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OR521068.1__WNO26731.1__SEA_GROUNDHOG_44__00043

Bact-Vir

OR521068.1__WNO26731.1__SEA_GROUNDHOG_44__00043

Identity

Accession:
OR521068 ↗
Kingdom:
phage

Quality

75.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-56
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.84 66.0 5.34e-01 100.0% 46.1%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 66.0 6.65e-01 100.0% 94.5%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 68.0 5.90e-01 100.0% 64.0%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 5.60e-01 100.0% 67.5%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.71 57.0 4.30e-01 90.9% 80.1%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.70 61.0 5.15e-01 100.0% 69.9%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.81e-01 100.0% 89.4%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.69 56.0 5.50e-01 98.2% 85.0%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 59.0 5.75e-01 96.4% 98.3%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.54e-01 100.0% 82.2%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 59.0 4.85e-01 100.0% 60.0%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 60.0 5.41e-01 100.0% 81.3%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 59.0 5.32e-01 100.0% 92.1%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.67 51.0 3.32e-01 85.5% 40.6%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.71e-01 96.4% 91.5%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.62 47.0 3.86e-01 85.5% 75.9%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 54.0 4.34e-01 100.0% 64.5%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.62 50.0 3.64e-01 94.5% 43.4%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.61 53.0 4.11e-01 100.0% 66.9%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.60 48.0 4.38e-01 100.0% 66.2%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 46.0 3.90e-01 85.5% 82.1%
3kenA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.60 48.0 2.94e-01 87.3% 91.6%
3ec1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 41.0 3.00e-01 74.5% 31.4%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 47.0 3.90e-01 87.3% 81.0%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.59 47.0 4.30e-01 90.9% 86.7%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.59 46.0 3.26e-01 100.0% 28.1%
2aq6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 45.0 3.45e-01 89.1% 86.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 47.0 4.60e-01 98.2% 98.4%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.57 44.0 3.69e-01 89.1% 76.9%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.46e-01 100.0% 89.3%
3ostA00 3.30.310.220 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Fungal kinase associated-1 domain 0.57 42.0 3.37e-01 81.8% 74.8%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 46.0 4.57e-01 98.2% 93.0%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 44.0 3.10e-01 90.9% 67.6%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.31e-01 89.1% 76.9%
2jvnA00 3.90.640.80 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.56 39.0 3.14e-01 94.5% 32.5%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 43.0 3.14e-01 90.9% 73.2%
2wv9A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 43.0 3.04e-01 100.0% 27.3%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 3.95e-01 100.0% 60.5%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.95e-01 100.0% 81.6%
4m9fA00 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 43.0 2.91e-01 100.0% 23.5%
4k2xB02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 47.0 4.21e-01 100.0% 98.8%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 43.0 3.09e-01 90.9% 86.7%
1v5uA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.71e-01 100.0% 69.2%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.54 44.0 3.69e-01 100.0% 50.5%
3cp7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 44.0 3.50e-01 100.0% 45.0%
3qokA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 38.0 3.27e-01 78.2% 100.0%
1o97C00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 45.0 3.04e-01 100.0% 57.4%
2ojhA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 45.0 2.96e-01 100.0% 82.3%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 42.0 3.04e-01 85.5% 71.9%
1lmlA04 2.30.34.10 Mainly Beta › Roll › Leishmanolysin; domain 4 › Leishmanolysin domain 4 0.53 41.0 3.57e-01 92.7% 76.8%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 3.94e-01 100.0% 72.6%
3ec6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.29e-01 90.9% 83.6%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.52 40.0 4.00e-01 98.2% 89.7%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 44.0 3.71e-01 100.0% 74.0%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.51 40.0 3.35e-01 89.1% 47.5%
2pliA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.51 35.0 3.13e-01 74.5% 90.5%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 39.0 3.60e-01 87.3% 90.5%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
25624 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.82 69.0 7.06e-01 98.2% 98.1%
3173156 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.82 72.0 6.39e-01 100.0% 70.0%
3977126 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.80 70.0 7.02e-01 100.0% 96.4%
4163661 4.1.1.446 beta barrels › SH3 › SH3 › SH3 › PF30222 0.79 69.0 6.48e-01 100.0% 85.3%
3704305 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.78 68.0 6.35e-01 100.0% 78.6%
3971321 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.77 66.0 6.21e-01 100.0% 78.3%
5034351 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 66.0 6.60e-01 96.4% 92.7%
157624 4.1.1.47 beta barrels › SH3 › SH3 › SH3 › Gemin6 0.77 68.0 5.90e-01 100.0% 64.0%
3598125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 65.0 5.95e-01 100.0% 72.0%
4026408 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.75 66.0 5.45e-01 100.0% 55.0%
3625817 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.75 66.0 5.83e-01 100.0% 70.0%
4323235 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 65.0 5.23e-01 100.0% 71.8%
5031673 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.29e-01 100.0% 69.5%
4221708 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.73 65.0 6.02e-01 100.0% 78.6%
3591183 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 64.0 5.21e-01 100.0% 86.7%
3507639 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.72 62.0 5.79e-01 100.0% 78.6%
4293453 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 62.0 5.55e-01 100.0% 68.8%
3973076 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.71 59.0 3.94e-01 96.4% 22.6%
3936053 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.71 61.0 5.69e-01 98.2% 78.6%
4044269 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.71 58.0 5.38e-01 100.0% 72.9%
197051 4.1.1.74 beta barrels › SH3 › SH3 › SH3 › DUF3247 0.70 61.0 5.15e-01 100.0% 69.9%
184917 4.1.1.81 beta barrels › SH3 › SH3 › SH3 › LSM14 0.70 61.0 5.03e-01 100.0% 58.4%
4377781 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 59.0 5.28e-01 100.0% 80.0%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 59.0 5.27e-01 100.0% 71.2%
5058457 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 54.0 5.18e-01 96.4% 75.4%
4109046 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 58.0 5.12e-01 100.0% 83.5%
3629315 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 55.0 3.90e-01 94.5% 70.3%
4930398 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.24e-01 98.2% 100.0%
5022543 2002.1.1.36 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.66 47.0 2.69e-01 74.5% 14.7%
3643001 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 50.0 3.98e-01 87.3% 76.7%
4502878 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.65 50.0 4.93e-01 85.5% 81.7%
3635664 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 51.0 4.09e-01 92.7% 80.8%
3538619 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 50.0 3.93e-01 92.7% 77.7%
3596826 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 53.0 4.43e-01 100.0% 83.0%
4962621 1.1.5.31 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.61 49.0 3.72e-01 90.9% 85.7%
4963864 1.1.5.31 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.61 50.0 3.81e-01 92.7% 85.9%
3607454 220.1.1.306 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_22 0.61 53.0 4.39e-01 100.0% 79.0%
4025829 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.79e-01 100.0% 90.9%
3782999 219.1.1.115 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.60 49.0 3.78e-01 100.0% 93.8%
3176049 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.59 48.0 4.59e-01 100.0% 76.8%
3991896 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 48.0 4.22e-01 100.0% 69.5%
3587958 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 49.0 4.33e-01 100.0% 81.1%
3721465 708.1.2.6 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.59 48.0 3.66e-01 98.2% 66.0%
3703970 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 48.0 4.08e-01 100.0% 67.6%
4218488 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 47.0 4.30e-01 98.2% 78.8%
3566631 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 47.0 4.29e-01 98.2% 78.8%
3482680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.59e-01 98.2% 98.5%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 46.0 4.36e-01 94.5% 90.0%
3395150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.61e-01 96.4% 88.3%
4937534 2005.1.1.17 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.57 45.0 2.91e-01 92.7% 47.6%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.48e-01 100.0% 89.7%
4944685 1.1.5.18 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 0.57 46.0 3.40e-01 90.9% 86.0%
4331393 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 45.0 3.43e-01 90.9% 80.7%
3592540 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.43e-01 100.0% 86.7%
3926207 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.48e-01 94.5% 94.3%
4997723 1.1.5.31 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.56 45.0 3.33e-01 90.9% 83.2%
4129418 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 45.0 3.45e-01 90.9% 79.3%
3623785 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 45.0 4.18e-01 98.2% 81.3%
3717734 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 48.0 3.74e-01 100.0% 74.4%
3503332 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.14e-01 90.9% 100.0%
3479042 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 44.0 4.16e-01 94.5% 85.7%
3985863 219.1.1.109 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Toxin_15 0.55 47.0 3.23e-01 100.0% 72.7%
3983708 219.1.1.109 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Toxin_15 0.55 46.0 3.23e-01 100.0% 76.4%
3230520 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 43.0 3.74e-01 100.0% 55.6%
3280223 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.54 45.0 3.20e-01 100.0% 55.9%
3592358 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 46.0 3.71e-01 100.0% 78.3%
3615659 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.54 49.0 3.32e-01 100.0% 83.7%
3607724 220.1.1.92 beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.54 47.0 3.60e-01 100.0% 67.7%
3547089 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 46.0 3.98e-01 100.0% 61.1%
3948209 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.18e-01 100.0% 78.7%
170199 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 41.0 2.92e-01 92.7% 88.9%
3932484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 42.0 4.13e-01 94.5% 90.6%
3596066 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.56e-01 100.0% 65.6%
4015835 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.53 43.0 3.36e-01 100.0% 92.4%
5051898 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.53 42.0 3.16e-01 90.9% 73.0%
4067273 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.53 44.0 3.25e-01 100.0% 92.1%
4028731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 43.0 4.17e-01 100.0% 89.2%
3878278 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 44.0 3.31e-01 100.0% 64.7%
4672378 71.1.1.1 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin 0.51 42.0 2.88e-01 89.1% 43.8%
3181731 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 41.0 2.80e-01 92.7% 52.2%