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OR475267.1__WNM66585.1__SEA_BLUEHUSK_20__00020
Bact-VirOR475267.1__WNM66585.1__SEA_BLUEHUSK_20__00020
Identity
- Accession:
- OR475267 ↗
- Kingdom:
- phage
Quality
88.9
mean pLDDT
Taxonomy
TaxID: 3077167
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-94
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23859.1 best | DpdA | 129.0 | 2.60e-37 | 97.7% | 26.8% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uniC01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 59.0 | 3.87e-01 | 100.0% | 58.5% |
| 5h7kA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 58.0 | 4.23e-01 | 96.6% | 88.0% |
| 2jieA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 58.0 | 3.75e-01 | 100.0% | 45.2% |
| 2ox1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 58.0 | 4.51e-01 | 100.0% | 44.4% |
| 3ndoA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 57.0 | 4.30e-01 | 100.0% | 53.8% |
| 4aefA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 56.0 | 3.75e-01 | 100.0% | 57.2% |
| 4pcfC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 56.0 | 4.19e-01 | 100.0% | 65.5% |
| 8b73B01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 57.0 | 3.86e-01 | 100.0% | 50.0% |
| 3cj1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 46.0 | 3.87e-01 | 78.4% | 78.8% |
| 1wx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 53.0 | 4.12e-01 | 97.7% | 47.4% |
| 1xpjA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.61 | 44.0 | 3.99e-01 | 76.1% | 69.4% |
| 5e97A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 53.0 | 3.90e-01 | 100.0% | 60.3% |
| 1fhvA01 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.60 | 52.0 | 4.08e-01 | 97.7% | 49.0% |
| 6whjD00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 53.0 | 3.67e-01 | 100.0% | 34.8% |
| 1kfqA01 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.59 | 43.0 | 3.27e-01 | 77.3% | 85.0% |
| 2i71A01 | 3.40.50.10640 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like | 0.59 | 47.0 | 3.58e-01 | 89.8% | 85.7% |
| 6ilsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 51.0 | 3.55e-01 | 100.0% | 32.4% |
| 3rpzA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 51.0 | 3.65e-01 | 100.0% | 36.5% |
| 2abqA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 50.0 | 3.55e-01 | 100.0% | 33.4% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 50.0 | 3.54e-01 | 100.0% | 33.7% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 48.0 | 3.43e-01 | 100.0% | 37.6% |
| 4bqqA01 | 3.40.50.1390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain | 0.55 | 42.0 | 3.69e-01 | 85.2% | 84.3% |
| 3lovA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 47.0 | 3.99e-01 | 100.0% | 76.3% |
| 1f21A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 39.0 | 3.24e-01 | 76.1% | 78.9% |
| 4e19A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 39.0 | 3.41e-01 | 77.3% | 86.5% |
| 2dpmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 45.0 | 3.82e-01 | 100.0% | 97.4% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000158 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 56.0 | 4.01e-01 | 100.0% | 56.1% |
| 3896081 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.62 | 52.0 | 4.00e-01 | 94.3% | 91.0% |
| 3953400 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.62 | 49.0 | 3.83e-01 | 87.5% | 72.7% |
| 4945862 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 51.0 | 4.08e-01 | 94.3% | 96.8% |
| 2625538 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.60 | 53.0 | 3.62e-01 | 100.0% | 32.5% |
| 3259576 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.60 | 53.0 | 3.63e-01 | 100.0% | 36.8% |
| 3705566 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 51.0 | 3.57e-01 | 96.6% | 64.1% |
| 3956765 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.59 | 52.0 | 3.56e-01 | 100.0% | 31.6% |
| 5081296 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.59 | 50.0 | 3.66e-01 | 96.6% | 52.7% |
| 3277812 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.58 | 51.0 | 3.56e-01 | 100.0% | 33.8% |
| 5051580 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.58 | 50.0 | 4.00e-01 | 97.7% | 82.2% |
| 3218973 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.58 | 45.0 | 3.51e-01 | 86.4% | 73.8% |
| 3176308 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.58 | 50.0 | 3.51e-01 | 100.0% | 64.5% |
| 3249053 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.57 | 49.0 | 3.75e-01 | 96.6% | 84.8% |
| 3687204 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 49.0 | 3.80e-01 | 100.0% | 92.6% |
| 5050491 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.55 | 47.0 | 3.47e-01 | 100.0% | 62.6% |
| 182717 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.55 | 47.0 | 3.36e-01 | 100.0% | 38.0% |
| 5079189 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 41.0 | 3.49e-01 | 79.5% | 69.2% |
| 3588773 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 48.0 | 3.27e-01 | 100.0% | 66.0% |
| 5030440 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.53 | 44.0 | 3.44e-01 | 96.6% | 79.5% |
| 4962202 | 2484.1.1.49 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N | 0.53 | 46.0 | 4.03e-01 | 97.7% | 78.5% |
| 4994951 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.53 | 37.0 | 3.32e-01 | 73.9% | 56.9% |
| 4379385 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.53 | 42.0 | 2.98e-01 | 86.4% | 92.4% |
| 5022129 | 2484.1.1.49 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N | 0.53 | 45.0 | 4.04e-01 | 100.0% | 80.7% |
| 5077280 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.52 | 45.0 | 3.54e-01 | 100.0% | 81.0% |
| 5061012 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.51 | 44.0 | 3.54e-01 | 100.0% | 93.7% |
| 5012557 | 2004.1.1.95 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF257 | 0.50 | 43.0 | 3.40e-01 | 100.0% | 73.9% |