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OR475258.1__WNM65738.1__SEA_VULPECULA_28__00028
Bact-VirOR475258.1__WNM65738.1__SEA_VULPECULA_28__00028
Identity
- Accession:
- OR475258 ↗
- Kingdom:
- phage
Quality
82.7
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 57-115
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qdrB00 | 2.30.30.970 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 4.09e-01 | 78.0% | 91.8% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 2.91e-01 | 86.4% | 87.4% |
| 1t02A02 | 3.90.770.10 | Alpha Beta › Alpha-Beta Complex › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 | 0.52 | 42.0 | 2.94e-01 | 100.0% | 97.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587325 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.61 | 35.0 | 4.18e-01 | 91.5% | 100.0% |
| 5045815 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 38.0 | 3.61e-01 | 83.1% | 54.3% |
| 3943640 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 33.0 | 3.55e-01 | 89.8% | 68.0% |
| 2429646 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 35.0 | 2.93e-01 | 88.1% | 42.6% |
| 3527488 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.50 | 41.0 | 3.03e-01 | 100.0% | 82.1% |
D2
medium
residues 116-227
Domain cluster:
rep: MK448585.1__QBX12008.1__JavanS625_0002__00014__D2-144
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08797.17 best | HIRAN | 49.1 | 5.60e-13 | 83.0% | 69.8% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k2yA00 | 3.30.70.2330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.87 | 71.0 | 7.47e-01 | 84.8% | 95.1% |
| 7oo1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.60 | 34.0 | 4.03e-01 | 84.8% | 80.5% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.57 | 29.0 | 3.53e-01 | 90.2% | 74.6% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.56 | 32.0 | 3.62e-01 | 90.2% | 73.0% |
| 2j3rB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.54 | 35.0 | 3.13e-01 | 92.0% | 45.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2072038 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.87 | 70.0 | 7.34e-01 | 83.0% | 95.0% |
| 3310707 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.84 | 67.0 | 6.33e-01 | 83.0% | 74.6% |
| 3330336 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.83 | 68.0 | 6.62e-01 | 84.8% | 81.7% |
| 3697243 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.80 | 68.0 | 6.39e-01 | 88.4% | 88.5% |
| 2069093 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.79 | 69.0 | 6.65e-01 | 91.1% | 92.9% |
| 3740685 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.79 | 61.0 | 6.21e-01 | 84.8% | 81.8% |
| 4588531 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.77 | 63.0 | 5.96e-01 | 84.8% | 80.0% |
| 3828376 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.77 | 60.0 | 5.66e-01 | 84.8% | 69.2% |
| 4446420 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.77 | 62.0 | 6.22e-01 | 84.8% | 94.8% |
| 3665217 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.77 | 68.0 | 6.22e-01 | 92.9% | 90.7% |
| 4387556 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.76 | 59.0 | 6.31e-01 | 84.8% | 91.9% |
| 4130134 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.76 | 61.0 | 5.57e-01 | 84.8% | 66.4% |
| 3334834 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.76 | 61.0 | 6.33e-01 | 84.8% | 94.2% |
| 4954705 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.74 | 61.0 | 6.24e-01 | 86.6% | 90.9% |
| 3635125 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.73 | 62.0 | 5.40e-01 | 89.3% | 82.9% |
| 4952916 | 109.4.1.3613 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIRAN | 0.70 | 62.0 | 4.43e-01 | 92.9% | 35.3% |
| 3203084 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.70 | 61.0 | 5.32e-01 | 92.0% | 85.0% |
| 3195416 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.68 | 58.0 | 5.26e-01 | 92.0% | 92.0% |
| 4933665 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.65 | 47.0 | 5.22e-01 | 84.8% | 94.4% |
| 4411010 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.62 | 35.0 | 3.27e-01 | 90.2% | 44.4% |
| 5028313 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 31.0 | 3.62e-01 | 91.1% | 67.5% |
| 4934193 | 2.21.1.5 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 | 0.61 | 48.0 | 4.26e-01 | 84.8% | 98.8% |
| 1498215 | 306.9.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › MecA substrate binding domain › MecA substrate binding domain › MecA | 0.59 | 40.0 | 4.42e-01 | 92.9% | 87.8% |
| 3251044 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.56 | 31.0 | 2.77e-01 | 91.1% | 37.0% |
| 1005534 | 1.1.7.37 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FlgT_C | 0.56 | 32.0 | 3.61e-01 | 90.2% | 72.2% |
| 3424661 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 38.0 | 2.78e-01 | 70.5% | 58.6% |
| 4999898 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 31.0 | 3.48e-01 | 92.0% | 70.0% |
| 3641694 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.51 | 29.0 | 2.97e-01 | 92.0% | 57.1% |