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OR475279.1__WNM67639.1__SEA_DROPSHOT_1__00001

Bact-Vir

OR475279.1__WNM67639.1__SEA_DROPSHOT_1__00001

Identity

Accession:
OR475279 ↗
Kingdom:
phage

Quality

76.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-74
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 67.0 6.38e-01 78.6% 70.8%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 63.0 5.97e-01 78.6% 64.2%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 71.0 7.23e-01 89.3% 96.3%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 66.0 6.76e-01 82.1% 96.3%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 62.0 5.93e-01 78.6% 73.4%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 59.0 5.96e-01 76.8% 75.0%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.82 73.0 6.04e-01 96.4% 77.7%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 58.0 5.92e-01 78.6% 76.4%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 5.54e-01 78.6% 73.9%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 58.0 5.86e-01 83.9% 82.1%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.76 62.0 6.22e-01 91.1% 96.4%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.75e-01 92.9% 84.8%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.72 55.0 3.88e-01 83.9% 78.6%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.71 55.0 3.65e-01 83.9% 71.5%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.71 57.0 3.81e-01 87.5% 72.0%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 4.42e-01 83.9% 61.4%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 57.0 4.67e-01 92.9% 79.4%
2v9kA01 1.10.10.2050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 48.0 5.05e-01 75.0% 100.0%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 3.87e-01 80.4% 45.3%
7ewfA01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 57.0 3.74e-01 96.4% 40.6%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 3.87e-01 82.1% 35.7%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 54.0 5.31e-01 92.9% 86.9%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.66 55.0 4.71e-01 91.1% 80.9%
3g0oA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.66 50.0 3.90e-01 82.1% 87.6%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 46.0 4.40e-01 75.0% 64.6%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 44.0 4.00e-01 73.2% 52.6%
3b0pA02 1.20.120.1460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.64 45.0 4.12e-01 75.0% 76.0%
1cf7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.57e-01 83.9% 77.6%
1rz4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 3.86e-01 76.8% 48.9%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 3.77e-01 92.9% 64.2%
6i6lA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 50.0 3.24e-01 87.5% 64.0%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 4.19e-01 91.1% 76.8%
5ow2A00 1.10.10.930 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 49.0 4.49e-01 92.9% 71.2%
5j6bD01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.59 41.0 2.70e-01 76.8% 76.7%
3rmqA02 6.10.140.1650 Special › Helix non-globular › Helix Hairpins › 0.56 43.0 4.38e-01 91.1% 94.6%
4p98A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 46.0 3.42e-01 92.9% 40.3%
3ezuA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 44.0 3.09e-01 89.3% 93.4%
4cj0A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.54 47.0 2.80e-01 100.0% 13.9%
4gqoA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 44.0 3.11e-01 100.0% 80.3%
1c5aA00 1.20.91.20 Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system) 0.51 39.0 3.79e-01 87.5% 73.8%
5eghB01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.51 42.0 2.70e-01 92.9% 53.9%
1khdA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.51 41.0 3.54e-01 98.2% 60.0%
4r2fA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 40.0 2.78e-01 87.5% 46.2%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3781517 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 65.0 6.64e-01 75.0% 76.4%
3589001 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 65.0 5.13e-01 78.6% 49.1%
3442013 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.87 74.0 6.08e-01 91.1% 98.9%
3201282 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.86 66.0 6.31e-01 82.1% 72.3%
4212645 101.1.6.31 alpha arrays › HTH › HTH › TrpR › Phage_integrase 0.86 59.0 6.72e-01 71.4% 100.0%
4606105 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.85 77.0 6.18e-01 96.4% 73.0%
4559046 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.85 76.0 6.01e-01 96.4% 69.5%
4270831 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.85 76.0 6.01e-01 96.4% 69.5%
4125972 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.84 76.0 6.10e-01 96.4% 73.0%
4067934 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.84 75.0 6.30e-01 96.4% 83.3%
4102935 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 74.0 5.90e-01 96.4% 69.5%
4346134 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 73.0 5.87e-01 96.4% 70.2%
4659087 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.82 59.0 5.95e-01 76.8% 76.4%
4981564 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 57.0 5.81e-01 73.2% 74.5%
3306164 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.82 62.0 4.89e-01 80.4% 42.7%
3385990 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.82 72.0 5.76e-01 96.4% 69.5%
4031830 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.82 55.0 5.83e-01 71.4% 80.0%
3724374 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.81 62.0 5.61e-01 82.1% 65.3%
3513842 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.81 63.0 5.95e-01 82.1% 73.8%
3280314 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 55.0 5.63e-01 75.0% 74.5%
4210926 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.80 60.0 5.18e-01 80.4% 61.2%
3727715 101.1.2.384 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 0.79 59.0 6.21e-01 78.6% 98.0%
4608916 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 56.0 5.70e-01 78.6% 76.4%
3943148 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.79 59.0 6.20e-01 82.1% 94.0%
3941922 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 65.0 6.60e-01 91.1% 92.7%
4281782 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 53.0 4.84e-01 75.0% 53.3%
3290335 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 57.0 5.41e-01 76.8% 66.2%
4194508 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 55.0 5.62e-01 75.0% 76.4%
5055914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 58.0 5.91e-01 83.9% 81.8%
4968085 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 5.65e-01 82.1% 72.3%
3164420 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.77 60.0 6.11e-01 85.7% 87.3%
3837930 101.1.1.347 alpha arrays › HTH › HTH › Three-helical HTH › Phage_integrase 0.77 53.0 5.43e-01 76.8% 74.5%
3278077 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 67.0 6.61e-01 96.4% 91.7%
4583223 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.77 62.0 6.24e-01 87.5% 89.1%
5080070 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 53.0 5.34e-01 75.0% 72.7%
4539758 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.77 61.0 4.76e-01 87.5% 67.5%
3602804 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 55.0 5.73e-01 75.0% 84.0%
3957642 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 56.0 5.74e-01 82.1% 80.0%
4339388 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.76 58.0 5.56e-01 82.1% 76.9%
5037625 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 59.0 4.75e-01 83.9% 45.7%
3980478 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.76 56.0 4.65e-01 82.1% 45.0%
4958364 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 65.0 5.45e-01 96.4% 61.1%
5012142 101.1.2.205 alpha arrays › HTH › HTH › winged helix domain › PF0610-like_N 0.75 59.0 5.85e-01 85.7% 81.7%
4643518 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.75 59.0 6.00e-01 87.5% 89.1%
3632013 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 59.0 6.17e-01 87.5% 98.0%
2417767 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.75 50.0 4.96e-01 75.0% 66.1%
3515936 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.75 58.0 5.70e-01 85.7% 80.0%
5062917 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 57.0 4.35e-01 83.9% 36.9%
3197445 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 55.0 5.53e-01 83.9% 83.6%
4369472 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.73 57.0 4.63e-01 83.9% 48.6%
5044888 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 57.0 4.23e-01 83.9% 33.6%
4558962 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.73 54.0 5.48e-01 78.6% 80.0%
5027549 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 57.0 5.04e-01 83.9% 58.7%
3588287 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.73 57.0 5.43e-01 85.7% 75.4%
3965313 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.73 57.0 5.78e-01 87.5% 89.1%
3964894 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.73 57.0 4.71e-01 85.7% 80.0%
3279784 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 48.0 4.92e-01 71.4% 72.7%
5077926 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.71 55.0 4.12e-01 83.9% 34.8%
3968456 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 59.0 4.74e-01 91.1% 76.9%
5045965 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.71 61.0 5.04e-01 96.4% 63.0%
4495785 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 51.0 5.15e-01 78.6% 80.0%
4119313 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.68 52.0 5.24e-01 85.7% 85.5%
3963308 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.67 58.0 5.01e-01 100.0% 67.8%
4968863 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 4.87e-01 83.9% 72.3%
4992111 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.65 57.0 4.34e-01 100.0% 51.9%
3167818 101.1.1.207 alpha arrays › HTH › HTH › Three-helical HTH › DUF6581 0.63 52.0 4.42e-01 100.0% 56.2%
4987454 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.62 47.0 4.07e-01 82.1% 66.7%
5027056 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 47.0 4.07e-01 83.9% 53.3%
5051998 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.60 43.0 3.41e-01 80.4% 48.9%
5039571 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.55 42.0 2.91e-01 85.7% 86.5%
D2 medium residues 75-126
PDB
Domain cluster: representative
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.90 79.0 6.81e-01 94.2% 72.7%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.89 80.0 6.99e-01 96.2% 68.5%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.88 77.0 7.06e-01 94.2% 75.4%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.88 69.0 7.13e-01 84.6% 93.8%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.87 70.0 6.48e-01 86.5% 69.2%
6xj1A01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.85 72.0 4.58e-01 94.2% 33.1%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.85 74.0 5.78e-01 96.2% 63.2%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.85 72.0 6.48e-01 94.2% 73.2%
1a36A04 1.10.132.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.84 71.0 4.85e-01 94.2% 28.6%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.84 63.0 5.89e-01 96.2% 65.6%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.84 72.0 5.74e-01 96.2% 66.7%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 71.0 5.62e-01 94.2% 57.7%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.84 74.0 6.05e-01 96.2% 55.6%
3ehfB01 6.10.250.2870 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.83 72.0 5.66e-01 94.2% 54.8%
3n5lA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 70.0 6.79e-01 92.3% 82.5%
1wpbG01 1.10.287.680 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.83 59.0 5.88e-01 96.2% 72.2%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.83 70.0 6.09e-01 96.2% 61.7%
4agsB04 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.82 71.0 5.21e-01 96.2% 73.7%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.82 70.0 5.99e-01 94.2% 79.0%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.82 69.0 6.46e-01 94.2% 81.2%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.82 69.0 6.15e-01 96.2% 68.0%
1x0tA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.81 67.0 6.37e-01 90.4% 86.9%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.81 69.0 6.44e-01 94.2% 90.5%
1wvtA00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.81 72.0 5.09e-01 98.1% 35.1%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.80 68.0 5.83e-01 96.2% 89.4%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.80 71.0 4.80e-01 100.0% 79.3%
4b6xA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 69.0 6.29e-01 96.2% 81.2%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 71.0 5.61e-01 100.0% 49.5%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.79 66.0 4.86e-01 92.3% 40.6%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 68.0 6.11e-01 98.1% 98.6%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.79 67.0 6.49e-01 96.2% 91.4%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.79 65.0 5.44e-01 90.4% 62.1%
2bduA02 1.10.150.340 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain 0.79 64.0 5.63e-01 88.5% 62.2%
1ucuA01 6.10.280.190 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 64.0 5.90e-01 92.3% 91.2%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.78 65.0 6.12e-01 94.2% 87.5%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.78 71.0 5.68e-01 100.0% 53.6%
6t0bc01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.78 63.0 5.54e-01 94.2% 60.3%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 66.0 6.28e-01 94.2% 86.9%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 60.0 4.78e-01 96.2% 42.1%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.77 67.0 5.93e-01 96.2% 67.6%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.77 64.0 6.04e-01 96.2% 84.4%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.76 66.0 5.35e-01 100.0% 51.5%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.75 62.0 4.82e-01 88.5% 45.7%
4hz4A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.75 62.0 4.93e-01 96.2% 83.9%
4a25B01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.74 59.0 4.29e-01 94.2% 30.4%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.72 60.0 4.39e-01 94.2% 77.6%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 57.0 5.06e-01 94.2% 60.3%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.72 57.0 4.72e-01 94.2% 59.2%
2qkdA02 2.60.120.1040 Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain 0.72 61.0 4.55e-01 100.0% 56.4%
2wdqD00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.71 61.0 4.92e-01 100.0% 88.6%
2o7tA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.70 58.0 4.11e-01 100.0% 58.4%
1rtwB00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.69 56.0 3.78e-01 100.0% 23.6%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.69 52.0 5.32e-01 84.6% 88.2%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 57.0 4.04e-01 100.0% 30.9%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.68 53.0 4.43e-01 96.2% 48.5%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 54.0 4.88e-01 94.2% 74.3%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 51.0 4.59e-01 96.2% 61.4%
1b48A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 54.0 4.39e-01 100.0% 54.1%
3k6tB00 1.20.5.4010 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 48.0 4.94e-01 86.5% 93.9%
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.62 55.0 5.08e-01 98.1% 98.5%
2c2lA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 44.0 3.44e-01 82.7% 31.6%
3nrxA00 1.20.58.1520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 50.0 4.00e-01 100.0% 52.8%
2a2cA03 1.20.1440.340 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.61 47.0 3.68e-01 94.2% 58.0%
2x6hA03 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.56 43.0 3.03e-01 92.3% 43.0%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.97 92.0 6.75e-01 100.0% 43.3%
4257759 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.93 78.0 6.32e-01 94.2% 51.1%
3929573 192.8.1.395 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CHDCT2 0.91 79.0 6.57e-01 94.2% 57.6%
4963338 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.90 78.0 7.44e-01 94.2% 81.7%
3545645 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.90 78.0 6.50e-01 94.2% 57.6%
3641527 192.8.1.353 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med10 0.88 74.0 6.31e-01 90.4% 72.5%
4604091 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.87 77.0 6.11e-01 96.2% 64.0%
4567957 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.87 71.0 5.39e-01 88.5% 43.5%
4315986 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.87 77.0 6.29e-01 96.2% 55.6%
4282125 3755.3.1.295 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WWC1 0.87 77.0 4.99e-01 96.2% 58.5%
4507542 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.87 76.0 6.24e-01 96.2% 55.6%
4038138 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.86 76.0 5.52e-01 96.2% 38.5%
5012567 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.85 75.0 5.28e-01 96.2% 34.0%
4009623 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.85 74.0 6.80e-01 94.2% 75.4%
3693258 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.84 74.0 5.68e-01 96.2% 45.5%
3945531 605.1.1.4 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 0.84 70.0 6.33e-01 92.3% 100.0%
2482296 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.84 72.0 5.60e-01 96.2% 61.8%
3167271 192.8.1.385 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med11 0.84 71.0 6.20e-01 96.2% 62.5%
3255703 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.83 76.0 5.87e-01 100.0% 49.5%
3981576 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.83 72.0 4.72e-01 96.2% 56.6%
3944240 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.82 71.0 5.89e-01 96.2% 55.6%
4522608 3812.1.1.15 alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › COX4_pro 0.82 76.0 6.17e-01 100.0% 75.6%
3417475 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.81 72.0 4.14e-01 96.2% 12.0%
3906191 4323.1.1.1 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.81 71.0 4.95e-01 96.2% 32.3%
5013223 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.78 66.0 4.39e-01 94.2% 46.3%
3794577 3331.1.1.14 a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › CHDCT2 0.78 66.0 5.65e-01 96.2% 58.8%
3582204 4323.1.1.2 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.77 64.0 4.95e-01 94.2% 55.7%
4276514 3826.1.1.88 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › CC_BshC 0.73 63.0 5.79e-01 100.0% 74.3%
3919840 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.73 60.0 4.06e-01 100.0% 62.7%
5052910 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 4.73e-01 94.2% 49.1%
4206858 4992.1.1.23 extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.72 57.0 4.56e-01 94.2% 43.5%
3600080 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.71 62.0 3.79e-01 98.1% 23.1%
3387443 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.69 56.0 4.48e-01 96.2% 44.3%
4674184 2004.1.1.798 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_29 0.64 49.0 3.01e-01 94.2% 16.4%