e-01 95.6% 94.5%
3904553 11.1.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.51 42.0 3.59e-01 92.2% 60.6%
None — 0.51 40.0 3.35e-01 90.0% 95.5%
3998175 11.1.5.114 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Integrin_A_Ig_2 0.50 40.0 3.80e-01 91.1% 79.1%
3416232 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 41.0 4.00e-01 91.1% 87.0%
3934435 4081.1.1.13 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF4139 0.50 38.0 3.42e-01 85.6% 92.9%
D8 medium residues 1766-1851
PDB
Domain cluster: rep: rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00171__D444-515
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.72 54.0 5.23e-01 80.2% 85.6%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.71 58.0 5.44e-01 87.2% 96.1%
2npiA03 2.40.30.330 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain 0.68 48.0 4.57e-01 73.3% 95.1%
1nrkA03 2.40.30.160 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.68 57.0 5.02e-01 89.5% 63.9%
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.67 57.0 5.69e-01 91.9% 98.9%
1wosA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.67 55.0 5.60e-01 89.5% 90.7%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.67 49.0 4.71e-01 76.7% 83.8%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 47.0 4.63e-01 72.1% 80.2%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 47.0 4.96e-01 73.3% 86.7%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 48.0 4.96e-01 75.6% 88.6%
4paaA05 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.66 55.0 5.73e-01 90.7% 100.0%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.66 53.0 3.58e-01 88.4% 32.3%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 46.0 2.91e-01 72.1% 14.9%
1xqbA01 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.65 44.0 4.10e-01 70.9% 77.1%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 45.0 3.91e-01 73.3% 51.9%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.62 43.0 4.52e-01 73.3% 84.8%
3tfiA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.62 52.0 3.49e-01 96.5% 23.0%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.61 43.0 4.05e-01 74.4% 63.3%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.61 44.0 4.36e-01 76.7% 82.6%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 48.0 4.76e-01 87.2% 97.8%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.60 41.0 4.01e-01 73.3% 62.6%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.59 44.0 3.33e-01 80.2% 80.4%
2a7yA00 2.30.30.440 Mainly Beta › Roll › SH3 type barrels. › Domain of unknown function DUF1918 0.58 42.0 4.34e-01 75.6% 100.0%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 41.0 3.99e-01 75.6% 83.0%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 41.0 3.92e-01 77.9% 79.2%
2x8kA03 2.60.120.860 Mainly Beta › Sandwich › Jelly Rolls › 0.57 40.0 3.80e-01 76.7% 79.3%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 42.0 4.22e-01 81.4% 88.5%
4p25D01 2.40.510.10 Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses 0.55 39.0 3.10e-01 75.6% 75.8%
3no8A00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.55 42.0 3.50e-01 82.6% 77.1%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 42.0 4.14e-01 88.4% 87.5%
4mb7A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.53 41.0 3.68e-01 83.7% 84.9%
2wzpP03 2.60.120.880 Mainly Beta › Sandwich › Jelly Rolls › 0.53 38.0 3.41e-01 76.7% 74.0%
1od3A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 40.0 3.59e-01 88.4% 57.3%
4odbA00 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.52 37.0 3.09e-01 76.7% 56.8%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 35.0 3.09e-01 73.3% 88.1%
3c7fA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 41.0 3.60e-01 95.3% 59.9%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963908 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.74 57.0 6.21e-01 90.7% 100.0%
4211588 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 52.0 3.21e-01 75.6% 28.0%
3939997 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.71 59.0 5.86e-01 89.5% 96.7%
4990333 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.70 51.0 4.29e-01 75.6% 91.4%
4398429 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.70 54.0 5.56e-01 81.4% 100.0%
3604617 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.70 49.0 4.22e-01 73.3% 94.8%
3975044 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 48.0 5.10e-01 70.9% 84.0%
4296283 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.69 55.0 5.61e-01 86.0% 97.6%
3256636 3613.1.1.2 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › NOL9_C 0.69 51.0 4.92e-01 76.7% 92.6%
3734457 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.69 51.0 3.53e-01 76.7% 52.2%
4606097 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.69 53.0 5.43e-01 82.6% 100.0%
3510907 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.69 56.0 5.65e-01 89.5% 97.7%
3793066 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.69 57.0 5.58e-01 89.5% 95.7%
4409090 1.1.8.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel 0.68 55.0 5.85e-01 86.0% 100.0%
5012955 1.1.7.128 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF515 0.68 50.0 5.04e-01 76.7% 97.6%
4215822 1.1.8.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel 0.68 52.0 5.72e-01 82.6% 100.0%
3522226 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 58.0 5.50e-01 93.0% 95.0%
4097656 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 56.0 5.43e-01 89.5% 93.7%
3504760 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 56.0 5.54e-01 90.7% 97.8%
3282462 1.1.8.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C 0.68 55.0 5.85e-01 89.5% 100.0%
4254437 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 54.0 5.44e-01 86.0% 98.8%
4301091 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 56.0 5.61e-01 91.9% 98.9%
4959198 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.67 47.0 4.02e-01 73.3% 84.8%
4623083 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.67 55.0 5.42e-01 90.7% 84.4%
4950699 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.67 48.0 4.89e-01 75.6% 89.4%
4362502 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.66 50.0 5.25e-01 81.4% 100.0%
3967745 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.66 46.0 4.87e-01 72.1% 84.0%
3226149 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 47.0 4.25e-01 74.4% 67.8%
4332590 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.66 54.0 5.50e-01 90.7% 95.3%
5024264 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.66 46.0 4.93e-01 73.3% 90.7%
5050226 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.66 48.0 4.56e-01 76.7% 91.0%
4072484 1.1.8.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel 0.66 59.0 5.84e-01 100.0% 97.8%
4200507 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.65 51.0 5.25e-01 83.7% 98.8%
3596642 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 47.0 4.77e-01 75.6% 78.8%
4270212 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.65 55.0 5.49e-01 93.0% 97.8%
4514238 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.65 51.0 5.33e-01 84.9% 100.0%
3387360 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 45.0 4.60e-01 74.4% 74.1%
3998042 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 45.0 4.30e-01 74.4% 72.4%
5037173 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 45.0 4.41e-01 73.3% 80.0%
3268887 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 45.0 4.36e-01 75.6% 76.0%
4319764 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 44.0 4.10e-01 73.3% 58.2%
4287778 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.63 52.0 5.20e-01 94.2% 97.8%
4627066 1.1.7.44 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift 0.62 45.0 4.12e-01 76.7% 62.6%
3452625 1.1.7.69 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel 0.62 45.0 4.26e-01 74.4% 73.0%
4075660 1.1.8.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C 0.62 51.0 5.19e-01 93.0% 96.4%
4042035 1.1.8.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel 0.62 52.0 5.19e-01 96.5% 98.9%
3680769 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 45.0 3.93e-01 76.7% 73.1%
3970319 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.61 53.0 5.24e-01 98.8% 96.7%
3388311 1.1.7.100 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N 0.61 42.0 4.24e-01 72.1% 90.6%
3944005 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.59 43.0 3.79e-01 77.9% 64.7%
3812521 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.58 47.0 4.35e-01 87.2% 88.2%
4156994 1.1.8.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel 0.58 47.0 4.87e-01 96.5% 100.0%
3575535 1.1.7.113 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 0.57 47.0 2.98e-01 91.9% 53.1%
3214875 11.1.1.835 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Irg-7 0.56 44.0 3.93e-01 84.9% 79.2%
3277196 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.56 47.0 4.78e-01 96.5% 98.8%
3252482 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.56 44.0 4.36e-01 89.5% 85.3%
4371270 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 46.0 4.46e-01 94.2% 84.2%
3250649 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.03e-01 87.2% 89.5%
3291157 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.53 39.0 3.33e-01 76.7% 84.3%
4022138 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 43.0 3.43e-01 97.7% 47.2%
3008273 11.1.1.72 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NEAT 0.51 40.0 3.55e-01 88.4% 83.6%