Back to structures

OR521059.1__WNO25998.1__SEA_ASEGATO_106__00103

Bact-Vir

OR521059.1__WNO25998.1__SEA_ASEGATO_106__00103

Identity

Accession:
OR521059 ↗
Kingdom:
phage

Quality

63.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-68
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.76 65.0 5.01e-01 93.9% 72.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 54.0 5.51e-01 75.8% 76.9%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.75 54.0 5.50e-01 75.8% 93.7%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.73 54.0 5.65e-01 90.9% 86.7%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 50.0 5.26e-01 72.7% 94.9%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.71 49.0 5.42e-01 74.2% 88.9%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.73e-01 89.4% 96.8%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 5.17e-01 87.9% 77.5%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 43.0 4.44e-01 90.9% 68.9%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 51.0 4.97e-01 83.3% 82.7%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.41e-01 86.4% 90.3%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.39e-01 87.9% 96.8%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 4.66e-01 86.4% 73.9%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.64 44.0 4.64e-01 72.7% 91.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.25e-01 93.9% 91.7%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 5.07e-01 87.9% 92.4%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.63 53.0 4.51e-01 93.9% 85.2%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 5.37e-01 92.4% 98.3%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.63 52.0 4.89e-01 89.4% 91.1%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 5.16e-01 89.4% 98.4%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.62 47.0 5.09e-01 81.8% 100.0%
2ktyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 48.0 3.91e-01 86.4% 81.3%
2pm9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 51.0 3.25e-01 90.9% 39.8%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 43.0 4.21e-01 71.2% 81.4%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 44.0 4.25e-01 77.3% 78.7%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 46.0 4.14e-01 83.3% 84.6%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.59 38.0 4.09e-01 97.0% 79.6%
2rsvA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.59 51.0 3.17e-01 100.0% 85.1%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 41.0 4.20e-01 75.8% 89.4%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 44.0 3.55e-01 87.9% 50.3%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.58 47.0 4.46e-01 95.5% 85.5%
7vpjA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.57 44.0 3.27e-01 84.8% 63.1%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 49.0 4.03e-01 95.5% 94.2%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 48.0 4.14e-01 97.0% 87.3%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.57 41.0 4.02e-01 75.8% 70.4%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 44.0 2.79e-01 89.4% 31.6%
4ec7A00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.57 45.0 3.81e-01 86.4% 81.5%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 47.0 4.07e-01 100.0% 88.1%
3jr1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 44.0 3.94e-01 90.9% 92.9%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 47.0 3.11e-01 97.0% 36.6%
2jaeA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 48.0 3.45e-01 97.0% 75.7%
1jsgA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.54 37.0 3.18e-01 72.7% 91.0%
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.53 42.0 3.71e-01 89.4% 56.3%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 47.0 3.48e-01 97.0% 80.5%
4l5rC02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 36.0 3.35e-01 72.7% 97.8%
3lbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 38.0 2.72e-01 78.8% 86.0%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 41.0 2.87e-01 92.4% 51.9%
2gk4A00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.51 41.0 2.94e-01 93.9% 86.5%
2dx0B01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 36.0 3.54e-01 77.3% 72.0%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4644007 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.82 61.0 6.43e-01 77.3% 88.1%
4941620 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 61.0 6.36e-01 77.3% 86.7%
3798523 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 58.0 5.44e-01 75.8% 96.2%
4138563 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 59.0 5.99e-01 77.3% 80.0%
4484893 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 59.0 6.02e-01 89.4% 81.5%
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 57.0 5.66e-01 93.9% 74.3%
5069121 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.76 55.0 5.77e-01 77.3% 91.7%
3683487 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.75 64.0 4.69e-01 93.9% 50.9%
3570369 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 60.0 5.39e-01 86.4% 65.6%
5032461 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 60.0 6.10e-01 92.4% 95.4%
3281271 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.71 59.0 5.33e-01 90.9% 71.1%
4033484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.77e-01 87.9% 93.8%
5051313 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.91e-01 92.4% 90.8%
4049824 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 56.0 4.65e-01 86.4% 52.2%
4028885 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.70 57.0 5.75e-01 87.9% 95.4%
4034317 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 57.0 5.82e-01 92.4% 93.7%
4010681 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.70 57.0 5.07e-01 90.9% 62.1%
4104219 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.70 56.0 5.73e-01 89.4% 95.4%
3480204 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 51.0 5.13e-01 75.8% 93.8%
4118552 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 56.0 5.43e-01 89.4% 86.7%
5017073 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.70 55.0 4.27e-01 87.9% 42.7%
4101580 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 57.0 5.73e-01 89.4% 93.8%
5056067 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.69 42.0 2.71e-01 84.8% 13.8%
3954938 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 57.0 5.76e-01 89.4% 95.4%
3289944 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.69 58.0 5.21e-01 92.4% 70.0%
5011394 4.1.3.0 beta barrels › SH3 › SH3 › Calcium-binding protein CcbP 0.69 53.0 5.39e-01 89.4% 84.6%
3490245 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.21e-01 93.9% 88.9%
4041586 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.68 55.0 5.55e-01 89.4% 93.8%
3608236 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.68 54.0 5.47e-01 87.9% 96.9%
4446791 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 54.0 5.50e-01 89.4% 93.8%
3599172 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 54.0 5.52e-01 89.4% 93.8%
4037383 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 53.0 5.42e-01 87.9% 95.4%
3387119 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.67 57.0 5.14e-01 93.9% 68.9%
3306779 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 53.0 5.40e-01 87.9% 95.4%
4051625 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 54.0 5.49e-01 89.4% 93.8%
3265170 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 53.0 5.35e-01 87.9% 95.4%
4038269 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 53.0 5.33e-01 87.9% 95.4%
4146937 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 54.0 5.44e-01 89.4% 93.8%
3568329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.64e-01 92.4% 96.7%
3950208 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 53.0 5.39e-01 89.4% 93.8%
4135259 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 53.0 5.36e-01 89.4% 95.4%
3449268 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.76e-01 86.4% 65.9%
3769507 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.65 51.0 5.00e-01 93.9% 80.0%
4158157 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 51.0 5.20e-01 87.9% 95.4%
3790784 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.64 48.0 3.21e-01 98.5% 20.0%
3392130 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.64 56.0 5.65e-01 95.5% 96.9%
142633 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 50.0 5.07e-01 87.9% 92.4%
4959077 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 45.0 4.58e-01 74.2% 95.3%
4201878 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 51.0 5.17e-01 89.4% 93.8%
3774692 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.64 51.0 4.81e-01 87.9% 85.0%
3944244 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.63 44.0 3.45e-01 74.2% 35.6%
3585214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 42.0 3.70e-01 72.7% 46.0%
578 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.62 50.0 4.03e-01 87.9% 58.6%
2138090 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 49.0 4.98e-01 89.4% 93.8%
5061113 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.62 47.0 5.03e-01 95.5% 100.0%
4863266 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.62 48.0 4.92e-01 89.4% 89.2%
3444064 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.62 49.0 3.65e-01 93.9% 42.1%
3519115 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 52.0 3.35e-01 97.0% 27.7%
4956443 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.73e-01 92.4% 91.7%
3758536 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.63e-01 95.5% 81.4%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 48.0 4.92e-01 89.4% 90.8%
4003553 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.60 50.0 3.06e-01 93.9% 20.9%
5053906 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.60 44.0 4.59e-01 93.9% 90.0%
2557227 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.60 50.0 4.81e-01 95.5% 96.1%
3500542 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 46.0 4.26e-01 87.9% 66.7%
3223474 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.59 50.0 3.16e-01 95.5% 24.8%
3540253 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.58 44.0 4.06e-01 89.4% 75.8%
4093836 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 44.0 4.54e-01 93.9% 95.0%
3903552 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.57 46.0 2.90e-01 89.4% 24.7%
3599298 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 45.0 2.98e-01 90.9% 29.5%
3609692 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 46.0 2.79e-01 90.9% 17.7%
3242234 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 47.0 2.81e-01 95.5% 17.3%
3583473 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 44.0 2.85e-01 86.4% 28.6%
5032977 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 42.0 4.05e-01 86.4% 73.8%
3570230 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 44.0 4.01e-01 89.4% 71.1%
4250402 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 34.0 3.81e-01 95.5% 93.3%
3187166 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.54 47.0 4.34e-01 98.5% 83.5%
3958145 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 44.0 4.48e-01 97.0% 95.4%
4134860 1.1.7.19 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.52 43.0 3.44e-01 93.9% 84.3%
4949158 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.51 44.0 3.00e-01 93.9% 38.8%
3964837 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.51 39.0 3.79e-01 93.9% 76.0%