←Back to structures
OR475265.1__WNM66328.1__SEA_CULVER_57__00049
Bact-VirOR475265.1__WNM66328.1__SEA_CULVER_57__00049
Identity
- Accession:
- OR475265 ↗
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Taxonomy
TaxID: 3035370
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-83
Domain cluster:
rep: IMGVR_UViG_2529292698_000002-2529292698-2529621275__D4-94
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.77 | 71.0 | 4.10e-01 | 98.8% | 16.8% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.70 | 58.0 | 5.23e-01 | 88.0% | 74.3% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.66 | 47.0 | 3.77e-01 | 74.7% | 90.1% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.64 | 43.0 | 3.59e-01 | 98.8% | 39.2% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 42.0 | 3.79e-01 | 74.7% | 93.0% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 50.0 | 3.34e-01 | 100.0% | 55.0% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 46.0 | 3.56e-01 | 91.6% | 99.4% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 31.0 | 3.44e-01 | 90.4% | 72.3% |
| 2z1aA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 36.0 | 2.47e-01 | 71.1% | 62.0% |
| 2gtlM02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 43.0 | 3.55e-01 | 94.0% | 83.1% |
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 2.93e-01 | 100.0% | 47.1% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 38.0 | 2.82e-01 | 80.7% | 58.6% |
| 6bm0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.85e-01 | 97.6% | 55.0% |
| 4o3vA00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.50 | 37.0 | 3.23e-01 | 80.7% | 100.0% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.50 | 43.0 | 2.92e-01 | 100.0% | 30.4% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.50 | 42.0 | 3.42e-01 | 96.4% | 48.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4007747 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.86 | 71.0 | 3.90e-01 | 98.8% | 6.5% |
| 4441857 | 3347.1.1.6 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531, TEN_YD-shell | 0.86 | 67.0 | 4.19e-01 | 100.0% | 17.4% |
| 4570038 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.84 | 73.0 | 4.05e-01 | 100.0% | 7.8% |
| 4150297 | 3735.1.1.9 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat+DUF6531 | 0.82 | 71.0 | 4.27e-01 | 98.8% | 15.2% |
| 4119187 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.81 | 71.0 | 3.92e-01 | 100.0% | 7.9% |
| 3984133 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.76 | 71.0 | 3.90e-01 | 100.0% | 37.3% |
| 3915512 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.75 | 68.0 | 3.79e-01 | 97.6% | 8.7% |
| 3237193 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.74 | 69.0 | 3.82e-01 | 100.0% | 36.6% |
| 3944564 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.73 | 68.0 | 3.85e-01 | 100.0% | 40.0% |
| 3921013 | 3735.1.1.0 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein | 0.70 | 65.0 | 3.50e-01 | 100.0% | 23.0% |
| 3506427 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.67 | 46.0 | 4.02e-01 | 71.1% | 51.2% |
| 4067273 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.62 | 45.0 | 3.59e-01 | 75.9% | 43.6% |
| 4188272 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.61 | 50.0 | 3.93e-01 | 92.8% | 44.7% |
| 4347651 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.59 | 50.0 | 3.81e-01 | 91.6% | 92.4% |
| 3794738 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.58 | 41.0 | 3.10e-01 | 73.5% | 41.5% |
| 3196366 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.58 | 49.0 | 3.90e-01 | 98.8% | 44.3% |
| 4404709 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.57 | 48.0 | 3.70e-01 | 90.4% | 98.3% |
| 3965131 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.57 | 48.0 | 4.69e-01 | 100.0% | 87.8% |
| 5034864 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.56 | 40.0 | 2.83e-01 | 74.7% | 99.2% |
| 4092565 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.56 | 47.0 | 3.69e-01 | 90.4% | 99.4% |
| 4408461 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.56 | 47.0 | 3.56e-01 | 90.4% | 93.4% |
| 4127270 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.55 | 47.0 | 3.61e-01 | 90.4% | 94.8% |
| 3619122 | 5.1.3.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SGL, SSL_N | 0.55 | 47.0 | 3.17e-01 | 100.0% | 40.5% |
| 4064755 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.55 | 46.0 | 3.58e-01 | 90.4% | 98.2% |
| 3941234 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 49.0 | 3.29e-01 | 100.0% | 46.6% |
| 3172580 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 48.0 | 3.10e-01 | 100.0% | 30.4% |
| 5002588 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.54 | 38.0 | 3.07e-01 | 98.8% | 37.6% |
| 4985422 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.54 | 38.0 | 3.11e-01 | 98.8% | 40.0% |
| 4645764 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.53 | 45.0 | 3.53e-01 | 91.6% | 98.3% |
| 4169299 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.53 | 37.0 | 3.40e-01 | 72.3% | 78.9% |
| 4953299 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.53 | 39.0 | 3.18e-01 | 100.0% | 40.5% |
| 3580069 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 41.0 | 2.82e-01 | 95.2% | 42.2% |
| 3625811 | 5.1.4.374 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_THOC3 | 0.50 | 42.0 | 2.95e-01 | 98.8% | 45.3% |
| 3859372 | 9.13.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like | 0.50 | 43.0 | 4.07e-01 | 100.0% | 79.0% |