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OR515479.1__WNL63410.1__X__00147
Bact-VirOR515479.1__WNL63410.1__X__00147
Identity
- Accession:
- OR515479 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-114
Domain cluster:
rep: AB767244.1__BAM68826.1__X__00005__D107-166
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 62.0 | 6.41e-01 | 100.0% | 93.2% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 59.0 | 5.80e-01 | 100.0% | 79.4% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 57.0 | 5.27e-01 | 100.0% | 65.0% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 64.0 | 5.87e-01 | 100.0% | 75.0% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 57.0 | 5.50e-01 | 100.0% | 74.0% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 63.0 | 6.24e-01 | 96.9% | 97.0% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 60.0 | 6.10e-01 | 98.4% | 95.2% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 55.0 | 5.77e-01 | 100.0% | 96.6% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 59.0 | 5.96e-01 | 100.0% | 98.4% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 54.0 | 5.47e-01 | 92.2% | 96.9% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.66 | 56.0 | 4.11e-01 | 100.0% | 34.5% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 52.0 | 5.34e-01 | 92.2% | 90.3% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.65 | 54.0 | 5.51e-01 | 93.8% | 93.7% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 49.0 | 5.12e-01 | 90.6% | 88.1% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 54.0 | 5.30e-01 | 100.0% | 90.1% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 53.0 | 4.86e-01 | 100.0% | 77.9% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.61 | 54.0 | 4.74e-01 | 100.0% | 67.7% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.61 | 54.0 | 3.75e-01 | 100.0% | 38.8% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 51.0 | 4.86e-01 | 100.0% | 81.8% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 37.0 | 4.10e-01 | 73.4% | 81.6% |
| 1aw8B00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.58 | 46.0 | 4.21e-01 | 100.0% | 63.7% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 42.0 | 4.36e-01 | 78.1% | 90.2% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 38.0 | 3.99e-01 | 81.2% | 75.9% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 45.0 | 3.70e-01 | 90.6% | 95.2% |
| 5gvyA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.56 | 42.0 | 3.32e-01 | 82.8% | 95.9% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.56 | 42.0 | 2.90e-01 | 100.0% | 22.7% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 45.0 | 3.78e-01 | 93.8% | 68.1% |
| 3ayjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 41.0 | 2.59e-01 | 84.4% | 72.8% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 37.0 | 3.24e-01 | 73.4% | 75.0% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 39.0 | 4.19e-01 | 79.7% | 89.3% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 45.0 | 3.91e-01 | 98.4% | 79.8% |
| 1x1fA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 45.0 | 3.50e-01 | 95.3% | 51.7% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.53 | 43.0 | 3.26e-01 | 93.8% | 51.1% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 39.0 | 3.48e-01 | 82.8% | 57.4% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 36.0 | 3.58e-01 | 78.1% | 68.7% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 44.0 | 2.82e-01 | 100.0% | 85.8% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.50e-01 | 81.2% | 64.0% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 45.0 | 3.88e-01 | 100.0% | 73.1% |
| 5vybA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.51 | 44.0 | 3.45e-01 | 100.0% | 69.2% |
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.51 | 35.0 | 3.08e-01 | 81.2% | 45.6% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3294392 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.77 | 59.0 | 5.38e-01 | 100.0% | 62.4% |
| 3622137 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 60.0 | 5.31e-01 | 100.0% | 60.0% |
| 3924377 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 60.0 | 6.39e-01 | 96.9% | 98.2% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 62.0 | 5.90e-01 | 100.0% | 76.0% |
| 3926175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 61.0 | 5.57e-01 | 100.0% | 67.1% |
| 3665882 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.75 | 61.0 | 4.72e-01 | 100.0% | 41.5% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 58.0 | 6.04e-01 | 92.2% | 91.4% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 59.0 | 5.16e-01 | 100.0% | 57.9% |
| 3393358 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 62.0 | 5.42e-01 | 100.0% | 62.1% |
| 4132516 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.72 | 63.0 | 5.84e-01 | 100.0% | 77.5% |
| 4943273 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 56.0 | 5.63e-01 | 96.9% | 84.6% |
| 3559960 | 2006.1.6.66 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 | 0.71 | 62.0 | 6.03e-01 | 100.0% | 87.1% |
| 3814411 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 61.0 | 5.17e-01 | 100.0% | 58.1% |
| 3631298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 62.0 | 5.89e-01 | 96.9% | 85.3% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 53.0 | 5.37e-01 | 92.2% | 80.0% |
| 157526 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 61.0 | 6.18e-01 | 95.3% | 100.0% |
| 3855974 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.71 | 61.0 | 5.81e-01 | 100.0% | 81.3% |
| 4593997 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 53.0 | 5.28e-01 | 92.2% | 80.0% |
| 3875355 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.69 | 62.0 | 4.42e-01 | 100.0% | 40.0% |
| 3794500 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.69 | 59.0 | 4.20e-01 | 100.0% | 32.4% |
| 3533686 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.69 | 62.0 | 3.80e-01 | 100.0% | 19.5% |
| 3385654 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 60.0 | 4.90e-01 | 98.4% | 95.8% |
| 4026274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 61.0 | 4.74e-01 | 100.0% | 45.7% |
| 5031165 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.68 | 55.0 | 5.37e-01 | 96.9% | 81.4% |
| 5075469 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 52.0 | 5.27e-01 | 95.3% | 83.1% |
| 3246086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 5.07e-01 | 100.0% | 63.2% |
| 4215717 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 54.0 | 5.35e-01 | 96.9% | 82.6% |
| 3616769 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.68 | 59.0 | 5.11e-01 | 100.0% | 63.2% |
| 3791752 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 57.0 | 5.75e-01 | 100.0% | 93.8% |
| 4000622 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.68 | 59.0 | 4.76e-01 | 100.0% | 50.8% |
| 3867384 | 4.1.1.50 ↗ | beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 | 0.67 | 59.0 | 5.52e-01 | 98.4% | 87.5% |
| 4971532 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 52.0 | 5.09e-01 | 96.9% | 78.6% |
| 3623785 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 57.0 | 5.40e-01 | 93.8% | 82.7% |
| 3404983 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.67 | 60.0 | 4.96e-01 | 100.0% | 57.3% |
| 3503884 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.66 | 56.0 | 4.31e-01 | 100.0% | 42.1% |
| 3581817 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.66 | 57.0 | 5.67e-01 | 100.0% | 92.3% |
| 3384153 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.66 | 45.0 | 2.99e-01 | 70.3% | 32.9% |
| 3576940 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 60.0 | 4.05e-01 | 100.0% | 31.1% |
| 3621734 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.65 | 49.0 | 4.04e-01 | 82.8% | 79.2% |
| 3969959 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 55.0 | 4.93e-01 | 95.3% | 78.9% |
| 3787441 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 52.0 | 4.71e-01 | 92.2% | 71.1% |
| 4159881 | 220.1.1.197 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 | 0.64 | 54.0 | 4.79e-01 | 95.3% | 84.2% |
| 4426470 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 43.0 | 4.20e-01 | 78.1% | 62.9% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.64 | 51.0 | 5.11e-01 | 92.2% | 86.2% |
| 4945344 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 54.0 | 3.44e-01 | 95.3% | 52.9% |
| 4023069 | 219.1.1.93 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 | 0.64 | 54.0 | 4.26e-01 | 95.3% | 48.5% |
| 3476336 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.63 | 57.0 | 5.58e-01 | 100.0% | 95.7% |
| 3970513 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.60 | 54.0 | 4.93e-01 | 100.0% | 78.8% |
| 3411042 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 46.0 | 4.72e-01 | 84.4% | 98.3% |
| 3540588 | 10.13.1.0 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A | 0.58 | 45.0 | 3.33e-01 | 90.6% | 91.8% |
| 4957983 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.57 | 46.0 | 3.85e-01 | 89.1% | 87.3% |
| 5039871 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 44.0 | 2.99e-01 | 87.5% | 100.0% |
| 4031151 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.54 | 41.0 | 3.97e-01 | 87.5% | 96.0% |
| 3490456 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 43.0 | 3.42e-01 | 93.8% | 44.1% |
| 3637319 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 40.0 | 2.70e-01 | 84.4% | 95.6% |
| 1146580 | 3308.1.1.2 ↗ | beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme › CarG-like | 0.52 | 42.0 | 3.28e-01 | 95.3% | 71.5% |
| 3933166 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.52 | 45.0 | 3.51e-01 | 100.0% | 70.3% |
| 3506871 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.51 | 41.0 | 2.50e-01 | 92.2% | 18.7% |
| 4969547 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 43.0 | 3.35e-01 | 100.0% | 85.6% |
| 2834340 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 37.0 | 3.05e-01 | 84.4% | 89.2% |
| 3208578 | 76.1.1.7 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › DUF7600 | 0.50 | 34.0 | 2.86e-01 | 73.4% | 94.4% |