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OR521070.1__WNO26972.1__SEA_SRISHMEG2525_92__00088
Bact-VirOR521070.1__WNO26972.1__SEA_SRISHMEG2525_92__00088
Identity
- Accession:
- OR521070 ↗
- Kingdom:
- phage
Quality
84.5
mean pLDDT
Taxonomy
TaxID: 3069519
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-18_62-80_345-429
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02511.21 best | Thy1 | 50.7 | 2.70e-13 | 94.9% | 49.2% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p5aC00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.96 | 94.0 | 7.28e-01 | 100.0% | 70.4% |
| 1kq4A00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.74 | 69.0 | 5.63e-01 | 98.3% | 68.5% |
| 3ah5B00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.66 | 60.0 | 4.87e-01 | 95.8% | 75.8% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.55 | 20.0 | 2.82e-01 | 95.8% | 63.6% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.54 | 29.0 | 2.91e-01 | 86.4% | 50.4% |
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 39.0 | 2.76e-01 | 79.7% | 33.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1716752 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.96 | 94.0 | 7.24e-01 | 100.0% | 70.8% |
| 4628182 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.87 | 82.0 | 6.16e-01 | 98.3% | 65.5% |
| 4060791 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.81 | 76.0 | 5.72e-01 | 98.3% | 62.0% |
| 4955043 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.81 | 68.0 | 6.20e-01 | 96.6% | 68.7% |
| 4102574 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.78 | 71.0 | 5.50e-01 | 95.8% | 77.5% |
| 1007250 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 71.0 | 5.72e-01 | 94.9% | 74.6% |
| 4992830 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.77 | 71.0 | 5.51e-01 | 95.8% | 64.0% |
| 5077404 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.76 | 71.0 | 5.39e-01 | 96.6% | 67.3% |
| 4982008 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.76 | 72.0 | 5.84e-01 | 98.3% | 70.5% |
| 4943595 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.75 | 71.0 | 5.49e-01 | 98.3% | 68.0% |
| 5066566 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.75 | 70.0 | 5.53e-01 | 98.3% | 70.9% |
| 4930760 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.74 | 68.0 | 5.06e-01 | 95.8% | 58.8% |
| 4152367 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.74 | 70.0 | 4.95e-01 | 99.2% | 67.1% |
| 4988219 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.73 | 65.0 | 4.96e-01 | 93.2% | 74.4% |
| 4133204 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.72 | 67.0 | 5.12e-01 | 96.6% | 65.0% |
| 4933142 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.72 | 68.0 | 5.29e-01 | 99.2% | 76.1% |
| 5046119 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.71 | 67.0 | 5.38e-01 | 98.3% | 74.5% |
| 5069296 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.71 | 66.0 | 4.99e-01 | 97.5% | 58.4% |
| 4933143 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.71 | 65.0 | 5.27e-01 | 96.6% | 65.0% |
| 5024487 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.68 | 62.0 | 5.01e-01 | 95.8% | 73.8% |
| 3961543 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.63 | 44.0 | 3.55e-01 | 70.3% | 78.2% |
| 3894415 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.61 | 47.0 | 4.48e-01 | 81.4% | 85.7% |
| 4026519 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.59 | 45.0 | 4.32e-01 | 80.5% | 85.9% |
| 4642256 | 3355.1.1.6 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › ArsB | 0.57 | 44.0 | 3.01e-01 | 83.1% | 98.4% |
| 3944424 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.53 | 45.0 | 3.20e-01 | 94.9% | 97.7% |
| None | — | 0.52 | 45.0 | 3.20e-01 | 95.8% | 97.7% |
D2
high
residues 86-209_300-340
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388__D99-198_300-332
D3
high
residues 221-296
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01844.30 best | HNH | 37.1 | 3.80e-09 | 63.2% | 97.9% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.79 | 49.0 | 4.12e-01 | 77.6% | 39.0% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.79 | 70.0 | 6.77e-01 | 94.7% | 88.0% |
| 1wimA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.77 | 46.0 | 4.32e-01 | 80.3% | 48.9% |
| 3t7lA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.77 | 45.0 | 4.62e-01 | 71.1% | 60.8% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.74 | 47.0 | 5.35e-01 | 78.9% | 89.1% |
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.62 | 39.0 | 4.58e-01 | 75.0% | 88.9% |
| 3goxA03 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.62 | 51.0 | 5.05e-01 | 98.7% | 85.2% |
| 7yuiB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 48.0 | 4.54e-01 | 89.5% | 98.9% |
| 2w0tA00 | 3.30.60.160 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.57 | 30.0 | 3.80e-01 | 78.9% | 90.7% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 33.0 | 3.76e-01 | 86.8% | 85.5% |
| 4dolA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.53 | 39.0 | 3.20e-01 | 80.3% | 88.5% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 43.0 | 3.22e-01 | 94.7% | 88.3% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3938379 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.85 | 52.0 | 5.62e-01 | 77.6% | 72.3% |
| 3703254 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.85 | 58.0 | 5.76e-01 | 80.3% | 67.5% |
| 3745376 | 376.1.3.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_2 | 0.85 | 49.0 | 4.93e-01 | 72.4% | 58.7% |
| 3739083 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.84 | 53.0 | 5.42e-01 | 75.0% | 65.3% |
| 4941657 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.81 | 61.0 | 6.15e-01 | 78.9% | 85.3% |
| 3846283 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 48.0 | 5.72e-01 | 78.9% | 92.0% |
| 3944337 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.78 | 65.0 | 5.29e-01 | 89.5% | 57.8% |
| 3976723 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.77 | 62.0 | 5.25e-01 | 86.8% | 54.4% |
| 3466575 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.77 | 49.0 | 5.25e-01 | 76.3% | 75.4% |
| 5019258 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.77 | 65.0 | 6.44e-01 | 90.8% | 87.5% |
| 3286658 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.76 | 66.0 | 5.46e-01 | 94.7% | 94.6% |
| 3326051 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.75 | 51.0 | 4.71e-01 | 92.1% | 55.8% |
| 5016552 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.75 | 61.0 | 5.40e-01 | 89.5% | 60.9% |
| 3428161 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.75 | 52.0 | 5.77e-01 | 98.7% | 91.7% |
| 3438467 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.74 | 44.0 | 4.21e-01 | 77.6% | 51.1% |
| 3928956 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.73 | 41.0 | 4.74e-01 | 72.4% | 76.4% |
| 3250498 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.73 | 52.0 | 4.73e-01 | 97.4% | 56.0% |
| 3931962 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 60.0 | 3.94e-01 | 90.8% | 38.0% |
| 5080395 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.71 | 59.0 | 5.16e-01 | 90.8% | 60.9% |
| 3066048 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.71 | 47.0 | 4.39e-01 | 90.8% | 56.0% |
| 3849360 | 376.1.3.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RIM2a_ZnF | 0.71 | 48.0 | 4.89e-01 | 78.9% | 70.7% |
| 5073918 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.71 | 59.0 | 5.48e-01 | 90.8% | 75.8% |
| 5082962 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.70 | 54.0 | 4.83e-01 | 84.2% | 58.2% |
| 3634446 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 39.0 | 4.92e-01 | 76.3% | 95.6% |
| 3380766 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.68 | 49.0 | 4.50e-01 | 96.1% | 58.0% |
| 3430765 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.67 | 47.0 | 4.31e-01 | 93.4% | 56.0% |
| 3963335 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.67 | 53.0 | 4.45e-01 | 86.8% | 90.7% |
| 3915497 | 378.1.2.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › Tox-GHH | 0.66 | 50.0 | 4.80e-01 | 81.6% | 84.4% |
| 3588377 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.66 | 58.0 | 5.32e-01 | 98.7% | 84.0% |
| 3906952 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.66 | 47.0 | 4.22e-01 | 88.2% | 53.8% |
| 3300469 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.65 | 35.0 | 4.21e-01 | 71.1% | 80.0% |
| 3932949 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.65 | 39.0 | 3.88e-01 | 75.0% | 56.2% |
| 1002459 | 378.1.1.13 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › His_Me_b4a2 | 0.65 | 39.0 | 4.62e-01 | 71.1% | 88.5% |
| 4015661 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 49.0 | 4.32e-01 | 80.3% | 81.0% |
| 3253507 | 376.1.3.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RH_dom | 0.63 | 43.0 | 4.50e-01 | 75.0% | 77.1% |
| 3928505 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.62 | 43.0 | 4.48e-01 | 72.4% | 78.6% |
| 3720327 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 47.0 | 4.25e-01 | 80.3% | 84.0% |
| 5061253 | 376.1.3.97 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Prok-RING_2 | 0.60 | 50.0 | 4.95e-01 | 92.1% | 86.3% |
| 3599588 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 53.0 | 4.61e-01 | 98.7% | 94.5% |
| 3245490 | 377.11.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › THAP domain › THAP domain › THAP | 0.56 | 44.0 | 3.69e-01 | 88.2% | 73.9% |
| 4985634 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.55 | 41.0 | 4.44e-01 | 77.6% | 100.0% |
| 3425275 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.55 | 46.0 | 4.21e-01 | 96.1% | 81.0% |
| 3414632 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.54 | 45.0 | 4.23e-01 | 88.2% | 95.6% |
| 3217480 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 32.0 | 3.57e-01 | 85.5% | 85.5% |
D4
medium
residues 430-492
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02511.21 best | Thy1 | 27.7 | 2.90e-06 | 79.4% | 21.5% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p5aC00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.99 | 96.0 | 6.21e-01 | 100.0% | 28.3% |
| 2xkrA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 50.0 | 3.09e-01 | 92.1% | 22.0% |
| 3ifrB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 45.0 | 3.06e-01 | 81.0% | 61.2% |
| 1dl2A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.60 | 52.0 | 3.07e-01 | 98.4% | 78.8% |
| 1qazA00 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.60 | 50.0 | 3.15e-01 | 95.2% | 35.9% |
| 3cuxA02 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.57 | 47.0 | 3.82e-01 | 92.1% | 79.3% |
| 6tqpA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 46.0 | 3.66e-01 | 95.2% | 51.5% |
| 8alzB08 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.55 | 46.0 | 3.71e-01 | 95.2% | 96.2% |
| 2ckwA04 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.55 | 45.0 | 3.86e-01 | 93.7% | 68.2% |
| 2aboA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.54 | 44.0 | 3.63e-01 | 96.8% | 51.1% |
| 3gwqA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.53 | 45.0 | 3.10e-01 | 96.8% | 37.8% |
| 6zhhA01 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.53 | 45.0 | 3.35e-01 | 100.0% | 51.7% |
| 3dc4A00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.53 | 39.0 | 2.56e-01 | 81.0% | 27.5% |
| 5fxdA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.52 | 38.0 | 2.64e-01 | 79.4% | 27.5% |
| 3b9wA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.52 | 44.0 | 2.79e-01 | 95.2% | 76.2% |
| 1m70A01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.51 | 37.0 | 3.34e-01 | 77.8% | 97.8% |
| 3gqvA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 37.0 | 2.64e-01 | 77.8% | 89.5% |
| 2qm0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 45.0 | 3.00e-01 | 100.0% | 92.4% |
| 2lfcA00 | 3.90.700.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0.50 | 42.0 | 3.25e-01 | 96.8% | 74.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1716752 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.99 | 95.0 | 6.17e-01 | 100.0% | 27.9% |
| 3587997 | 5073.1.2.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Copper efflux ATPase transmembrane domain | 0.64 | 50.0 | 3.45e-01 | 87.3% | 84.3% |
| 3843567 | 3554.1.1.4 ↗ | a+b duplicates or obligate multimers › protein of unknown function (eca1910) › protein of unknown function (eca1910) › protein of unknown function (eca1910) › TF_AP-2 | 0.62 | 44.0 | 3.55e-01 | 74.6% | 80.8% |
| 3410682 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.59 | 50.0 | 3.23e-01 | 98.4% | 47.5% |
| 3286007 | 3844.2.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG | 0.59 | 48.0 | 3.24e-01 | 92.1% | 38.8% |
| 4484272 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 48.0 | 3.23e-01 | 93.7% | 93.5% |
| 1828364 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.58 | 47.0 | 3.37e-01 | 88.9% | 64.6% |
| 3480129 | 6092.1.1.1 ↗ | alpha bundles › Helical extension domain in Regulator of G-protein signaling 9 › Helical extension domain in Regulator of G-protein signaling 9 › Helical extension domain in Regulator of G-protein signaling 9 › RGS_DHEX | 0.57 | 42.0 | 3.73e-01 | 81.0% | 71.6% |
| 4303429 | 109.4.1.1253 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Atp25_C | 0.56 | 48.0 | 3.05e-01 | 96.8% | 28.5% |
| 3412885 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 44.0 | 4.44e-01 | 92.1% | 83.1% |
| 3734403 | 1065.1.1.1 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › SPX | 0.56 | 46.0 | 3.40e-01 | 96.8% | 85.4% |
| 3498224 | 109.46.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH | 0.56 | 44.0 | 3.40e-01 | 93.7% | 52.7% |
| 3431026 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.54 | 40.0 | 3.58e-01 | 95.2% | 54.7% |
| 3253606 | 2003.1.1.21 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase,DUF1731 | 0.53 | 45.0 | 2.93e-01 | 100.0% | 62.1% |
| 4942494 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 43.0 | 3.02e-01 | 98.4% | 66.7% |
| 4965091 | 101.1.2.908 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF5787 | 0.50 | 40.0 | 3.81e-01 | 93.7% | 83.7% |