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OR515478.1__WNL63131.1__X__00127

Bact-Vir

OR515478.1__WNL63131.1__X__00127

Identity

Accession:
OR515478 ↗
Kingdom:
phage

Quality

55.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-61_169-178
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.68 38.0 4.55e-01 78.3% 94.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 42.0 4.22e-01 100.0% 63.8%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.66 41.0 4.70e-01 100.0% 86.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 41.0 4.69e-01 100.0% 91.7%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.64 57.0 4.23e-01 100.0% 83.6%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.64 56.0 4.09e-01 100.0% 82.1%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 56.0 5.21e-01 100.0% 78.2%
1j71A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.63 45.0 3.52e-01 78.3% 88.2%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 40.0 4.67e-01 97.1% 100.0%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 43.0 2.99e-01 76.8% 73.3%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.60 42.0 2.91e-01 72.5% 91.5%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.60 38.0 3.94e-01 72.5% 68.2%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 44.0 3.43e-01 79.7% 92.4%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 43.0 3.27e-01 76.8% 70.8%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.60 42.0 3.84e-01 75.4% 85.6%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 38.0 3.78e-01 81.2% 61.6%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 39.0 3.64e-01 75.4% 52.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 40.0 4.11e-01 97.1% 75.8%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 46.0 2.86e-01 88.4% 31.3%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 43.0 3.15e-01 79.7% 93.0%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 42.0 3.26e-01 79.7% 72.0%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 4.86e-01 94.2% 98.5%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 43.0 4.53e-01 100.0% 93.3%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.56 41.0 4.53e-01 82.6% 100.0%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 48.0 4.23e-01 100.0% 81.5%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 3.91e-01 100.0% 71.8%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 43.0 3.94e-01 85.5% 92.5%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 42.0 4.03e-01 100.0% 71.8%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 3.85e-01 100.0% 70.8%
7c9rH01 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.55 44.0 3.49e-01 88.4% 95.3%
3n4eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 39.0 3.48e-01 75.4% 86.5%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 44.0 4.48e-01 100.0% 91.0%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 41.0 3.42e-01 84.1% 96.9%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 41.0 4.11e-01 100.0% 80.0%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 3.79e-01 100.0% 73.5%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.55e-01 100.0% 62.7%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 41.0 4.03e-01 84.1% 87.8%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.97e-01 89.9% 78.1%
4flnA02 3.20.190.20 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › 0.52 44.0 3.54e-01 100.0% 74.3%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.91e-01 100.0% 87.1%
2auwA01 3.30.2020.10 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › NE0471-like N-terminal domain 0.52 39.0 3.74e-01 82.6% 98.8%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 36.0 3.71e-01 97.1% 78.8%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 37.0 3.80e-01 91.3% 81.8%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 33.0 3.56e-01 98.6% 84.9%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 41.0 2.61e-01 91.3% 23.7%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 42.0 3.90e-01 92.8% 93.2%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.50 35.0 3.00e-01 75.4% 84.1%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 39.0 4.09e-01 92.8% 96.7%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4958385 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.77 40.0 4.99e-01 71.0% 87.5%
3300051 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.72 49.0 4.76e-01 100.0% 64.0%
4027422 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 46.0 5.03e-01 100.0% 81.8%
3342430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 48.0 4.75e-01 100.0% 65.3%
3660755 4.8.1.21 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.71 49.0 4.80e-01 100.0% 66.7%
3577864 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 45.0 4.21e-01 100.0% 52.9%
3660244 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.70 48.0 4.75e-01 100.0% 66.7%
3368254 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.70 48.0 5.21e-01 100.0% 89.1%
3372243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 46.0 4.43e-01 100.0% 61.3%
3299797 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.67 42.0 4.47e-01 100.0% 73.3%
3419491 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 47.0 5.02e-01 100.0% 85.0%
3546607 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 41.0 4.68e-01 100.0% 88.0%
4882420 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 41.0 4.58e-01 98.6% 84.3%
4178260 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.66 57.0 5.39e-01 100.0% 95.3%
3264883 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.65 44.0 4.82e-01 100.0% 87.3%
3546306 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.64 36.0 3.23e-01 76.8% 40.0%
4833642 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 39.0 4.59e-01 98.6% 95.6%
2700914 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.62 41.0 3.90e-01 98.6% 57.5%
4940177 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 46.0 4.64e-01 95.7% 80.0%
3609527 2006.1.1.4 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF 0.62 39.0 2.76e-01 97.1% 21.0%
4368811 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.62 40.0 4.36e-01 100.0% 83.6%
3553983 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.62 43.0 4.51e-01 100.0% 83.3%
3270324 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 40.0 4.50e-01 100.0% 94.0%
4176722 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.60 42.0 3.80e-01 75.4% 84.0%
3998022 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 37.0 3.96e-01 71.0% 76.4%
4041343 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.59 41.0 4.52e-01 98.6% 100.0%
3993048 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.59 35.0 2.98e-01 79.7% 35.5%
3993946 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.59 35.0 4.18e-01 71.0% 100.0%
3554026 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.59 41.0 4.30e-01 100.0% 83.3%
3242411 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.59 43.0 3.72e-01 78.3% 99.1%
3924808 719.2.1.0 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.59 40.0 3.87e-01 72.5% 66.3%
4504019 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 45.0 4.81e-01 92.8% 96.7%
5028741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 38.0 4.17e-01 72.5% 85.5%
3880284 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.58 43.0 3.09e-01 100.0% 26.8%
3485745 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 43.0 4.57e-01 100.0% 93.3%
3520270 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.57 44.0 3.88e-01 85.5% 86.7%
3616007 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.56 36.0 3.97e-01 71.0% 83.6%
4944045 4.17.1.2 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.56 39.0 3.96e-01 100.0% 74.3%
5043533 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 41.0 4.28e-01 100.0% 85.9%
68497 809.2.1.1 a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like 0.56 39.0 4.27e-01 85.5% 92.9%
4001172 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 43.0 4.29e-01 100.0% 81.4%
5056826 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.55 40.0 4.07e-01 100.0% 84.6%
3725260 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 41.0 4.17e-01 100.0% 80.0%
4956223 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.54 39.0 2.60e-01 87.0% 18.0%
3406663 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 37.0 4.16e-01 94.2% 100.0%
3314585 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.54 43.0 2.97e-01 89.9% 85.5%
3025579 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 41.0 4.37e-01 100.0% 98.3%
3414063 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.54 35.0 3.83e-01 71.0% 85.5%
3367301 2.1.1.48 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C 0.53 38.0 4.17e-01 89.9% 100.0%
3531894 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.52 42.0 4.39e-01 100.0% 95.4%
5036086 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 45.0 4.34e-01 100.0% 97.5%
5033001 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.52 37.0 2.67e-01 76.8% 70.2%
2596548 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.52 39.0 3.93e-01 98.6% 81.4%
3839910 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.51 41.0 4.22e-01 89.9% 100.0%
4101587 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.51 44.0 3.86e-01 98.6% 62.9%
4940710 3174.2.1.0 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA 0.51 39.0 4.05e-01 100.0% 89.2%
3775592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 43.0 2.33e-01 100.0% 4.3%
4206425 2.1.1.48 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C 0.51 39.0 4.19e-01 88.4% 100.0%
3788105 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 39.0 2.71e-01 85.5% 42.0%
3574613 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.50 42.0 3.79e-01 100.0% 67.0%
3375819 1.1.1.28 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.50 34.0 2.16e-01 72.5% 38.3%
None 0.50 42.0 2.29e-01 100.0% 5.2%
D2 high residues 65-153
PDB