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OR515479.1__WNL63336.1__X__00078

Bact-Vir

OR515479.1__WNL63336.1__X__00078

Identity

Accession:
OR515479 ↗
Kingdom:
phage

Quality

93.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-92
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6gh3A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.73 60.0 4.08e-01 89.0% 84.9%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.73 59.0 4.65e-01 100.0% 44.1%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.72 43.0 5.14e-01 82.4% 90.0%
4bumX00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 55.0 3.86e-01 84.6% 96.1%
1bt9A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.68 52.0 3.44e-01 79.1% 32.4%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.68 56.0 5.19e-01 89.0% 95.6%
1n9eA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.67 55.0 3.42e-01 87.9% 72.4%
6eheA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.66 54.0 3.80e-01 90.1% 65.2%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.65 56.0 4.01e-01 92.3% 98.4%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 54.0 4.65e-01 93.4% 76.3%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.65 55.0 3.93e-01 91.2% 85.4%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 54.0 4.69e-01 91.2% 93.6%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 52.0 3.63e-01 87.9% 98.7%
3d6xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 53.0 4.65e-01 91.2% 99.3%
3dkzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 52.0 4.67e-01 89.0% 99.2%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.63 53.0 3.89e-01 89.0% 80.5%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 49.0 4.47e-01 85.7% 99.2%
6f91A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.63 53.0 3.72e-01 91.2% 71.9%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.63 47.0 3.18e-01 80.2% 69.0%
4kc5C03 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.63 53.0 3.70e-01 93.4% 47.3%
4afkA00 2.40.160.100 Mainly Beta › Beta Barrel › Porin › 0.62 55.0 3.59e-01 100.0% 51.2%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 49.0 4.13e-01 85.7% 66.7%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.62 55.0 3.79e-01 98.9% 53.2%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.61 51.0 3.69e-01 90.1% 80.9%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.61 43.0 3.59e-01 74.7% 89.2%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.61 54.0 3.57e-01 100.0% 46.3%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 44.0 3.80e-01 78.0% 90.7%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 50.0 4.06e-01 93.4% 85.7%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.60 51.0 4.54e-01 93.4% 86.0%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 53.0 3.57e-01 98.9% 46.2%
2nujA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 41.0 3.47e-01 71.4% 85.1%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 50.0 4.32e-01 94.5% 76.7%
3s4kA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 47.0 4.25e-01 86.8% 96.8%
2lmeA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.58 41.0 3.94e-01 75.8% 62.9%
1nycA00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.58 48.0 4.55e-01 91.2% 91.9%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.58 50.0 3.82e-01 100.0% 94.4%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.56 50.0 3.84e-01 100.0% 94.8%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 42.0 3.79e-01 96.7% 59.2%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 47.0 3.96e-01 100.0% 69.6%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.55 49.0 4.29e-01 98.9% 83.2%
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 45.0 4.25e-01 100.0% 74.3%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 44.0 3.98e-01 97.8% 65.0%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 43.0 2.93e-01 85.7% 49.4%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.54 48.0 3.02e-01 100.0% 59.5%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 47.0 3.55e-01 97.8% 92.5%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 44.0 3.26e-01 96.7% 88.2%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.78e-01 97.8% 60.9%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 47.0 3.11e-01 100.0% 98.9%
4gklA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 37.0 3.82e-01 100.0% 81.8%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4419937 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.76 53.0 5.48e-01 89.0% 76.5%
4466226 5087.1.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.76 52.0 4.94e-01 70.3% 69.5%
3942442 12.3.1.25 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.73 62.0 4.34e-01 91.2% 87.9%
5013018 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.73 52.0 4.57e-01 85.7% 51.5%
3318685 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.72 53.0 5.01e-01 75.8% 89.5%
3812869 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.72 56.0 5.47e-01 82.4% 92.0%
4398256 5087.1.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.72 53.0 4.16e-01 83.5% 38.9%
4362579 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.72 59.0 4.66e-01 86.8% 70.3%
3802306 284.1.2.0 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.72 52.0 5.17e-01 75.8% 90.5%
4248683 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.72 60.0 4.67e-01 89.0% 64.9%
4188109 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.71 56.0 3.81e-01 84.6% 92.8%
2549178 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.71 49.0 4.60e-01 72.5% 94.7%
3596663 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.71 56.0 3.97e-01 85.7% 96.0%
3819740 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.70 49.0 5.02e-01 72.5% 87.8%
4292366 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.70 59.0 4.62e-01 90.1% 71.2%
4028168 5084.5.1.3 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.69 56.0 3.86e-01 85.7% 97.2%
4283763 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.69 58.0 4.06e-01 91.2% 91.5%
2027 12.3.1.17 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › RhgB_N 0.68 54.0 3.88e-01 84.6% 89.2%
3385986 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.68 59.0 4.62e-01 96.7% 91.4%
3695701 5084.5.1.3 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.68 54.0 3.74e-01 85.7% 96.1%
437290 9.2.1.1 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.68 56.0 4.83e-01 89.0% 79.0%
4105670 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.68 53.0 3.60e-01 84.6% 41.2%
4526897 222.1.1.12 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.67 57.0 4.53e-01 92.3% 84.3%
3611395 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.67 61.0 4.94e-01 98.9% 96.4%
3748744 12.3.1.52 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF30771 0.66 51.0 3.87e-01 82.4% 93.5%
4566858 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.66 52.0 3.56e-01 85.7% 41.8%
3287846 222.1.1.5 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FabA 0.65 49.0 4.07e-01 79.1% 80.6%
4268461 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.65 43.0 4.50e-01 70.3% 72.9%
3356246 5084.5.1.45 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28482 0.64 53.0 4.00e-01 90.1% 41.1%
3459971 5084.5.3.9 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › PF28611 0.63 50.0 3.46e-01 96.7% 25.7%
3417002 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 55.0 5.05e-01 96.7% 87.5%
3405242 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.62 51.0 4.09e-01 90.1% 51.9%
5058974 222.1.1.5 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FabA 0.62 47.0 3.97e-01 80.2% 86.0%
3619927 9.2.1.6 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 0.62 54.0 4.96e-01 94.5% 96.5%
3702318 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.62 56.0 4.16e-01 100.0% 91.7%
5038819 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.61 47.0 3.41e-01 81.3% 87.5%
5009702 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.61 50.0 4.35e-01 89.0% 80.7%
3706756 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.61 54.0 3.79e-01 96.7% 38.5%
3784000 12.1.1.23 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.61 42.0 3.81e-01 71.4% 54.2%
3399365 9.2.1.10 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7044 0.61 50.0 4.69e-01 89.0% 96.4%
3838130 5084.5.1.25 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › HP_OMP_2 0.61 54.0 3.43e-01 98.9% 40.3%
4083786 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.60 41.0 4.18e-01 73.6% 71.1%
3965735 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.60 43.0 4.48e-01 74.7% 80.0%
None 0.60 52.0 3.51e-01 95.6% 81.4%
4001579 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 52.0 4.80e-01 94.5% 99.1%
4030444 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 51.0 4.83e-01 94.5% 89.1%
4681168 222.1.1.5 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FabA 0.59 48.0 4.32e-01 91.2% 99.2%
4397319 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.59 49.0 4.22e-01 90.1% 95.0%
3399941 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 50.0 4.55e-01 93.4% 96.7%
3500362 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 49.0 3.52e-01 92.3% 61.9%
3206009 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 46.0 3.25e-01 92.3% 91.7%
1065880 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.56 50.0 3.84e-01 100.0% 94.8%
3990703 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 49.0 4.11e-01 100.0% 83.0%
3343255 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.56 46.0 2.96e-01 92.3% 61.8%
4202520 222.1.1.17 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.56 47.0 4.04e-01 90.1% 92.9%
5036420 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.54 49.0 3.60e-01 100.0% 90.0%
3225806 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 4.26e-01 96.7% 92.5%