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OR475265.1__WNM66399.1__SEA_CULVER_129__00121
Bact-VirOR475265.1__WNM66399.1__SEA_CULVER_129__00121
Identity
- Accession:
- OR475265 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Taxonomy
TaxID: 3035370
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81
Domain cluster:
rep: NC_048028.1__YP_009807784.1__HOT82_gp088__00088__D2-89
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l8kA00 | 3.30.1330.220 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Arterivirus nonstructural protein 7 alpha | 0.77 | 41.0 | 3.47e-01 | 70.9% | 33.3% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.75 | 51.0 | 4.46e-01 | 70.9% | 50.4% |
| 1v4pC01 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.70 | 48.0 | 4.31e-01 | 70.9% | 63.0% |
| 4gj4D00 | 3.30.450.260 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem NO binding associated domain | 0.65 | 47.0 | 4.11e-01 | 75.9% | 88.0% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.63 | 43.0 | 3.49e-01 | 70.9% | 64.4% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.57 | 39.0 | 3.59e-01 | 72.2% | 53.2% |
| 2xzmP00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 44.0 | 3.62e-01 | 86.1% | 50.7% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 35.0 | 3.26e-01 | 73.4% | 48.5% |
| 3fgvA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 3.86e-01 | 78.5% | 68.8% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 35.0 | 3.43e-01 | 73.4% | 59.3% |
| 1x8dA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.60e-01 | 73.4% | 62.9% |
| 3qp1A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.54 | 39.0 | 3.09e-01 | 77.2% | 60.7% |
| 5a67A00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.54 | 42.0 | 3.20e-01 | 86.1% | 64.1% |
| 5bmnA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 38.0 | 3.77e-01 | 73.4% | 79.5% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 35.0 | 3.55e-01 | 73.4% | 67.1% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 36.0 | 2.96e-01 | 70.9% | 75.0% |
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.52 | 37.0 | 3.32e-01 | 74.7% | 59.5% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.52 | 40.0 | 3.73e-01 | 86.1% | 64.4% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 35.0 | 2.97e-01 | 70.9% | 68.8% |
| 3so6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.31e-01 | 82.3% | 77.4% |
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.51 | 35.0 | 2.69e-01 | 70.9% | 64.7% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.50e-01 | 73.4% | 69.1% |
| 1cqkA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.35e-01 | 74.7% | 99.0% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.51 | 35.0 | 3.22e-01 | 73.4% | 63.9% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 36.0 | 2.95e-01 | 77.2% | 60.5% |
| 1coyA02 | 3.30.410.10 | Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › Cholesterol Oxidase; domain 2 | 0.50 | 36.0 | 2.93e-01 | 75.9% | 82.6% |
| 2op5B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 37.0 | 3.46e-01 | 78.5% | 70.0% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 38.0 | 3.57e-01 | 82.3% | 66.3% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 160389 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.77 | 52.0 | 4.47e-01 | 70.9% | 48.0% |
| 3639927 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.70 | 49.0 | 4.45e-01 | 74.7% | 73.6% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 47.0 | 4.66e-01 | 72.2% | 65.9% |
| 4257535 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.65 | 44.0 | 3.97e-01 | 70.9% | 52.2% |
| 5006840 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.64 | 46.0 | 3.94e-01 | 75.9% | 100.0% |
| 3210962 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 49.0 | 4.60e-01 | 83.5% | 82.1% |
| 4978147 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 40.0 | 3.88e-01 | 73.4% | 57.8% |
| 3729936 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.62 | 50.0 | 4.67e-01 | 88.6% | 75.0% |
| 3730216 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.62 | 45.0 | 4.38e-01 | 78.5% | 76.7% |
| 4154078 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.61 | 54.0 | 4.01e-01 | 100.0% | 93.0% |
| 4557109 | 2.21.1.1 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB | 0.61 | 44.0 | 3.62e-01 | 75.9% | 73.1% |
| 5061711 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.61 | 38.0 | 3.66e-01 | 73.4% | 53.9% |
| 4973750 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.61 | 39.0 | 4.04e-01 | 70.9% | 69.9% |
| 3969782 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 41.0 | 3.21e-01 | 72.2% | 39.4% |
| 4184401 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 41.0 | 3.24e-01 | 72.2% | 48.8% |
| 4512007 | 223.1.1.58 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › 2CSK_N | 0.58 | 40.0 | 3.20e-01 | 72.2% | 40.6% |
| 3331686 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.58 | 41.0 | 4.00e-01 | 75.9% | 66.7% |
| 5000281 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.58 | 39.0 | 3.89e-01 | 73.4% | 65.9% |
| 4981234 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.57 | 38.0 | 4.05e-01 | 73.4% | 81.5% |
| 4971260 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 41.0 | 3.55e-01 | 77.2% | 66.2% |
| 4995617 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.56 | 41.0 | 3.94e-01 | 77.2% | 82.0% |
| 5016456 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.55 | 39.0 | 3.81e-01 | 73.4% | 77.6% |
| 4889079 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.55 | 45.0 | 4.04e-01 | 87.3% | 71.7% |
| 3942012 | 304.4.1.8 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › rhaM | 0.55 | 38.0 | 3.57e-01 | 73.4% | 61.0% |
| 5044050 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.54 | 42.0 | 3.43e-01 | 87.3% | 61.2% |
| 3255982 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.54 | 41.0 | 3.19e-01 | 84.8% | 54.5% |
| 4093191 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.53 | 37.0 | 3.43e-01 | 73.4% | 72.1% |
| 5021963 | 304.8.1.116 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF3303 | 0.53 | 35.0 | 3.18e-01 | 73.4% | 50.5% |
| 3595211 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.52 | 37.0 | 3.65e-01 | 78.5% | 69.4% |
| 3859170 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.51 | 36.0 | 3.11e-01 | 74.7% | 63.2% |
| 4169955 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.51 | 41.0 | 3.04e-01 | 89.9% | 63.2% |
| 5031804 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.51 | 36.0 | 3.39e-01 | 73.4% | 66.3% |
| 5017989 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.50 | 35.0 | 3.35e-01 | 73.4% | 62.2% |
| 5064269 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.50 | 35.0 | 3.49e-01 | 73.4% | 82.4% |
| 3222359 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.50 | 36.0 | 3.28e-01 | 75.9% | 74.3% |