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OR513085.1__WNN12387.1__MA9V2_138__00138
Bact-VirOR513085.1__WNN12387.1__MA9V2_138__00138
Identity
- Accession:
- OR513085 ↗
- Kingdom:
- phage
Quality
69.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-88
Domain cluster:
rep: BML_coassembly_scaffold_37_prodigal-single.1__X__X__00015__D2-73
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.72 | 65.0 | 6.44e-01 | 100.0% | 93.5% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.67 | 47.0 | 5.09e-01 | 81.6% | 90.1% |
| 2zw2A00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.66 | 47.0 | 4.78e-01 | 73.6% | 100.0% |
| 1gtdA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.64 | 44.0 | 4.60e-01 | 71.3% | 100.0% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.64 | 45.0 | 4.75e-01 | 85.1% | 84.2% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 39.0 | 3.74e-01 | 78.2% | 55.1% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 42.0 | 4.34e-01 | 77.0% | 79.7% |
| 5cadA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 34.0 | 2.68e-01 | 74.7% | 25.8% |
| 3zjbA00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.60 | 41.0 | 3.27e-01 | 70.1% | 43.6% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.60 | 38.0 | 4.37e-01 | 83.9% | 93.3% |
| 4rdlA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.59 | 41.0 | 3.90e-01 | 72.4% | 59.8% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 41.0 | 3.76e-01 | 74.7% | 53.8% |
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.58 | 42.0 | 4.35e-01 | 77.0% | 100.0% |
| 5e1qA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 33.0 | 3.28e-01 | 70.1% | 51.0% |
| 1mt1B00 | 3.50.20.10 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B | 0.57 | 44.0 | 4.17e-01 | 100.0% | 68.8% |
| 1p3cA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 36.0 | 3.43e-01 | 70.1% | 54.3% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.56 | 33.0 | 3.54e-01 | 100.0% | 68.0% |
| 2d73A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 38.0 | 3.52e-01 | 83.9% | 54.0% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 35.0 | 3.35e-01 | 70.1% | 54.3% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.55 | 34.0 | 3.41e-01 | 73.6% | 58.5% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 42.0 | 4.11e-01 | 88.5% | 92.9% |
| 4hsaF02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.53 | 38.0 | 3.58e-01 | 82.8% | 61.9% |
| 2zuoA06 | 2.30.30.560 | Mainly Beta › Roll › SH3 type barrels. › Major vault protein, N-terminal structural repeat domain | 0.53 | 29.0 | 3.60e-01 | 71.3% | 92.2% |
| 1hq6B00 | 3.50.20.10 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B | 0.52 | 45.0 | 3.41e-01 | 100.0% | 39.0% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.52 | 46.0 | 3.86e-01 | 100.0% | 98.7% |
| 2kutA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.31e-01 | 71.3% | 61.3% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.50 | 38.0 | 3.77e-01 | 83.9% | 100.0% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3551719 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.68 | 47.0 | 5.06e-01 | 78.2% | 84.0% |
| 1442393 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 47.0 | 4.38e-01 | 85.1% | 59.6% |
| 3629740 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 45.0 | 4.27e-01 | 72.4% | 61.9% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.64 | 46.0 | 4.86e-01 | 88.5% | 86.7% |
| 3663413 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.64 | 47.0 | 3.85e-01 | 77.0% | 46.5% |
| 5053060 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.63 | 45.0 | 4.47e-01 | 73.6% | 96.7% |
| 4947546 | 304.100.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like | 0.63 | 44.0 | 4.46e-01 | 71.3% | 98.8% |
| 3505613 | 11.1.1.236 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig | 0.61 | 41.0 | 3.94e-01 | 73.6% | 60.0% |
| 3394062 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.61 | 41.0 | 3.49e-01 | 70.1% | 47.2% |
| 5059000 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.61 | 36.0 | 3.56e-01 | 73.6% | 53.7% |
| 3220586 | 11.1.1.1023 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MATH | 0.61 | 44.0 | 4.40e-01 | 75.9% | 73.3% |
| 4128974 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.60 | 45.0 | 4.68e-01 | 88.5% | 86.3% |
| 3226049 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.60 | 43.0 | 3.63e-01 | 74.7% | 49.7% |
| 3884299 | 11.1.1.239 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 | 0.60 | 43.0 | 3.92e-01 | 77.0% | 58.3% |
| 4084879 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.59 | 44.0 | 4.49e-01 | 87.4% | 81.2% |
| 3898917 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 3.50e-01 | 73.6% | 44.3% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 38.0 | 4.50e-01 | 74.7% | 100.0% |
| 2106284 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 40.0 | 4.43e-01 | 77.0% | 98.5% |
| 5032056 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 39.0 | 3.71e-01 | 71.3% | 89.3% |
| 2527501 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 40.0 | 3.86e-01 | 89.7% | 63.5% |
| 3413442 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.56 | 36.0 | 3.64e-01 | 90.8% | 64.7% |
| 3449975 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.55 | 37.0 | 3.29e-01 | 71.3% | 54.1% |
| 4216863 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 38.0 | 3.90e-01 | 73.6% | 75.3% |
| 3449744 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.54 | 30.0 | 3.06e-01 | 100.0% | 51.1% |
| 3613163 | 1116.1.1.0 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain | 0.54 | 39.0 | 3.05e-01 | 75.9% | 55.0% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.54 | 36.0 | 4.09e-01 | 77.0% | 93.8% |
| 3956448 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.54 | 37.0 | 3.88e-01 | 72.4% | 100.0% |
| 5063276 | 302.4.1.2 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › SBP_bac_5 | 0.53 | 37.0 | 3.50e-01 | 73.6% | 61.8% |
| 4014712 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.49e-01 | 75.9% | 65.0% |
| 4459515 | 1144.1.1.1 ↗ | beta sandwiches › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Hydantoinase_B | 0.53 | 38.0 | 2.98e-01 | 75.9% | 59.6% |
| 4028366 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.53 | 35.0 | 3.73e-01 | 95.4% | 79.7% |
| 3909036 | 11.1.1.1056 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M, A2M_BRD, MG3 | 0.52 | 38.0 | 2.35e-01 | 77.0% | 14.5% |
| 3251650 | 10.2.1.84 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Seipin | 0.52 | 37.0 | 3.10e-01 | 73.6% | 79.4% |
| 5005105 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 36.0 | 3.57e-01 | 71.3% | 100.0% |
| 3493644 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.51 | 36.0 | 2.99e-01 | 73.6% | 72.1% |
| 3725766 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.51 | 36.0 | 3.52e-01 | 89.7% | 68.4% |
| 5029082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 40.0 | 3.28e-01 | 88.5% | 73.5% |