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OR513085.1__WNN12423.1__MA9V2_174__00174

Bact-Vir

OR513085.1__WNN12423.1__MA9V2_174__00174

Identity

Accession:
OR513085 ↗
Kingdom:
phage

Quality

92.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chryseobacterium_phage_MA9V-2

TaxID: 3076797

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-105
PDB
Domain cluster: rep: OP753453.1__WAB24442.1__X__00067__D80-189
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03330.25 best DPBB_1 55.1 1.00e-14 92.6% 95.2%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.94 90.0 9.05e-01 98.9% 100.0%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.84 80.0 7.62e-01 100.0% 94.4%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.83 79.0 7.62e-01 100.0% 98.1%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.79 64.0 6.80e-01 98.9% 98.8%
1bw3A00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.77 71.0 6.42e-01 100.0% 96.8%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.76 63.0 6.34e-01 100.0% 87.5%
2g5dA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.73 68.0 5.22e-01 100.0% 51.7%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.73 59.0 5.73e-01 100.0% 77.4%
3czbA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.72 68.0 5.47e-01 100.0% 57.1%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.71 65.0 6.33e-01 100.0% 94.2%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.71 63.0 5.95e-01 96.8% 100.0%
2vpzA05 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 61.0 5.13e-01 98.9% 81.1%
7eu1A01 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.65 59.0 5.14e-01 100.0% 79.6%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 36.0 3.50e-01 100.0% 49.1%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 45.0 4.60e-01 100.0% 76.9%
4gklA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 40.0 4.18e-01 98.9% 73.9%
1qfjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 48.0 4.97e-01 98.9% 96.7%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.57 49.0 4.97e-01 100.0% 98.9%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 49.0 4.97e-01 100.0% 96.9%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 43.0 4.62e-01 98.9% 100.0%
1f94A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.55 27.0 3.26e-01 80.0% 69.8%
1a8pA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 48.0 4.85e-01 100.0% 97.9%
1krhA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 48.0 4.82e-01 100.0% 96.9%
2wpgA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 32.0 3.54e-01 98.9% 73.3%
1miqA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 44.0 3.81e-01 89.5% 76.3%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 47.0 4.55e-01 98.9% 91.5%
5by5A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 39.0 3.70e-01 100.0% 63.5%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 47.0 4.62e-01 100.0% 97.1%
4a0tA03 2.60.320.30 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › 0.53 42.0 4.33e-01 100.0% 90.0%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 46.0 4.50e-01 100.0% 100.0%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.52 36.0 3.99e-01 94.7% 89.6%
7wqxA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.52 35.0 3.39e-01 100.0% 62.3%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 33.0 3.09e-01 100.0% 50.8%
3lzqA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.51 45.0 3.85e-01 98.9% 73.9%
2ed8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.67e-01 96.8% 80.2%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3165363 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.95 92.0 7.35e-01 100.0% 57.6%
4419943 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.94 91.0 8.91e-01 100.0% 95.0%
3974469 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.94 91.0 9.11e-01 100.0% 100.0%
4370157 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.94 90.0 7.63e-01 100.0% 68.5%
3976753 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.90 84.0 7.01e-01 100.0% 62.0%
4880811 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.90 62.0 7.09e-01 71.6% 100.0%
3187650 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.88 83.0 7.72e-01 98.9% 94.8%
4500954 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 63.0 7.11e-01 100.0% 94.7%
4243381 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.88 82.0 8.12e-01 97.9% 95.9%
4396535 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.86 70.0 7.57e-01 100.0% 100.0%
3426007 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.86 82.0 7.35e-01 100.0% 87.2%
4299713 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.86 81.0 7.81e-01 98.9% 95.2%
3274054 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.86 82.0 7.46e-01 100.0% 85.8%
3726745 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 80.0 7.76e-01 98.9% 99.0%
3720989 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 82.0 7.69e-01 100.0% 94.5%
3264281 1.1.2.33 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF29515 0.85 81.0 7.13e-01 100.0% 84.6%
349867 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.84 80.0 7.50e-01 100.0% 91.1%
4115281 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.84 79.0 7.26e-01 98.9% 95.8%
3277741 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.83 80.0 7.37e-01 100.0% 84.3%
3010131 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.83 79.0 7.54e-01 100.0% 94.4%
4586145 1.1.2.3 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin 0.82 67.0 6.62e-01 85.3% 96.0%
4412522 1.1.2.3 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin 0.81 77.0 6.44e-01 100.0% 81.8%
5028227 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 67.0 7.11e-01 97.9% 100.0%
5053341 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.79 69.0 6.85e-01 100.0% 89.0%
5076635 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 67.0 7.04e-01 100.0% 100.0%
5041263 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 66.0 6.96e-01 98.9% 98.8%
4445483 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.79 66.0 6.96e-01 98.9% 98.8%
4200720 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 66.0 6.95e-01 98.9% 98.8%
5053173 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 65.0 6.56e-01 100.0% 87.4%
1883479 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.78 67.0 6.86e-01 100.0% 95.6%
4205030 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 65.0 6.89e-01 98.9% 98.8%
4970084 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 66.0 6.91e-01 96.8% 100.0%
5069203 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 66.0 6.80e-01 100.0% 95.6%
5060583 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.77 64.0 6.81e-01 98.9% 98.8%
5053172 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 63.0 6.70e-01 100.0% 97.6%
4946804 1.1.2.44 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N 0.77 64.0 6.81e-01 100.0% 100.0%
5045002 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 63.0 6.48e-01 98.9% 92.2%
3332068 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 70.0 5.82e-01 97.9% 100.0%
5047687 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 60.0 6.47e-01 93.7% 97.5%
4011221 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 71.0 5.78e-01 100.0% 58.1%
3477728 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.76 66.0 6.65e-01 100.0% 93.7%
5074983 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 63.0 6.52e-01 100.0% 94.4%
3463336 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 71.0 6.97e-01 100.0% 98.0%
3828556 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 70.0 6.02e-01 98.9% 95.7%
4027672 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.75 68.0 6.62e-01 100.0% 88.6%
3605376 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.75 69.0 6.96e-01 100.0% 98.9%
5073963 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 62.0 6.55e-01 96.8% 97.6%
4263053 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 62.0 6.56e-01 98.9% 98.8%
5001338 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.75 66.0 6.67e-01 100.0% 94.7%
3735360 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 69.0 6.52e-01 100.0% 93.6%
3557903 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.74 64.0 6.49e-01 100.0% 93.7%
4021338 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 69.0 6.81e-01 100.0% 96.0%
4145927 1.1.2.6 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 60.0 5.31e-01 100.0% 61.5%
4030729 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.73 68.0 6.62e-01 100.0% 96.2%
4040376 1.1.2.6 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 60.0 5.38e-01 100.0% 63.8%
4087090 1.1.2.6 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 60.0 5.30e-01 100.0% 61.5%
4639326 1.1.2.6 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 60.0 5.72e-01 100.0% 75.5%
3412967 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.73 64.0 6.61e-01 100.0% 100.0%
4245831 1.1.2.6 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 60.0 5.21e-01 100.0% 59.3%
3783660 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 65.0 6.40e-01 100.0% 91.0%
4200338 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 67.0 6.46e-01 98.9% 94.3%
4485138 1.1.2.6 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.73 59.0 5.40e-01 100.0% 66.4%
4013955 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 66.0 6.04e-01 100.0% 96.8%
4890564 101.1.2.869 ↗ alpha arrays › HTH › HTH › winged helix domain › IML1_N 0.72 57.0 6.15e-01 96.8% 98.8%
5053174 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 60.0 6.15e-01 100.0% 94.4%
5008659 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 63.0 5.54e-01 96.8% 93.6%
3169042 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 63.0 6.20e-01 100.0% 91.0%
4990996 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 64.0 5.60e-01 97.9% 92.1%
3391397 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 59.0 6.03e-01 100.0% 94.4%
3406944 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 63.0 5.56e-01 100.0% 70.7%
4944699 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.69 55.0 5.96e-01 96.8% 100.0%
4014411 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 60.0 6.03e-01 100.0% 97.9%
3180110 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.68 58.0 5.48e-01 90.5% 87.3%
5077330 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 62.0 5.97e-01 98.9% 99.0%
4854964 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.57 44.0 4.62e-01 100.0% 91.9%
3255732 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 50.0 5.10e-01 100.0% 97.9%
4060133 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.57 47.0 4.80e-01 100.0% 95.6%
8264 382.1.1.2 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP 0.55 27.0 3.26e-01 80.0% 69.8%
4012402 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.55 48.0 4.52e-01 100.0% 93.3%
3213559 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.54 35.0 3.40e-01 100.0% 59.0%
142515 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.53 47.0 4.57e-01 100.0% 94.4%
5056905 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.51 44.0 4.51e-01 98.9% 100.0%
4236729 10.12.1.33 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ectoine_synth 0.51 37.0 3.32e-01 100.0% 54.1%