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OR475266.1__WNM66546.1__SEA_MARTIK_86__00086

Bact-Vir

OR475266.1__WNM66546.1__SEA_MARTIK_86__00086

Identity

Accession:
OR475266 ↗
Kingdom:
phage

Quality

92.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cheoctovirus› Mycobacterium_phage_Martik

TaxID: 3077170

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-55
PDB
Domain cluster: rep: OK040790.1__UDL16018.1__SEA_PUMPERNICKEL_268__00227__D2-58
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 56.0 5.25e-01 100.0% 68.2%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 54.0 5.12e-01 100.0% 69.7%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 5.30e-01 98.1% 91.8%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 58.0 5.28e-01 100.0% 79.5%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.90e-01 100.0% 85.0%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 55.0 4.68e-01 100.0% 61.6%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 55.0 4.76e-01 100.0% 65.1%
3vzbB02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 51.0 3.51e-01 100.0% 95.4%
2dlgA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 42.0 3.70e-01 100.0% 51.2%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 44.0 3.46e-01 100.0% 39.3%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.57e-01 100.0% 100.0%
3bjsA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 41.0 3.25e-01 77.8% 67.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.13e-01 100.0% 72.3%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 46.0 4.07e-01 100.0% 58.7%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.56 47.0 3.92e-01 100.0% 53.1%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.56 46.0 3.65e-01 100.0% 44.1%
3b8fB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.56 46.0 3.39e-01 100.0% 34.5%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 47.0 3.31e-01 100.0% 30.2%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.55 40.0 3.16e-01 87.0% 94.5%
2x32A00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.55 47.0 3.35e-01 100.0% 87.9%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.00e-01 98.1% 79.7%
4zciA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 47.0 3.89e-01 100.0% 55.4%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.54 50.0 3.41e-01 100.0% 37.9%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 44.0 3.44e-01 100.0% 40.3%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.54 50.0 3.42e-01 100.0% 37.1%
1dfuP00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.54 46.0 3.92e-01 100.0% 70.2%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.54 48.0 4.39e-01 100.0% 77.8%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.54 48.0 3.30e-01 100.0% 53.6%
3ghgB02 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.53 44.0 2.92e-01 100.0% 55.7%
1cyyA02 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.53 45.0 3.54e-01 100.0% 90.4%
3q34A00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.53 45.0 3.23e-01 100.0% 87.9%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.53 46.0 4.42e-01 100.0% 87.5%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 40.0 4.09e-01 100.0% 94.3%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 3.93e-01 100.0% 83.3%
6dddH00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.52 44.0 3.77e-01 100.0% 66.7%
3wnkA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 40.0 3.14e-01 100.0% 37.6%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.52 45.0 3.52e-01 100.0% 49.6%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 42.0 3.52e-01 100.0% 52.8%
2d5mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 43.0 3.01e-01 100.0% 28.4%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 45.0 3.19e-01 100.0% 39.2%
2pwyA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.51 45.0 4.43e-01 100.0% 98.2%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 43.0 3.57e-01 100.0% 52.5%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 3.22e-01 100.0% 39.8%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.13e-01 100.0% 34.8%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 45.0 3.12e-01 100.0% 44.3%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.50 39.0 2.97e-01 88.9% 49.6%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.50 34.0 3.70e-01 72.2% 84.8%
2aneH00 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.50 38.0 3.20e-01 90.7% 83.5%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4658938 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.72 56.0 4.69e-01 100.0% 50.0%
4163851 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 56.0 5.44e-01 100.0% 76.7%
4937158 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 51.0 4.94e-01 100.0% 71.7%
4030011 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.68 60.0 5.08e-01 100.0% 74.4%
3511375 4.1.1.349 ↗ beta barrels › SH3 › SH3 › SH3 › ROF 0.66 54.0 4.72e-01 100.0% 58.8%
3883725 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 58.0 4.54e-01 100.0% 95.6%
3536857 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.64 51.0 3.57e-01 100.0% 28.5%
3786396 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.64 57.0 4.28e-01 100.0% 44.6%
3730011 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.63 56.0 4.14e-01 100.0% 40.0%
4519111 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.62 51.0 4.40e-01 100.0% 56.7%
3232582 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 54.0 4.49e-01 100.0% 58.9%
3411284 270.1.1.2 ↗ beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.60 46.0 3.66e-01 83.3% 71.8%
3967986 4.7.1.2 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.60 54.0 4.69e-01 100.0% 70.0%
3612351 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.55e-01 100.0% 86.7%
5007278 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 46.0 3.43e-01 100.0% 35.4%
3415498 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.57 50.0 3.22e-01 100.0% 46.9%
3243970 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 50.0 4.09e-01 100.0% 55.0%
3393354 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.57 48.0 3.28e-01 100.0% 51.2%
3603291 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.56 41.0 3.09e-01 87.0% 92.6%
3911174 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.56 49.0 3.05e-01 100.0% 42.2%
2727964 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.56 43.0 4.22e-01 100.0% 81.4%
3699067 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.56 47.0 3.94e-01 100.0% 57.0%
3366414 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.55 48.0 3.79e-01 100.0% 49.6%
3990594 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.55 47.0 3.22e-01 100.0% 52.6%
4984220 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.55 50.0 3.52e-01 100.0% 39.4%
4983458 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.54 50.0 3.47e-01 100.0% 38.2%
5078549 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.54 50.0 3.46e-01 100.0% 37.5%
5022295 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.54 49.0 3.42e-01 100.0% 36.4%
3723834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.11e-01 100.0% 88.6%
4391792 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.53 45.0 3.85e-01 100.0% 56.8%
4956775 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.53 46.0 3.82e-01 100.0% 57.0%
3499000 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.53 42.0 2.75e-01 94.4% 78.3%
4946209 69.1.1.18 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › DNA_topoisoIV 0.53 49.0 3.20e-01 100.0% 65.9%
3250648 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.53 36.0 3.10e-01 74.1% 91.0%
4993813 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.53 40.0 3.06e-01 90.7% 93.8%
4978263 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.53 48.0 3.35e-01 100.0% 37.0%
4970307 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.37e-01 100.0% 42.6%
4943244 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.52 39.0 2.97e-01 90.7% 95.3%
4299010 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 45.0 3.80e-01 100.0% 56.8%
3409603 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.52 43.0 2.88e-01 100.0% 45.9%
3400588 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.52 45.0 2.82e-01 100.0% 38.7%
3528111 10.21.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 0.52 38.0 3.00e-01 83.3% 35.2%
4998392 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.52 38.0 2.93e-01 87.0% 95.8%
3396269 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.52 42.0 3.02e-01 100.0% 54.5%
5023539 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.51 46.0 3.32e-01 100.0% 36.8%
3517374 269.1.1.1 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C 0.51 42.0 2.84e-01 100.0% 49.4%
3526900 269.1.1.0 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like 0.51 42.0 2.61e-01 100.0% 43.8%
3247872 11.1.1.843 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.51 40.0 3.19e-01 90.7% 91.2%
3205559 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.51 43.0 3.28e-01 100.0% 47.6%
5037092 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.51 35.0 3.31e-01 74.1% 85.7%
4493188 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.51 40.0 3.47e-01 100.0% 52.6%
4997604 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.51 46.0 3.23e-01 100.0% 33.5%
3273875 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.51 43.0 3.56e-01 100.0% 99.0%
5031634 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.51 38.0 2.96e-01 92.6% 90.0%
3391409 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 45.0 3.22e-01 100.0% 36.1%
4353877 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.50 38.0 3.36e-01 100.0% 51.6%
4015757 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 41.0 2.94e-01 100.0% 32.9%
4993128 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.50 38.0 2.93e-01 92.6% 93.1%