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OR515479.1__WNL63470.1__X__00194
Bact-VirOR515479.1__WNL63470.1__X__00194
Identity
- Accession:
- OR515479 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 117-194
Domain cluster:
rep: PHAGE-A9--js4906-26-5_S28_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00015__D30-95
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wqwA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 46.0 | 3.46e-01 | 78.2% | 93.6% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 41.0 | 2.93e-01 | 76.9% | 58.0% |
| 3kd6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 39.0 | 2.70e-01 | 76.9% | 37.7% |
| 4gnrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 34.0 | 2.90e-01 | 70.5% | 89.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5064558 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.61 | 41.0 | 2.72e-01 | 70.5% | 40.0% |
| 5050241 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 37.0 | 2.59e-01 | 70.5% | 49.3% |
| 3338030 | 4.1.1.282 ↗ | beta barrels › SH3 › SH3 › SH3 › GUB_WAK_bind | 0.54 | 37.0 | 3.38e-01 | 71.8% | 86.5% |
| 4382986 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.53 | 37.0 | 2.69e-01 | 71.8% | 90.9% |
D2
high
residues 454-499
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02839.20 best | CBM_5_12 | 27.6 | 3.30e-06 | 84.8% | 86.4% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.96 | 87.0 | 8.57e-01 | 97.8% | 91.7% |
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.94 | 83.0 | 6.30e-01 | 93.5% | 49.5% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.88 | 80.0 | 7.68e-01 | 97.8% | 88.2% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.85 | 77.0 | 6.51e-01 | 100.0% | 83.6% |
| 1aiwA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.83 | 73.0 | 6.52e-01 | 95.7% | 85.5% |
| 1ed7A00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.80 | 65.0 | 6.59e-01 | 91.3% | 100.0% |
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.76 | 67.0 | 6.12e-01 | 100.0% | 98.4% |
| 4oj5A02 | 2.10.10.80 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.71 | 60.0 | 5.30e-01 | 100.0% | 81.7% |
| 4maaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 57.0 | 3.86e-01 | 100.0% | 30.0% |
| 4n0qA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 54.0 | 3.79e-01 | 97.8% | 30.1% |
| 3td9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 55.0 | 3.79e-01 | 100.0% | 29.1% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.62 | 53.0 | 3.43e-01 | 97.8% | 60.6% |
| 1cb8A02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 51.0 | 3.29e-01 | 100.0% | 35.0% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.58 | 49.0 | 3.60e-01 | 100.0% | 42.4% |
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.58 | 44.0 | 3.67e-01 | 91.3% | 46.0% |
| 4lqeA00 | 3.40.1350.140 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like | 0.57 | 44.0 | 3.35e-01 | 100.0% | 69.1% |
| 3q0iA02 | 3.10.25.10 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain | 0.57 | 49.0 | 3.82e-01 | 100.0% | 75.2% |
| 1dz1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 35.0 | 3.07e-01 | 71.7% | 41.4% |
| 5tw4A02 | 2.30.140.20 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Penicillin-binding protein 4, C-terminal domain | 0.53 | 39.0 | 3.57e-01 | 82.6% | 95.7% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 40.0 | 2.68e-01 | 84.8% | 51.1% |
| 2p4pA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 45.0 | 3.80e-01 | 100.0% | 96.4% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.52 | 41.0 | 3.83e-01 | 100.0% | 98.5% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4307941 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.96 | 84.0 | 7.59e-01 | 93.5% | 96.6% |
| 4009008 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.94 | 81.0 | 7.54e-01 | 91.3% | 94.5% |
| 1322863 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.94 | 81.0 | 8.15e-01 | 91.3% | 100.0% |
| 1322862 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.93 | 81.0 | 8.03e-01 | 93.5% | 97.9% |
| 4110715 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.92 | 82.0 | 7.46e-01 | 95.7% | 81.4% |
| 4444075 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.92 | 81.0 | 8.35e-01 | 93.5% | 100.0% |
| 3976685 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.92 | 84.0 | 7.90e-01 | 97.8% | 96.3% |
| 5026481 | 64.3.1.3 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 | 0.92 | 81.0 | 7.91e-01 | 97.8% | 88.0% |
| 3971347 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.91 | 84.0 | 7.72e-01 | 100.0% | 86.2% |
| 1694867 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.90 | 82.0 | 7.79e-01 | 97.8% | 96.2% |
| 3972100 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.90 | 81.0 | 7.12e-01 | 97.8% | 70.8% |
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.90 | 81.0 | 7.89e-01 | 97.8% | 96.0% |
| 4026053 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.89 | 68.0 | 7.31e-01 | 80.4% | 92.5% |
| 2389402 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.88 | 79.0 | 7.47e-01 | 97.8% | 83.3% |
| 1291025 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.85 | 77.0 | 6.51e-01 | 100.0% | 83.6% |
| 4233290 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.84 | 75.0 | 7.30e-01 | 100.0% | 98.0% |
| 3412645 | 64.3.1.4 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › Tmp39 | 0.84 | 66.0 | 5.67e-01 | 84.8% | 58.6% |
| 4149799 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.82 | 68.0 | 6.66e-01 | 91.3% | 98.0% |
| 4009012 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.80 | 71.0 | 6.36e-01 | 100.0% | 81.2% |
| 3516371 | 64.3.1.4 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › Tmp39 | 0.80 | 65.0 | 4.76e-01 | 89.1% | 39.1% |
| 2966957 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.79 | 68.0 | 5.40e-01 | 97.8% | 64.1% |
| 4887092 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.78 | 68.0 | 5.61e-01 | 100.0% | 63.1% |
| 1002430 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.76 | 67.0 | 6.12e-01 | 100.0% | 98.4% |
| 3981632 | 70.4.1.9 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement_2 | 0.76 | 57.0 | 6.07e-01 | 87.0% | 92.5% |
| 3222227 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.71 | 50.0 | 3.00e-01 | 80.4% | 10.8% |
| 2736862 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.70 | 57.0 | 5.19e-01 | 100.0% | 80.9% |
| 2736861 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.69 | 56.0 | 5.09e-01 | 95.7% | 73.1% |
| 3934136 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.68 | 59.0 | 3.97e-01 | 100.0% | 29.8% |
| 4169889 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.67 | 53.0 | 4.60e-01 | 87.0% | 70.0% |
| 5039450 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.65 | 50.0 | 4.37e-01 | 89.1% | 60.0% |
| 5042815 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.64 | 50.0 | 4.20e-01 | 87.0% | 66.3% |
| 3942241 | 325.1.7.22 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › BSH_CusB | 0.64 | 47.0 | 4.18e-01 | 82.6% | 71.4% |
| 3184772 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.63 | 50.0 | 4.11e-01 | 89.1% | 54.1% |
| 5009746 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.63 | 50.0 | 4.36e-01 | 91.3% | 61.3% |
| 3999975 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.63 | 49.0 | 4.29e-01 | 89.1% | 60.0% |
| 5022946 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.63 | 49.0 | 4.22e-01 | 91.3% | 57.5% |
| 3955634 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.62 | 53.0 | 4.48e-01 | 100.0% | 73.8% |
| 5041150 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.62 | 49.0 | 4.29e-01 | 84.8% | 70.0% |
| 4962194 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.61 | 48.0 | 4.31e-01 | 91.3% | 65.7% |
| 4962206 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.61 | 45.0 | 4.07e-01 | 84.8% | 62.9% |
| 3619978 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 46.0 | 2.73e-01 | 87.0% | 11.0% |
| 3435159 | 304.4.1.55 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GUB_WAK_bind | 0.60 | 47.0 | 3.31e-01 | 100.0% | 25.8% |
| 3558025 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 48.0 | 2.85e-01 | 91.3% | 12.1% |
| 4168203 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.60 | 47.0 | 4.04e-01 | 91.3% | 57.5% |
| 3639839 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.59 | 39.0 | 3.74e-01 | 71.7% | 58.5% |
| 3958120 | 75.1.1.0 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like | 0.59 | 48.0 | 3.59e-01 | 93.5% | 88.3% |
| 3573532 | 2007.15.1.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › MAP3K_TRAF_bd | 0.57 | 49.0 | 3.58e-01 | 100.0% | 48.9% |
| 4084349 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.57 | 48.0 | 3.74e-01 | 100.0% | 77.3% |
| None | — | 0.56 | 38.0 | 2.16e-01 | 100.0% | 5.6% | |
| 4187601 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.55 | 46.0 | 3.61e-01 | 100.0% | 75.2% |
| 4014568 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.54 | 37.0 | 3.54e-01 | 71.7% | 63.6% |
| 4199720 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.54 | 45.0 | 3.59e-01 | 100.0% | 74.3% |
| 3801967 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.52 | 39.0 | 2.55e-01 | 95.7% | 35.9% |
| 3607877 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.52 | 38.0 | 2.68e-01 | 100.0% | 21.6% |
D3
high
residues 512-603
Domain cluster:
rep: ON470610.1__URE76665.1__X__00024__D292-385
D4
medium
residues 339-437
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.64 | 33.0 | 4.39e-01 | 91.9% | 98.0% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.56 | 28.0 | 3.05e-01 | 88.9% | 53.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4489808 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.57 | 29.0 | 3.12e-01 | 87.9% | 55.3% |
| 3623943 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.51 | 33.0 | 3.72e-01 | 82.8% | 89.3% |
| 3500755 | 304.55.1.14 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp | 0.50 | 45.0 | 3.56e-01 | 100.0% | 81.4% |
D5
medium
residues 607-731
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q63F00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 38.0 | 3.69e-01 | 72.0% | 63.3% |
| 1oqwA00 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.54 | 37.0 | 3.59e-01 | 70.4% | 68.8% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 40.0 | 2.94e-01 | 79.2% | 70.7% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 44.0 | 3.25e-01 | 90.4% | 50.1% |
| 2flhB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 37.0 | 3.45e-01 | 72.0% | 70.6% |
| 3h2gA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 39.0 | 3.04e-01 | 77.6% | 97.8% |
| 1mg2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 35.0 | 2.51e-01 | 70.4% | 58.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973700 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.82 | 54.0 | 6.21e-01 | 75.2% | 88.4% |
| 2491359 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.67 | 60.0 | 5.86e-01 | 99.2% | 87.5% |
| 3291271 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.56 | 39.0 | 3.73e-01 | 72.0% | 61.4% |
| 3610630 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.54 | 42.0 | 3.38e-01 | 81.6% | 95.7% |
| 3233362 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.54 | 39.0 | 3.80e-01 | 73.6% | 80.7% |
| 4088781 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.53 | 38.0 | 3.42e-01 | 73.6% | 70.0% |
| 3916099 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.53 | 35.0 | 3.07e-01 | 72.0% | 45.6% |
| 3675483 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.96e-01 | 87.2% | 48.0% |
| 4991691 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 42.0 | 3.54e-01 | 92.0% | 98.3% |
| 4026342 | 247.1.1.31 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_4, Anti-Pycsar_Apyc1 | 0.51 | 38.0 | 2.44e-01 | 80.0% | 28.7% |
| 3849724 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.51 | 43.0 | 2.96e-01 | 95.2% | 63.3% |
D6
medium
residues 737-836