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OR475272.1__WNM67143.1__SEA_SCHOMBER_122__00122
Bact-VirOR475272.1__WNM67143.1__SEA_SCHOMBER_122__00122
Identity
- Accession:
- OR475272 ↗
- Kingdom:
- phage
Quality
66.3
mean pLDDT
Taxonomy
TaxID: 3077154
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 42-133
Domain cluster:
rep: NC_004685.1__NP_817877.1__Corndogp026__00026__D17-96
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dlaA01 | 1.20.930.50 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.57 | 47.0 | 3.93e-01 | 90.2% | 58.7% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.57 | 44.0 | 4.21e-01 | 82.6% | 75.7% |
| 1vdyA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 40.0 | 3.52e-01 | 88.0% | 51.4% |
| 3spcA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 37.0 | 3.37e-01 | 71.7% | 92.9% |
| 2rd9B01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.53 | 37.0 | 3.01e-01 | 71.7% | 58.9% |
| 2lsgA00 | 1.20.58.1280 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA repair protein Rev1, C-terminal domain | 0.51 | 39.0 | 3.85e-01 | 98.9% | 78.4% |
| 1ysyA00 | 1.10.8.370 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › nsp7 replicase | 0.51 | 39.0 | 4.10e-01 | 100.0% | 89.4% |
| 1zoyA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.51 | 37.0 | 3.42e-01 | 76.1% | 59.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3954362 | 1022.2.1.1 ↗ | alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib | 0.69 | 58.0 | 5.47e-01 | 91.3% | 80.9% |
| 142419 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.63 | 54.0 | 3.90e-01 | 93.5% | 65.5% |
| 3480640 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.58 | 49.0 | 3.40e-01 | 92.4% | 53.8% |
| 3205024 | 109.4.1.1715 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TANGO6 | 0.56 | 45.0 | 3.09e-01 | 87.0% | 67.0% |
| 3283505 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.55 | 39.0 | 4.01e-01 | 87.0% | 76.7% |
| 5018052 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.55 | 48.0 | 3.58e-01 | 100.0% | 65.3% |
| 4015399 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.54 | 37.0 | 3.83e-01 | 97.8% | 75.3% |
| 3632510 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.52 | 36.0 | 3.57e-01 | 76.1% | 67.0% |
| 3930276 | 859.1.1.0 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 | 0.51 | 42.0 | 3.22e-01 | 89.1% | 99.1% |