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OR475256.1__WNM65532.1__SEA_HEFTYBOY_62__00061

Bact-Vir

OR475256.1__WNM65532.1__SEA_HEFTYBOY_62__00061

Identity

Accession:
OR475256 ↗
Kingdom:
phage

Quality

78.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kratiovirus› Mycobacterium_phage_Heftyboy

TaxID: 3074488

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-108
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00088__D33-109
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qgpA00 1.10.30.50 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › 0.78 54.0 5.75e-01 78.9% 81.9%
1fxkC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 47.0 4.14e-01 100.0% 49.6%
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.68 49.0 4.25e-01 74.7% 64.1%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 31.0 3.13e-01 82.1% 45.0%
4ie5A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.56 39.0 2.76e-01 71.6% 33.0%
1qviA01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.53 46.0 4.31e-01 94.7% 75.7%
7yuiB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 41.0 4.26e-01 82.1% 100.0%
3w1yB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 32.0 3.12e-01 85.3% 56.7%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4998487 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.85 57.0 5.73e-01 75.8% 68.4%
4999440 378.1.1.27 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 0.83 57.0 6.07e-01 75.8% 78.8%
5019258 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.82 59.0 6.36e-01 75.8% 87.5%
4951302 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.82 55.0 6.40e-01 73.7% 100.0%
5049537 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.81 52.0 5.29e-01 75.8% 66.0%
4949181 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.81 56.0 6.21e-01 81.1% 89.3%
3952776 377.1.1.88 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH 0.81 53.0 6.23e-01 75.8% 96.9%
3277754 377.1.1.88 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH 0.80 50.0 5.78e-01 74.7% 85.7%
3950953 377.1.1.78 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH_5 0.80 50.0 5.77e-01 74.7% 85.7%
3952818 378.1.1.27 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 0.80 50.0 5.63e-01 74.7% 81.1%
3587782 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.80 55.0 5.21e-01 77.9% 60.9%
4932123 377.7.1.2 ↗ few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO › HNH 0.79 51.0 5.85e-01 72.6% 88.6%
3955812 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.79 52.0 5.29e-01 80.0% 68.8%
3953524 378.1.1.23 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 0.78 52.0 4.38e-01 75.8% 41.9%
185780 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.77 53.0 5.33e-01 78.9% 70.1%
3590055 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.74 56.0 5.25e-01 80.0% 85.2%
3286658 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.69 54.0 4.85e-01 83.2% 93.1%
4140340 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.69 47.0 3.95e-01 100.0% 44.0%
4998314 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.67 37.0 4.52e-01 75.8% 85.0%
4966182 378.1.1.9 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 0.66 52.0 4.71e-01 83.2% 99.2%
3185361 376.1.1.5 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.52 33.0 3.22e-01 76.8% 56.2%
3414632 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.51 37.0 3.84e-01 75.8% 94.4%
D2 medium residues 109-163
PDB