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OR515478.1__WNL63121.1__X__00117

Bact-Vir

OR515478.1__WNL63121.1__X__00117

Identity

Accession:
OR515478 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Citrobacter_phage_Ci1

TaxID: 3074391

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 38-116
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23835.2 best DUF7205 40.1 4.30e-10 84.8% 77.4%
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.85 60.0 6.27e-01 82.3% 79.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 56.0 5.99e-01 87.3% 79.7%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 51.0 6.41e-01 74.7% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 51.0 5.65e-01 81.0% 82.8%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.78 47.0 5.65e-01 74.7% 92.3%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 55.0 5.04e-01 82.3% 58.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 53.0 6.09e-01 79.7% 100.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 52.0 5.48e-01 91.1% 77.5%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 57.0 6.38e-01 92.4% 100.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 53.0 5.98e-01 84.8% 96.6%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 46.0 5.61e-01 91.1% 100.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 52.0 5.71e-01 87.3% 90.5%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 55.0 5.75e-01 84.8% 83.6%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.74 65.0 5.28e-01 96.2% 66.2%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 53.0 5.69e-01 89.9% 86.8%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 54.0 5.00e-01 91.1% 62.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 51.0 5.71e-01 92.4% 96.6%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.70 52.0 4.59e-01 77.2% 58.7%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.69 50.0 5.64e-01 86.1% 100.0%
3meuB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.81e-01 91.1% 94.6%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.68 55.0 4.22e-01 96.2% 39.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.68 53.0 5.72e-01 89.9% 98.5%
1vwxY00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 59.0 4.89e-01 93.7% 65.7%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.69e-01 75.9% 86.7%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.28e-01 87.3% 81.0%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 4.66e-01 86.1% 63.4%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.34e-01 96.2% 100.0%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.64 50.0 3.82e-01 84.8% 84.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.07e-01 92.4% 85.4%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 46.0 3.68e-01 75.9% 82.1%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 55.0 4.66e-01 97.5% 85.8%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 56.0 4.61e-01 100.0% 80.1%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 49.0 4.15e-01 86.1% 54.2%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 47.0 3.51e-01 83.5% 100.0%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 51.0 5.25e-01 97.5% 94.7%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 5.08e-01 92.4% 88.0%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 42.0 4.37e-01 92.4% 77.3%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.57 52.0 3.91e-01 100.0% 93.5%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.57 46.0 3.64e-01 91.1% 83.4%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.56 51.0 3.68e-01 100.0% 77.6%
3cawA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 37.0 3.57e-01 70.9% 100.0%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.54 45.0 3.92e-01 91.1% 85.2%
1jyaB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 42.0 3.71e-01 87.3% 87.6%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 43.0 3.56e-01 91.1% 95.2%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.64e-01 92.4% 74.4%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.51 45.0 3.99e-01 97.5% 97.3%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924377 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 56.0 6.59e-01 75.9% 100.0%
3037102 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 54.0 6.01e-01 88.6% 85.5%
3673317 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 55.0 6.54e-01 84.8% 100.0%
4018596 4.1.1.320 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.80 56.0 5.15e-01 89.9% 57.0%
3830187 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 53.0 6.25e-01 84.8% 98.2%
3913334 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 55.0 5.83e-01 82.3% 81.4%
3294392 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.79 54.0 5.28e-01 88.6% 65.9%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 55.0 5.57e-01 84.8% 72.5%
3535278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 53.0 5.97e-01 86.1% 91.7%
3547084 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 55.0 5.30e-01 83.5% 64.4%
3765289 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 54.0 5.22e-01 83.5% 63.3%
3398093 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.78 54.0 6.12e-01 82.3% 95.0%
3597513 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 49.0 5.82e-01 78.5% 92.7%
4002985 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 57.0 6.45e-01 78.5% 100.0%
3688068 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.77 54.0 4.28e-01 87.3% 38.0%
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.77 56.0 5.75e-01 83.5% 80.0%
3883159 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 53.0 5.12e-01 83.5% 64.4%
3547106 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 56.0 5.41e-01 83.5% 68.9%
3222051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 54.0 5.87e-01 82.3% 90.8%
3501337 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.74 58.0 5.80e-01 82.3% 97.5%
3372243 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 60.0 6.01e-01 84.8% 87.5%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.43e-01 82.3% 88.3%
4002896 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 55.0 5.24e-01 84.8% 67.8%
3999725 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 54.0 5.29e-01 83.5% 70.6%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.40e-01 92.4% 74.1%
3840679 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 53.0 4.98e-01 83.5% 63.2%
4317035 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 57.0 5.57e-01 86.1% 76.5%
3541241 4.1.1.8 ↗ beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.73 51.0 5.76e-01 98.7% 96.7%
3996279 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.73 50.0 5.06e-01 75.9% 71.2%
4196537 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.73 54.0 5.60e-01 78.5% 88.0%
3700770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 51.0 5.81e-01 74.7% 96.7%
3781440 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 64.0 6.38e-01 94.9% 100.0%
3765274 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.43e-01 84.8% 73.3%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.10e-01 79.7% 98.9%
3642001 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 54.0 5.71e-01 78.5% 95.7%
3595169 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 60.0 6.31e-01 98.7% 100.0%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.84e-01 91.1% 100.0%
4022025 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.71 57.0 4.60e-01 84.8% 51.7%
3590858 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.60e-01 72.2% 100.0%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.16e-01 83.5% 89.0%
4278184 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.71 55.0 5.52e-01 82.3% 85.0%
3926175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.42e-01 83.5% 77.6%
1527468 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.70 61.0 5.40e-01 93.7% 69.4%
3492982 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.70 51.0 4.19e-01 75.9% 80.0%
3498280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 51.0 4.24e-01 75.9% 83.1%
4929472 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 57.0 5.76e-01 88.6% 91.3%
4220126 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 57.0 5.57e-01 87.3% 90.6%
3600139 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 63.0 5.62e-01 100.0% 90.9%
3662854 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.70 56.0 4.37e-01 86.1% 86.7%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 55.0 5.66e-01 92.4% 89.3%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 57.0 5.37e-01 87.3% 86.3%
3244497 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.69 56.0 4.48e-01 86.1% 72.0%
3630782 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.69 58.0 4.70e-01 89.9% 53.8%
4004815 4.1.1.166 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2314 0.69 55.0 4.73e-01 86.1% 65.0%
3298989 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 4.90e-01 86.1% 61.8%
3936468 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 4.80e-01 83.5% 64.0%
3833030 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.68 55.0 4.55e-01 86.1% 80.7%
3363360 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.68 46.0 4.55e-01 79.7% 65.9%
3727542 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.15e-01 96.2% 75.6%
3576128 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 54.0 4.76e-01 86.1% 73.9%
3801650 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 54.0 5.17e-01 84.8% 83.3%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 58.0 5.67e-01 91.1% 89.4%
3588727 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.60e-01 87.3% 94.3%
3848399 4.8.1.24 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.67 54.0 5.74e-01 93.7% 97.1%
3729666 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.23e-01 97.5% 77.3%
3377696 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.66 48.0 3.55e-01 77.2% 39.0%
3637664 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.65 55.0 4.77e-01 91.1% 64.2%
3588736 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 50.0 5.44e-01 83.5% 98.5%
4555816 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.40e-01 92.4% 87.1%
3587030 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.52e-01 86.1% 97.1%
4114121 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.65 51.0 5.16e-01 84.8% 88.7%
3999723 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 58.0 4.57e-01 97.5% 66.0%
3480659 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.63 54.0 4.30e-01 93.7% 69.0%
3243255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.73e-01 77.2% 89.3%
3797485 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.41e-01 91.1% 76.9%
3702416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 54.0 5.00e-01 100.0% 95.0%
4403870 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.59 48.0 4.51e-01 86.1% 76.8%
4162532 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.59 48.0 4.94e-01 86.1% 96.0%
3225736 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.58 46.0 3.75e-01 86.1% 70.0%
3967745 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.58 47.0 4.89e-01 87.3% 100.0%
3598532 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.57 51.0 3.76e-01 100.0% 89.3%
5018860 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.57 52.0 4.15e-01 100.0% 90.7%
3587732 9.6.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Staphostatin › Staphostatin 0.55 42.0 3.79e-01 82.3% 80.9%
1161129 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.55 45.0 4.02e-01 89.9% 95.5%
3792948 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 38.0 3.50e-01 75.9% 87.3%
3804236 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 46.0 3.83e-01 100.0% 67.1%
3491784 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.52 45.0 3.92e-01 98.7% 78.4%