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OR521076.1__WNO27559.1__SEA_AGEOFDAPAGE_80__00079
Bact-VirOR521076.1__WNO27559.1__SEA_AGEOFDAPAGE_80__00079
Identity
- Accession:
- OR521076 ↗
- Kingdom:
- phage
Quality
96.9
mean pLDDT
Taxonomy
TaxID: 3077822
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-58
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nuwA02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.70 | 59.0 | 3.98e-01 | 100.0% | 25.4% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.68 | 56.0 | 4.53e-01 | 98.2% | 46.4% |
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.66 | 42.0 | 3.76e-01 | 85.5% | 44.4% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.63 | 53.0 | 4.65e-01 | 100.0% | 65.2% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 47.0 | 4.91e-01 | 98.2% | 94.0% |
| 2jpnA00 | 1.20.1280.210 | Mainly Alpha › Up-down Bundle › Monooxygenase › Uncharacterised protein UvsW.1 | 0.61 | 49.0 | 4.42e-01 | 100.0% | 64.6% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 53.0 | 4.38e-01 | 100.0% | 81.2% |
| 2bzlA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.60 | 50.0 | 3.23e-01 | 100.0% | 19.0% |
| 3pffA05 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.60 | 41.0 | 2.89e-01 | 72.7% | 49.7% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 48.0 | 3.66e-01 | 96.4% | 37.9% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.58 | 48.0 | 4.24e-01 | 96.4% | 62.5% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.58 | 41.0 | 3.89e-01 | 80.0% | 62.1% |
| 2p58C00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 43.0 | 3.43e-01 | 92.7% | 39.3% |
| 1y1pA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 47.0 | 2.93e-01 | 98.2% | 15.9% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.56 | 47.0 | 4.38e-01 | 98.2% | 74.0% |
| 2i1yA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 46.0 | 3.00e-01 | 100.0% | 19.5% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 38.0 | 3.32e-01 | 70.9% | 50.0% |
| 2g80A02 | 1.10.720.60 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.55 | 37.0 | 3.33e-01 | 70.9% | 82.1% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.55 | 45.0 | 3.06e-01 | 94.5% | 28.6% |
| 4bx8A04 | 1.25.40.850 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Sec1/Munc18 (SM) protein, domain 3b | 0.54 | 42.0 | 3.69e-01 | 90.9% | 54.3% |
| 8h6rA01 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.52 | 42.0 | 3.66e-01 | 89.1% | 68.2% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.52 | 44.0 | 3.09e-01 | 100.0% | 67.7% |
| 3ejnA03 | 1.20.120.840 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SusD-like, tetratrico peptide repeats domain | 0.51 | 40.0 | 3.26e-01 | 89.1% | 44.1% |
| 2kckA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 36.0 | 3.04e-01 | 89.1% | 40.2% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993593 | 198.1.1.27 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 | 0.69 | 59.0 | 5.28e-01 | 100.0% | 68.8% |
| 5040720 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.66 | 54.0 | 3.52e-01 | 100.0% | 36.3% |
| 3468869 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 53.0 | 5.39e-01 | 100.0% | 96.4% |
| 3592523 | 4351.1.1.0 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like | 0.65 | 56.0 | 3.71e-01 | 98.2% | 29.6% |
| 3865098 | 4351.1.1.1 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 | 0.65 | 55.0 | 3.66e-01 | 98.2% | 28.5% |
| 3382157 | 4351.1.1.1 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 | 0.64 | 52.0 | 3.48e-01 | 96.4% | 25.7% |
| 3707287 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.64 | 55.0 | 5.38e-01 | 100.0% | 91.7% |
| 3626320 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.63 | 53.0 | 4.28e-01 | 100.0% | 48.2% |
| 3202292 | 101.38.1.3 ↗ | alpha arrays › HTH › DNA-binding domain of the replication initiator protein ColE2-Rep › DNA-binding domain of the replication initiator protein ColE2-Rep › DUF6891 | 0.62 | 51.0 | 4.85e-01 | 100.0% | 90.0% |
| 3986130 | 2008.1.1.67 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecC_C | 0.62 | 51.0 | 3.28e-01 | 100.0% | 17.7% |
| 5055339 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.62 | 52.0 | 3.41e-01 | 100.0% | 22.6% |
| 4267024 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.60 | 44.0 | 4.00e-01 | 80.0% | 62.7% |
| 3495925 | 4351.1.1.0 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like | 0.59 | 48.0 | 3.25e-01 | 98.2% | 27.1% |
| 3650037 | 604.1.1.127 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › EMC4 | 0.59 | 49.0 | 3.92e-01 | 100.0% | 66.4% |
| 5060020 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.58 | 46.0 | 4.39e-01 | 87.3% | 81.5% |
| 4388317 | 2005.1.1.25 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › HIGH_NTase1 | 0.58 | 49.0 | 3.10e-01 | 98.2% | 32.3% |
| 3607327 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 48.0 | 4.71e-01 | 100.0% | 91.7% |
| 3339002 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.57 | 43.0 | 4.02e-01 | 98.2% | 62.7% |
| 3519081 | 101.1.17.16 ↗ | alpha arrays › HTH › HTH › FF domain › FF_RHG35_4th | 0.57 | 49.0 | 4.77e-01 | 98.2% | 90.0% |
| 3390249 | 4003.1.1.0 ↗ | alpha arrays › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins | 0.56 | 46.0 | 4.28e-01 | 100.0% | 73.3% |
| 4992678 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.56 | 37.0 | 3.79e-01 | 76.4% | 70.9% |
| 3934751 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 46.0 | 4.55e-01 | 100.0% | 95.0% |
| 3894364 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 42.0 | 4.23e-01 | 98.2% | 92.7% |
| 3907900 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.54 | 44.0 | 4.31e-01 | 100.0% | 88.3% |
| 3547935 | 3204.1.1.0 ↗ | extended segments › N-terminal regulatory segment of carnitine palmitoyltransferase 1A › N-terminal regulatory segment of carnitine palmitoyltransferase 1A › N-terminal regulatory segment of carnitine palmitoyltransferase 1A | 0.53 | 36.0 | 2.98e-01 | 70.9% | 37.3% |
| 3669577 | 4202.1.1.0 ↗ | alpha duplicates or obligate multimers › Hermes dimerisation domain › Hermes dimerisation domain › Hermes dimerisation domain | 0.52 | 44.0 | 4.26e-01 | 100.0% | 87.7% |
| 3891361 | 4202.1.1.0 ↗ | alpha duplicates or obligate multimers › Hermes dimerisation domain › Hermes dimerisation domain › Hermes dimerisation domain | 0.52 | 42.0 | 4.20e-01 | 100.0% | 90.0% |
| 3458166 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 45.0 | 4.39e-01 | 100.0% | 91.7% |
| 2401680 | 3960.1.1.1 ↗ | alpha arrays › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › AadA_C | 0.52 | 38.0 | 3.17e-01 | 81.8% | 64.5% |
| 3952920 | 3625.1.1.1 ↗ | alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › Cmr2_hel_dom2 | 0.52 | 42.0 | 3.78e-01 | 100.0% | 82.4% |
| 3661620 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 42.0 | 4.09e-01 | 100.0% | 87.7% |
| 3317835 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 42.0 | 3.97e-01 | 100.0% | 81.4% |
| 3338071 | 2484.1.1.215 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 | 0.50 | 42.0 | 3.10e-01 | 100.0% | 34.5% |