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OR521058.1__WNO25873.1__SEA_ALTADENA_51__00051

Bact-Vir

OR521058.1__WNO25873.1__SEA_ALTADENA_51__00051

Identity

Accession:
OR521058 ↗
Kingdom:
phage

Quality

70.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-75
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 51.0 4.84e-01 90.5% 66.7%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.65 41.0 3.88e-01 95.9% 52.2%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.63 43.0 4.48e-01 73.0% 81.4%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 56.0 4.62e-01 100.0% 94.8%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 55.0 4.54e-01 98.6% 97.1%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 55.0 4.55e-01 100.0% 94.8%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 55.0 4.64e-01 100.0% 97.6%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 55.0 4.45e-01 100.0% 91.5%
1gm5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 36.0 3.23e-01 90.5% 41.2%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 53.0 4.49e-01 98.6% 97.6%
3f3fD01 2.20.25.500 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.60 39.0 4.37e-01 95.9% 94.1%
3v8oA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 4.37e-01 86.5% 89.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 44.0 3.05e-01 78.4% 38.4%
7oodf01 3.10.430.100 Alpha Beta › Roll › Ribosomal Protein L9; domain 2 › Ribosomal protein L9, C-terminal domain 0.59 47.0 4.75e-01 90.5% 98.7%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 50.0 4.24e-01 98.6% 96.2%
5jh8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 42.0 4.35e-01 93.2% 83.6%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.58 40.0 3.66e-01 73.0% 84.6%
2qg7B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 43.0 3.95e-01 81.1% 78.2%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 29.0 3.46e-01 82.4% 71.1%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.58 48.0 4.56e-01 94.6% 98.9%
4ms4B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 38.0 2.96e-01 70.3% 85.6%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 47.0 3.85e-01 100.0% 79.0%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 48.0 4.53e-01 100.0% 77.2%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 47.0 3.31e-01 95.9% 81.9%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.55 48.0 4.18e-01 100.0% 77.8%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 49.0 4.16e-01 100.0% 65.3%
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.54 45.0 4.03e-01 90.5% 82.5%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 36.0 3.62e-01 83.8% 66.7%
4ghnA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 37.0 3.37e-01 73.0% 94.3%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 39.0 4.23e-01 87.8% 100.0%
1te0A03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 37.0 3.44e-01 73.0% 96.0%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 47.0 4.01e-01 100.0% 65.3%
4ritA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.53 38.0 2.80e-01 78.4% 32.4%
2basA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 41.0 3.58e-01 85.1% 71.6%
2lkoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 46.0 3.79e-01 100.0% 60.9%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 46.0 3.84e-01 98.6% 72.7%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 45.0 2.91e-01 98.6% 97.8%
2cayB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.76e-01 100.0% 63.4%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 37.0 3.53e-01 97.3% 62.6%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 4.06e-01 87.8% 88.0%
4kcaA03 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 3.99e-01 94.6% 96.9%
5mrwB01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.51 42.0 3.61e-01 97.3% 100.0%
3ossC00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 4.15e-01 91.9% 100.0%
4jhyA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.51 41.0 3.33e-01 91.9% 48.1%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 3.86e-01 100.0% 66.1%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 43.0 3.89e-01 100.0% 96.2%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.50 44.0 3.68e-01 100.0% 71.3%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4028916 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.73 53.0 4.64e-01 77.0% 75.5%
4990916 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.70 56.0 5.11e-01 87.8% 83.0%
5052436 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.69 50.0 4.92e-01 90.5% 71.2%
3701084 316.1.1.14 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD 0.69 55.0 4.11e-01 87.8% 51.9%
3952804 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.66 46.0 5.13e-01 91.9% 100.0%
3946569 244.2.1.7 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.65 40.0 3.94e-01 93.2% 56.2%
3510389 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 41.0 3.86e-01 82.4% 53.9%
4662938 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.65 41.0 4.40e-01 100.0% 72.3%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.63 46.0 3.83e-01 78.4% 76.2%
3941288 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 55.0 4.39e-01 100.0% 95.9%
4937869 3414.1.1.0 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.61 53.0 5.08e-01 97.3% 89.4%
4097208 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.61 40.0 4.14e-01 100.0% 72.9%
5069282 244.2.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.60 40.0 3.63e-01 95.9% 50.0%
5015727 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.60 41.0 3.77e-01 71.6% 94.0%
1779210 2.1.1.112 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNApolII_N 0.60 33.0 4.06e-01 90.5% 95.2%
3931011 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 53.0 4.38e-01 100.0% 92.3%
4062527 244.2.1.7 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.58 38.0 3.65e-01 95.9% 57.6%
3627817 220.1.1.47 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.58 53.0 3.46e-01 100.0% 28.8%
5052568 244.2.1.7 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.58 38.0 3.79e-01 94.6% 63.7%
4981790 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.57 44.0 3.77e-01 86.5% 55.4%
3925891 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 4.59e-01 100.0% 77.8%
5042834 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.57 46.0 3.64e-01 87.8% 44.0%
3996686 220.1.1.47 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.57 51.0 4.06e-01 100.0% 58.7%
3692189 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 39.0 3.30e-01 73.0% 94.8%
3589974 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 49.0 3.90e-01 97.3% 70.3%
3519032 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 46.0 4.18e-01 95.9% 67.0%
3925367 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 50.0 3.95e-01 100.0% 56.7%
943 220.1.1.47 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.55 49.0 4.44e-01 100.0% 79.0%
3584249 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.54 47.0 4.17e-01 98.6% 68.2%
5077064 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.54 42.0 2.85e-01 100.0% 21.0%
3978651 241.13.1.1 a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif 0.53 44.0 3.99e-01 94.6% 99.0%
3742185 2003.1.5.26 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 0.53 38.0 2.47e-01 77.0% 72.2%
3411359 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 48.0 4.00e-01 100.0% 67.2%
3796100 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 47.0 3.74e-01 100.0% 55.3%
3251228 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 46.0 3.74e-01 98.6% 55.2%
3928695 220.1.1.49 beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.53 47.0 3.72e-01 100.0% 49.0%
3885625 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.53 47.0 3.72e-01 100.0% 62.6%
3734667 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 46.0 3.53e-01 100.0% 50.0%
3496765 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 46.0 2.80e-01 100.0% 90.8%
3957516 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.52 42.0 3.97e-01 87.8% 86.7%
3653181 223.2.1.9 a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.52 41.0 3.37e-01 87.8% 50.3%
4641708 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.52 42.0 3.39e-01 93.2% 78.8%
5049973 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 41.0 3.38e-01 87.8% 84.3%
4115593 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.52 43.0 2.89e-01 100.0% 21.8%
4533094 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 45.0 3.80e-01 100.0% 63.8%
3479701 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 45.0 3.94e-01 100.0% 70.4%
4034138 7520.1.1.0 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.51 41.0 3.35e-01 85.1% 75.9%
3178444 220.1.1.112 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 0.51 45.0 3.70e-01 100.0% 60.0%
3788003 220.1.1.112 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 0.51 45.0 3.60e-01 98.6% 62.1%
1720285 223.1.1.12 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_2 0.51 39.0 3.51e-01 85.1% 69.7%
4203238 220.1.1.217 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.50 45.0 3.10e-01 100.0% 32.0%
3627778 220.1.1.64 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.50 43.0 4.00e-01 100.0% 75.0%
3974425 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.50 42.0 3.98e-01 100.0% 93.7%
4069753 295.1.1.2 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.50 42.0 3.52e-01 95.9% 71.9%