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OR509539.1__WNV46185.1__X__00030
Bact-VirOR509539.1__WNV46185.1__X__00030
Identity
- Accession:
- OR509539 ↗
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Taxonomy
TaxID: 3076807
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-49
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.66 | 40.0 | 3.86e-01 | 97.9% | 51.8% |
| 2xrfC00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.66 | 48.0 | 3.01e-01 | 81.2% | 81.5% |
| 1w6kA01 | 6.20.120.20 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 36.0 | 3.56e-01 | 79.2% | 50.0% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 44.0 | 3.59e-01 | 87.5% | 37.9% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.62 | 38.0 | 3.66e-01 | 85.4% | 50.9% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.61 | 43.0 | 3.15e-01 | 75.0% | 82.4% |
| 1z2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 42.0 | 2.93e-01 | 77.1% | 97.0% |
| 1yfbA00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.59 | 34.0 | 3.35e-01 | 81.2% | 46.2% |
| 3sooA01 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.58 | 33.0 | 3.02e-01 | 85.4% | 36.2% |
| 3sfvB01 | 3.30.450.390 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 41.0 | 2.91e-01 | 87.5% | 25.4% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 39.0 | 2.80e-01 | 72.9% | 37.3% |
| 3df8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 3.12e-01 | 87.5% | 33.9% |
| 4yg6B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 3.30e-01 | 97.9% | 53.4% |
| 2h84A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 39.0 | 2.79e-01 | 72.9% | 38.5% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 3.20e-01 | 79.2% | 37.8% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.55 | 40.0 | 2.81e-01 | 83.3% | 79.3% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.55 | 44.0 | 2.51e-01 | 93.8% | 72.1% |
| 5cygB00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.54 | 45.0 | 2.86e-01 | 100.0% | 35.7% |
| 1nxmA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 37.0 | 2.55e-01 | 75.0% | 36.1% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 43.0 | 2.69e-01 | 93.8% | 33.0% |
| 1kqrA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 38.0 | 2.89e-01 | 89.6% | 53.1% |
| 7yj5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 39.0 | 2.75e-01 | 79.2% | 27.1% |
| 5n1qB02 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.16e-01 | 95.8% | 32.0% |
| 1tedA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 39.0 | 2.85e-01 | 81.2% | 28.2% |
| 1s7iA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.52 | 39.0 | 3.00e-01 | 83.3% | 80.6% |
| 1k28D02 | 3.55.50.20 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.52 | 42.0 | 3.58e-01 | 97.9% | 72.7% |
| 1ckeA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 36.0 | 2.45e-01 | 75.0% | 40.6% |
| 3g1nA02 | 3.30.2160.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.51 | 36.0 | 3.15e-01 | 77.1% | 53.8% |
| 1uhvA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 43.0 | 2.65e-01 | 97.9% | 47.1% |
| 2memA00 | 3.90.1150.190 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › SLED domain | 0.51 | 40.0 | 3.10e-01 | 100.0% | 36.1% |
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 36.0 | 2.66e-01 | 79.2% | 26.8% |
| 3aleA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 41.0 | 3.00e-01 | 100.0% | 31.5% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.50 | 37.0 | 2.24e-01 | 81.2% | 45.5% |
| 4i62A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 43.0 | 3.14e-01 | 100.0% | 89.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3952617 | 101.1.2.508 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25872 | 0.76 | 40.0 | 3.11e-01 | 89.6% | 24.0% |
| 3405674 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.66 | 38.0 | 3.61e-01 | 100.0% | 47.3% |
| 5049862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 43.0 | 2.93e-01 | 72.9% | 64.0% |
| 4945010 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 49.0 | 2.99e-01 | 91.7% | 46.4% |
| 157022 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.61 | 49.0 | 2.92e-01 | 93.8% | 16.2% |
| 3587660 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.61 | 42.0 | 3.01e-01 | 72.9% | 27.1% |
| 3707684 | 243.11.1.0 ↗ | a+b two layers › Cystatin-like › NP_346341.1 protein › NP_346341.1 protein | 0.61 | 43.0 | 3.96e-01 | 77.1% | 90.8% |
| 4268395 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.60 | 41.0 | 3.35e-01 | 72.9% | 41.6% |
| 3585742 | 102.1.2.18 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › OGG_N | 0.58 | 48.0 | 3.10e-01 | 97.9% | 44.1% |
| 5031247 | 3755.3.1.127 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › NFACT_N | 0.57 | 39.0 | 2.68e-01 | 70.8% | 22.9% |
| 3214800 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.57 | 38.0 | 4.06e-01 | 93.8% | 85.0% |
| 4182095 | 2004.1.1.80 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin | 0.54 | 41.0 | 2.63e-01 | 81.2% | 76.8% |
| 3280865 | 11.9.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase | 0.54 | 38.0 | 2.45e-01 | 79.2% | 84.9% |
| 3581101 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.53 | 44.0 | 3.11e-01 | 97.9% | 64.1% |
| 3703262 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.53 | 40.0 | 3.31e-01 | 91.7% | 72.4% |
| 3598294 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.53 | 39.0 | 3.14e-01 | 91.7% | 43.2% |
| 2754825 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.52 | 41.0 | 2.51e-01 | 100.0% | 18.4% |
| 3367891 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.52 | 36.0 | 2.25e-01 | 77.1% | 11.9% |
| 3808578 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 39.0 | 3.37e-01 | 81.2% | 59.5% |
| 4582420 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.51 | 37.0 | 3.03e-01 | 79.2% | 91.6% |
| 1288499 | 110.3.1.1 ↗ | alpha arrays › DEATH domain › SLED domain › SLED domain › SLED | 0.51 | 40.0 | 3.10e-01 | 100.0% | 36.1% |
| 3960676 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.51 | 44.0 | 2.71e-01 | 100.0% | 26.4% |
| 4030511 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.02e-01 | 91.7% | 62.4% |
| 4797400 | 220.3.1.5 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop_FD, PH_Rhabdo_glycop | 0.50 | 36.0 | 3.70e-01 | 77.1% | 83.3% |