←Back to structures

OR500351.1__WNL50893.1__Murka_0057__00057

Bact-Vir

OR500351.1__WNL50893.1__Murka_0057__00057

Identity

Accession:
OR500351 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Foxunavirus› Xanthomonas_phage_Murka

TaxID: 3072303

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-228
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.81 61.0 6.69e-01 100.0% 91.3%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.80 56.0 6.45e-01 100.0% 94.8%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.79 56.0 6.54e-01 100.0% 98.0%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.78 64.0 6.79e-01 100.0% 95.6%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.76 47.0 5.42e-01 100.0% 82.6%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.72 43.0 5.25e-01 92.7% 90.2%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.65 60.0 5.39e-01 100.0% 98.6%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.64 58.0 5.90e-01 100.0% 97.1%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.61 56.0 5.46e-01 100.0% 98.7%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.60 39.0 3.41e-01 95.1% 43.8%
4afkA00 2.40.160.100 Mainly Beta › Beta Barrel › Porin › 0.59 50.0 3.84e-01 96.6% 41.6%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.58 53.0 4.61e-01 99.5% 91.2%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.57 54.0 4.69e-01 100.0% 90.4%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.57 53.0 4.09e-01 99.5% 73.4%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 31.0 3.85e-01 98.0% 83.5%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.57 39.0 3.07e-01 78.0% 35.1%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.56 51.0 4.05e-01 99.5% 76.1%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.56 51.0 5.10e-01 99.0% 97.7%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.55 51.0 4.59e-01 99.5% 90.7%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.55 37.0 4.17e-01 100.0% 87.5%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.55 51.0 4.78e-01 100.0% 97.2%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.54 36.0 3.35e-01 95.6% 53.2%
3bryA00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.54 49.0 3.97e-01 99.5% 76.9%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 25.0 3.35e-01 94.6% 86.5%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 45.0 3.17e-01 92.2% 75.0%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.52 35.0 3.97e-01 92.2% 90.3%
3p02A02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.52 39.0 4.32e-01 100.0% 98.1%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 45.0 3.30e-01 92.2% 41.6%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 45.0 3.26e-01 92.2% 45.7%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.51 39.0 3.12e-01 92.7% 42.0%
5fokA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 44.0 3.28e-01 93.2% 58.6%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 44.0 3.05e-01 90.2% 67.8%
2rckA01 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.51 46.0 4.57e-01 100.0% 92.2%
2xmxA02 3.30.450.400 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Colicin M, catalytic domain 0.51 31.0 3.74e-01 78.5% 93.1%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.51 44.0 3.60e-01 91.2% 69.4%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.50 41.0 3.15e-01 92.7% 39.2%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.50 42.0 4.19e-01 100.0% 85.3%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.50 44.0 3.63e-01 94.1% 96.5%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
145377 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.82 57.0 6.58e-01 100.0% 95.4%
3980016 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.81 54.0 6.43e-01 96.1% 97.9%
3838398 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.80 61.0 6.52e-01 100.0% 88.9%
3838035 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.74 64.0 6.50e-01 99.5% 91.0%
3977398 5084.1.1.16 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.74 57.0 6.35e-01 100.0% 100.0%
4417262 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.74 57.0 6.30e-01 100.0% 97.0%
4464084 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.74 71.0 6.99e-01 100.0% 95.3%
5027751 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.74 53.0 6.09e-01 100.0% 98.7%
3837948 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.74 62.0 6.41e-01 99.0% 92.6%
3838829 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.73 61.0 6.44e-01 100.0% 95.7%
4301927 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.72 69.0 6.67e-01 100.0% 91.7%
4643725 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.72 69.0 6.88e-01 100.0% 97.6%
4552003 5084.1.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpW 0.71 63.0 6.33e-01 100.0% 90.9%
141724 5084.1.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpW 0.70 64.0 6.35e-01 100.0% 93.3%
4531587 5084.1.1.35 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 0.70 67.0 6.46e-01 100.0% 92.9%
4279299 5084.1.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.69 57.0 6.05e-01 100.0% 96.1%
4197411 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.69 60.0 6.08e-01 100.0% 94.0%
3839724 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.68 64.0 6.14e-01 100.0% 97.4%
3838975 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.68 56.0 5.90e-01 100.0% 95.7%
3839919 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.68 65.0 6.35e-01 100.0% 95.9%
3506244 5084.1.1.16 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.68 54.0 5.87e-01 99.5% 98.3%
3838195 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.67 62.0 5.99e-01 100.0% 97.0%
5081121 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.66 54.0 5.82e-01 98.5% 98.3%
3326287 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.66 35.0 4.57e-01 94.6% 88.3%
3838496 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.64 60.0 5.87e-01 100.0% 98.7%
3808882 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.64 45.0 4.81e-01 93.2% 82.3%
200662 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.63 58.0 5.85e-01 100.0% 96.6%
4039744 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 54.0 4.62e-01 96.6% 59.1%
4356082 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 52.0 4.42e-01 96.6% 56.1%
4278291 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 52.0 4.46e-01 96.6% 58.5%
4437932 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.60 51.0 4.37e-01 96.6% 56.1%
4162922 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.60 51.0 4.40e-01 96.6% 58.7%
4450761 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.59 51.0 4.29e-01 95.6% 55.1%
3979621 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 50.0 4.36e-01 96.6% 60.7%
4345340 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 51.0 4.52e-01 94.1% 95.3%
3978611 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 54.0 4.63e-01 100.0% 85.9%
4136508 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 51.0 4.37e-01 95.1% 92.7%
4102065 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 50.0 4.58e-01 93.7% 86.5%
4217278 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 51.0 4.39e-01 95.1% 93.5%
382272 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 53.0 4.57e-01 99.5% 89.2%
1294369 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 54.0 4.69e-01 100.0% 90.4%
4234836 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 52.0 4.52e-01 97.1% 90.5%
4009143 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 54.0 4.50e-01 100.0% 88.9%
3966027 5084.5.4.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.57 53.0 4.07e-01 99.5% 73.6%
4636176 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 51.0 4.34e-01 96.6% 60.7%
3386238 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 52.0 4.49e-01 98.5% 81.2%
None — 0.56 51.0 4.05e-01 99.5% 76.1%
139764 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 52.0 4.72e-01 100.0% 84.6%
4652602 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.55 50.0 4.33e-01 98.5% 91.3%
4419134 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.55 50.0 4.44e-01 98.5% 82.4%
4020798 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.55 44.0 4.13e-01 82.9% 89.0%
4195943 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.54 48.0 4.10e-01 95.6% 93.3%
1558583 5084.5.4.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › CymA 0.52 45.0 3.88e-01 92.2% 59.4%
3332730 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.52 45.0 3.73e-01 93.7% 60.7%
3164364 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.52 48.0 4.28e-01 100.0% 84.1%
2834683 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.52 43.0 3.55e-01 89.3% 70.7%
2103480 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.52 46.0 4.16e-01 99.5% 94.8%
4490044 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.51 47.0 4.20e-01 98.5% 78.6%
1761798 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.51 45.0 3.26e-01 92.2% 45.7%
4524066 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.51 45.0 3.20e-01 92.2% 46.6%
4371295 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.51 42.0 3.08e-01 92.7% 33.7%
1758278 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.51 44.0 3.20e-01 92.2% 49.4%
3971477 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.51 44.0 3.13e-01 93.2% 35.0%
1760440 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.51 45.0 3.30e-01 93.2% 43.4%