←Back to structures
OR475258.1__WNM65733.1__SEA_VULPECULA_61__00061
Bact-VirOR475258.1__WNM65733.1__SEA_VULPECULA_61__00061
Identity
- Accession:
- OR475258 ↗
- Kingdom:
- phage
Quality
91.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-48
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6tmfI00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.61 | 48.0 | 3.28e-01 | 100.0% | 46.7% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.61 | 50.0 | 3.72e-01 | 100.0% | 61.7% |
| 2egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 47.0 | 3.58e-01 | 100.0% | 70.6% |
| 2byfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 46.0 | 3.69e-01 | 100.0% | 75.7% |
| 5umbA02 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.56 | 41.0 | 3.60e-01 | 82.6% | 81.3% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.56 | 40.0 | 3.49e-01 | 82.6% | 73.8% |
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.56 | 44.0 | 3.77e-01 | 93.5% | 62.4% |
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.56 | 44.0 | 3.78e-01 | 93.5% | 62.5% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.55 | 45.0 | 3.19e-01 | 93.5% | 76.8% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 45.0 | 3.25e-01 | 100.0% | 79.8% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 3.15e-01 | 82.6% | 48.7% |
| 3mxqC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 3.02e-01 | 82.6% | 77.6% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.54 | 40.0 | 3.36e-01 | 87.0% | 91.3% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.18e-01 | 82.6% | 56.2% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 43.0 | 2.99e-01 | 100.0% | 68.9% |
| 1b96A00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.53 | 42.0 | 2.82e-01 | 100.0% | 65.6% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 42.0 | 3.53e-01 | 93.5% | 61.6% |
| 2k6vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 39.0 | 2.69e-01 | 82.6% | 61.0% |
| 3e1sA01 | 1.10.10.2220 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 38.0 | 3.07e-01 | 82.6% | 52.6% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.23e-01 | 84.8% | 59.8% |
| 3ke2B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.18e-01 | 91.3% | 51.0% |
| 1tv8B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 36.0 | 2.25e-01 | 82.6% | 11.3% |
| 1ii2A03 | 3.90.228.20 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.50 | 36.0 | 2.34e-01 | 82.6% | 38.7% |
| 1ef0B02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.50 | 43.0 | 2.89e-01 | 100.0% | 87.8% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.50 | 40.0 | 3.31e-01 | 100.0% | 100.0% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001363 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 47.0 | 3.85e-01 | 100.0% | 37.5% |
| 3187460 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.68 | 42.0 | 2.79e-01 | 95.7% | 15.1% |
| 5018390 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 42.0 | 3.10e-01 | 95.7% | 23.5% |
| 4012739 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 42.0 | 2.99e-01 | 95.7% | 20.7% |
| 5057098 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 43.0 | 3.04e-01 | 100.0% | 21.5% |
| 3640260 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 43.0 | 2.83e-01 | 71.7% | 83.9% |
| 4996628 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 42.0 | 2.84e-01 | 80.4% | 34.4% |
| 3946755 | 605.1.1.26 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF2058 | 0.58 | 51.0 | 3.83e-01 | 100.0% | 41.7% |
| 5070036 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 43.0 | 3.13e-01 | 84.8% | 34.7% |
| 3958859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 43.0 | 3.66e-01 | 84.8% | 62.5% |
| 3651056 | 252.1.1.4 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › DUF7650 | 0.57 | 44.0 | 3.55e-01 | 87.0% | 41.5% |
| 3719487 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.57 | 42.0 | 2.64e-01 | 82.6% | 33.3% |
| 3927309 | 221.1.1.36 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N | 0.56 | 46.0 | 3.50e-01 | 97.8% | 52.5% |
| 4849346 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.56 | 43.0 | 2.77e-01 | 93.5% | 84.8% |
| 5082698 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.55 | 39.0 | 3.34e-01 | 82.6% | 92.2% |
| 4986012 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.55 | 39.0 | 2.66e-01 | 82.6% | 23.3% |
| 4022291 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.54 | 46.0 | 3.16e-01 | 97.8% | 85.3% |
| 4672256 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.54 | 40.0 | 3.09e-01 | 82.6% | 83.5% |
| 4061942 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.54 | 42.0 | 3.13e-01 | 89.1% | 76.8% |
| 3585116 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 45.0 | 2.91e-01 | 100.0% | 37.9% |
| 4009182 | 101.1.2.611 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH3_Lhr | 0.54 | 41.0 | 3.38e-01 | 95.7% | 51.4% |
| 5064977 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 40.0 | 3.58e-01 | 93.5% | 75.0% |
| 4971711 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 41.0 | 3.19e-01 | 93.5% | 52.0% |
| 4999154 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.54 | 39.0 | 3.34e-01 | 82.6% | 57.6% |
| 4955418 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 2.82e-01 | 87.0% | 28.6% |
| 3568566 | 2007.1.19.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › PLA2_B | 0.53 | 45.0 | 2.60e-01 | 100.0% | 95.9% |
| 3937147 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.53 | 36.0 | 2.11e-01 | 71.7% | 88.2% |
| 5033290 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.53 | 40.0 | 2.99e-01 | 84.8% | 40.0% |
| 3910121 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.53 | 41.0 | 3.08e-01 | 100.0% | 38.7% |
| 3236052 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.53 | 42.0 | 3.34e-01 | 100.0% | 80.0% |
| 5013495 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 41.0 | 3.07e-01 | 87.0% | 41.7% |
| 3664080 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.53 | 40.0 | 3.17e-01 | 89.1% | 69.1% |
| 4969068 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.52 | 39.0 | 3.24e-01 | 84.8% | 58.9% |
| 3786336 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.52 | 43.0 | 3.10e-01 | 100.0% | 43.0% |
| 4990676 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.52 | 38.0 | 3.04e-01 | 84.8% | 35.5% |
| 168923 | 2485.1.1.12 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC | 0.52 | 39.0 | 2.69e-01 | 82.6% | 61.0% |
| 4358890 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.52 | 41.0 | 3.11e-01 | 89.1% | 83.5% |
| 5030563 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.52 | 38.0 | 3.12e-01 | 82.6% | 51.6% |
| 4965874 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.52 | 40.0 | 2.93e-01 | 87.0% | 36.6% |
| 5052844 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.52 | 38.0 | 2.60e-01 | 84.8% | 24.9% |
| 3446210 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 40.0 | 3.06e-01 | 100.0% | 51.4% |
| 3490468 | 59.1.2.2 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › Ydr279_N | 0.51 | 40.0 | 3.55e-01 | 93.5% | 97.3% |
| 3998693 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.51 | 41.0 | 2.46e-01 | 95.7% | 14.8% |
| 3578921 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.51 | 40.0 | 2.47e-01 | 97.8% | 16.8% |
| 3783767 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.51 | 42.0 | 2.65e-01 | 95.7% | 49.0% |
| 2987353 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.51 | 38.0 | 2.48e-01 | 89.1% | 43.8% |
| 3980619 | 4038.1.1.7 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal_2 | 0.51 | 36.0 | 2.27e-01 | 80.4% | 48.4% |
| 3515531 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.50 | 35.0 | 2.06e-01 | 95.7% | 6.6% |
| 5048466 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 2.80e-01 | 87.0% | 36.4% |
| 3720546 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.50 | 39.0 | 2.83e-01 | 93.5% | 55.6% |
| 5035685 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.50 | 36.0 | 2.81e-01 | 82.6% | 46.0% |
| 4498408 | 101.1.2.171 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_52 | 0.50 | 32.0 | 2.98e-01 | 100.0% | 44.6% |