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OR475294.1__WNM69014.1__SEA_TRIBLETROUBLE_73__00073

Bact-Vir

OR475294.1__WNM69014.1__SEA_TRIBLETROUBLE_73__00073

Identity

Accession:
OR475294 ↗
Kingdom:
phage

Quality

80.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-139
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23811.2 best DUF7183 103.7 1.30e-29 100.0% 45.6%
D2 medium residues 7-65
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23811.2 best DUF7183 72.4 5.90e-20 100.0% 37.6%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.84 61.0 5.18e-01 76.3% 81.3%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.73 50.0 4.30e-01 72.9% 48.9%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.73 51.0 4.30e-01 74.6% 46.0%
2mabA00 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.71 50.0 4.14e-01 78.0% 41.3%
4didB01 1.20.58.450 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cell division control protein 42 homolog 0.71 49.0 4.01e-01 76.3% 38.6%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 48.0 4.05e-01 71.2% 54.0%
3vasA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.69 56.0 3.53e-01 88.1% 28.7%
3vdpA01 1.10.8.420 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecR Domain 1 0.67 42.0 4.42e-01 83.1% 71.2%
3ermB00 1.10.10.710 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like 0.67 52.0 5.13e-01 84.7% 84.4%
1n5uA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.67 58.0 4.80e-01 96.6% 66.0%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.67 55.0 4.69e-01 91.5% 59.8%
2lyyA00 1.10.287.3020 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 47.0 4.02e-01 74.6% 45.8%
4nv1E01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.66 47.0 3.29e-01 74.6% 50.5%
1ufhA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 50.0 3.72e-01 84.7% 45.8%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.64 45.0 3.40e-01 74.6% 55.8%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 43.0 3.90e-01 71.2% 50.6%
1i5nB00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.64 51.0 4.03e-01 86.4% 80.6%
3k3uA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 50.0 3.88e-01 88.1% 96.4%
3cjlA00 3.10.20.850 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 0.63 49.0 4.37e-01 88.1% 83.0%
4dxkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 45.0 3.50e-01 76.3% 76.0%
2q0yA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 48.0 3.73e-01 86.4% 49.3%
4v19W00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.62 46.0 3.31e-01 79.7% 51.8%
3c18A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.61 46.0 3.63e-01 78.0% 42.4%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 41.0 3.90e-01 71.2% 95.8%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.60 41.0 4.15e-01 71.2% 74.6%
2wcjA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.58 50.0 3.79e-01 94.9% 48.2%
1w8iA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.58 46.0 3.35e-01 88.1% 32.5%
3n5lA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 41.0 4.19e-01 74.6% 80.7%
3i2fA02 1.10.3020.10 Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) 0.57 39.0 3.41e-01 76.3% 44.2%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 35.0 3.42e-01 72.9% 55.2%
3a9zA02 1.10.260.50 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.56 40.0 3.45e-01 74.6% 48.9%
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.56 39.0 3.82e-01 74.6% 86.6%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.56 43.0 3.50e-01 83.1% 62.9%
1lwbA00 1.20.90.10 Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain 0.55 46.0 3.69e-01 94.9% 71.3%
3l4aA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.54 38.0 3.10e-01 76.3% 45.5%
1fadA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.54 36.0 3.21e-01 71.2% 68.4%
3j27A05 1.20.1280.260 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.54 40.0 3.49e-01 84.7% 63.0%
5vjhB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 45.0 3.11e-01 96.6% 58.7%
2ziuA02 1.10.150.670 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Crossover junction endonuclease EME1, DNA-binding domain 0.52 41.0 3.79e-01 91.5% 79.5%
1exzB00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 45.0 3.39e-01 96.6% 74.3%
2ziwB02 1.10.150.670 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Crossover junction endonuclease EME1, DNA-binding domain 0.51 42.0 3.67e-01 96.6% 66.3%
3qc1A01 1.25.40.540 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family 0.51 46.0 3.36e-01 100.0% 90.1%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3425308 101.1.1.351 alpha arrays › HTH › HTH › Three-helical HTH › SWIRM-assoc_1 0.84 61.0 5.45e-01 76.3% 56.2%
2984622 3396.1.1.1 extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG_1_N 0.84 60.0 5.73e-01 76.3% 65.2%
3497137 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.84 63.0 3.90e-01 79.7% 29.7%
4023905 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.83 53.0 3.63e-01 72.9% 20.0%
4434184 1023.1.1.1 beta barrels › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › ZapC_N 0.81 55.0 4.75e-01 78.0% 46.7%
3304001 1075.5.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.78 56.0 4.20e-01 76.3% 45.0%
3731146 109.4.1.255 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_22 0.77 54.0 3.90e-01 72.9% 28.4%
3482354 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.76 57.0 4.09e-01 79.7% 28.8%
3583953 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.76 53.0 3.45e-01 74.6% 17.0%
3665480 109.4.1.1559 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tic110 0.73 52.0 3.37e-01 76.3% 16.8%
4996734 3352.1.1.2 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 0.71 51.0 3.16e-01 76.3% 66.6%
3320423 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.70 49.0 4.23e-01 76.3% 49.0%
3999761 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 59.0 4.52e-01 94.9% 97.8%
3518918 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.69 51.0 4.71e-01 78.0% 66.7%
5017220 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 4.83e-01 76.3% 72.3%
5006130 7518.1.1.6 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_A 0.69 47.0 3.93e-01 72.9% 57.3%
5017845 632.7.1.67 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › YetF_N 0.69 50.0 4.44e-01 78.0% 77.6%
3252439 198.1.1.10 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin 0.68 52.0 4.82e-01 86.4% 71.2%
3939577 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.67 59.0 4.04e-01 100.0% 40.0%
3568854 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.67 49.0 4.57e-01 78.0% 65.3%
3846955 198.1.1.10 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin 0.67 49.0 4.47e-01 78.0% 61.3%
3798489 164.1.1.0 alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II 0.67 56.0 4.68e-01 96.6% 58.2%
3511084 3922.1.1.225 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF842 0.66 46.0 3.68e-01 74.6% 93.6%
4011377 3343.1.1.0 alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) 0.66 58.0 3.31e-01 100.0% 9.5%
3309541 5063.1.1.17 alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Gly-zipper_YMGG 0.66 46.0 4.64e-01 76.3% 80.0%
4033037 632.19.1.3 alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 0.66 47.0 4.49e-01 76.3% 82.9%
5046309 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.65 53.0 4.48e-01 86.4% 92.6%
4015038 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.65 49.0 2.83e-01 84.7% 22.4%
3799156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 52.0 4.91e-01 91.5% 95.9%
4663861 5069.1.3.78 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › MIS13 0.63 53.0 4.84e-01 94.9% 81.2%
3575812 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.63 47.0 4.20e-01 84.7% 56.5%
3568856 198.1.1.1 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.63 46.0 4.02e-01 78.0% 52.2%
5029480 1075.5.1.8 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 0.63 45.0 3.11e-01 76.3% 86.1%
4213972 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.63 41.0 3.64e-01 72.9% 45.9%
3680918 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.62 44.0 4.31e-01 74.6% 75.4%
3249906 198.1.1.3 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 0.62 52.0 4.67e-01 96.6% 68.2%
4968943 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.62 44.0 3.91e-01 74.6% 57.6%
4938165 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.62 55.0 4.80e-01 100.0% 72.2%
4677656 198.1.1.8 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapA+SapB_2+SapB_1 0.61 46.0 3.82e-01 83.1% 50.0%
5063791 1075.3.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.61 46.0 2.92e-01 83.1% 32.5%
3805085 611.8.1.0 alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 0.59 46.0 3.47e-01 86.4% 71.6%
3726041 3831.1.1.0 alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 0.59 43.0 3.66e-01 76.3% 62.1%
5035414 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.57 50.0 4.35e-01 98.3% 71.1%
3893015 5058.1.1.46 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › TSNAXIP1_N 0.55 45.0 4.36e-01 100.0% 98.6%
3743497 2004.5.1.11 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › SPA 0.54 46.0 3.12e-01 93.2% 72.1%
409651 108.2.1.1 alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP 0.54 38.0 3.15e-01 76.3% 47.8%
4994898 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.52 43.0 3.93e-01 100.0% 75.3%