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OR515478.1__WNL62958.1__X__00239

Bact-Vir

OR515478.1__WNL62958.1__X__00239

Identity

Accession:
OR515478 ↗
Kingdom:
phage

Quality

78.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Citrobacter_phage_Ci1

TaxID: 3074391

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-112
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rmdA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.58 41.0 3.98e-01 75.7% 75.6%
3ihpA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 44.0 3.84e-01 83.8% 78.4%
4wz0A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 40.0 3.50e-01 73.0% 66.1%
2bayE00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 40.0 4.46e-01 77.0% 100.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 3.82e-01 81.1% 80.3%
4a0gC03 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 36.0 2.59e-01 71.6% 89.7%
3r4cA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 38.0 3.50e-01 91.9% 57.4%
4r7eA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 36.0 3.74e-01 70.3% 91.3%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.89e-01 86.5% 86.4%
2l97A01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 38.0 3.48e-01 81.1% 71.7%
1y2mD01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.50 43.0 3.14e-01 100.0% 100.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3579674 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.60 44.0 3.99e-01 78.4% 68.0%
3718286 376.1.1.8 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.58 29.0 3.05e-01 93.2% 51.4%
4028097 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 39.0 4.10e-01 70.3% 86.8%
4102237 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.57 43.0 3.83e-01 79.7% 72.4%
3263303 376.1.1.70 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Sina_RING 0.57 41.0 3.69e-01 74.3% 65.0%
3907135 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.56 42.0 4.11e-01 79.7% 88.7%
1489496 376.1.1.8 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.56 40.0 3.58e-01 73.0% 71.3%
3711991 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 40.0 3.30e-01 73.0% 48.5%
3760419 376.1.1.45 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-NOSIP 0.56 42.0 3.20e-01 83.8% 41.5%
3592371 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 38.0 3.25e-01 71.6% 51.2%
3805637 376.1.1.61 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.55 42.0 4.12e-01 81.1% 100.0%
3262033 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.55 38.0 3.44e-01 73.0% 62.9%
3577683 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.55 40.0 4.03e-01 78.4% 86.7%
3266881 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.54 40.0 3.82e-01 77.0% 81.2%
4403519 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 2.98e-01 81.1% 32.9%
4645846 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.53 37.0 2.94e-01 81.1% 32.9%
4221024 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.12e-01 90.5% 43.4%
3933620 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 44.0 4.12e-01 100.0% 75.6%
4507638 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 36.0 2.92e-01 78.4% 33.9%
4930596 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 36.0 2.90e-01 81.1% 32.9%
5054122 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 36.0 2.95e-01 78.4% 35.0%
4646072 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 36.0 2.88e-01 81.1% 32.9%
4478999 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 36.0 2.84e-01 82.4% 31.8%
4527101 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.51 36.0 2.93e-01 79.7% 35.6%
4011070 376.1.1.106 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29452 0.51 35.0 3.48e-01 73.0% 77.5%
5042462 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.51 35.0 2.86e-01 81.1% 33.9%
4004116 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.51 35.0 3.24e-01 73.0% 80.0%