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OR521080.1__WNO27828.1__SEA_HUWBERT_77__00077

Bact-Vir

OR521080.1__WNO27828.1__SEA_HUWBERT_77__00077

Identity

Accession:
OR521080 ↗
Kingdom:
phage

Quality

77.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-50
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.76 65.0 5.29e-01 100.0% 57.0%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 48.0 4.09e-01 85.1% 44.7%
1wg1A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 48.0 4.26e-01 78.7% 66.2%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 55.0 4.65e-01 100.0% 72.4%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 49.0 3.62e-01 87.2% 31.7%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 49.0 4.34e-01 87.2% 56.8%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 47.0 2.76e-01 78.7% 20.8%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.64 51.0 3.90e-01 100.0% 48.9%
1x4dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 47.0 3.87e-01 89.4% 52.0%
1fvqA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 46.0 4.12e-01 87.2% 54.2%
2kt2A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 47.0 4.28e-01 89.4% 59.4%
1mwyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 44.0 3.98e-01 83.0% 56.2%
2xmjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 46.0 4.26e-01 89.4% 65.1%
2kyzA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 44.0 4.03e-01 89.4% 58.2%
1qupA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 41.0 3.73e-01 76.6% 50.0%
2cdqA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 47.0 4.14e-01 100.0% 66.7%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.59 46.0 3.40e-01 100.0% 84.1%
1i2vA00 3.30.30.10 Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like 0.59 43.0 4.44e-01 87.2% 97.7%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 3.94e-01 85.1% 94.2%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.58 47.0 4.36e-01 100.0% 86.6%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.58 44.0 3.64e-01 87.2% 52.1%
1kviA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 43.0 3.76e-01 89.4% 51.9%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 46.0 3.43e-01 93.6% 46.9%
2gaxA00 3.40.1490.10 Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 0.57 47.0 3.45e-01 95.7% 82.1%
3mahA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 45.0 4.10e-01 100.0% 65.7%
1whyA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 41.0 3.70e-01 87.2% 55.6%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.46e-01 80.9% 92.9%
1cc8A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 41.0 3.73e-01 87.2% 58.3%
3t5xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.00e-01 95.7% 80.6%
4g1uD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 46.0 2.96e-01 100.0% 86.8%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 43.0 3.32e-01 93.6% 47.3%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 45.0 3.90e-01 100.0% 61.4%
2crlA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 40.0 3.72e-01 87.2% 59.4%
7ovuA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 47.0 3.16e-01 100.0% 45.1%
7ewfB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 47.0 4.02e-01 95.7% 72.0%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.58e-01 80.9% 95.3%
2kkhA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 3.50e-01 89.4% 54.7%
1whxA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 39.0 3.19e-01 89.4% 40.5%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.86e-01 100.0% 79.7%
2hqyA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 43.0 3.27e-01 100.0% 57.7%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 45.0 3.62e-01 100.0% 67.4%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 44.0 3.19e-01 100.0% 41.1%
1g6sA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.51 43.0 2.88e-01 100.0% 26.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 45.0 3.19e-01 100.0% 42.6%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3976762 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.81 63.0 5.31e-01 87.2% 52.0%
4483441 304.14.1.0 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) 0.78 61.0 5.25e-01 87.2% 54.7%
3386960 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.76 60.0 5.39e-01 87.2% 64.6%
1159603 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 65.0 5.52e-01 100.0% 65.4%
4603561 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.75 56.0 4.77e-01 87.2% 48.8%
5029541 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 61.0 5.06e-01 100.0% 54.4%
3417265 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.70 50.0 4.06e-01 76.6% 47.8%
4996524 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 59.0 3.96e-01 100.0% 26.7%
5028313 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 57.0 4.97e-01 100.0% 65.0%
4992659 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 58.0 4.45e-01 100.0% 45.2%
5556 242.1.1.4 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Endonuc_subdom 0.68 57.0 4.61e-01 100.0% 64.3%
4993850 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 57.0 4.65e-01 100.0% 63.2%
4979949 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 51.0 4.38e-01 85.1% 61.3%
3581054 390.1.1.1 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.66 51.0 4.76e-01 87.2% 66.7%
4993482 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 56.0 4.89e-01 100.0% 64.0%
4961020 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.66 49.0 4.44e-01 87.2% 58.5%
5013039 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 54.0 4.63e-01 100.0% 56.5%
4030325 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 53.0 4.08e-01 93.6% 50.4%
4264348 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 55.0 4.83e-01 100.0% 69.3%
5052153 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 55.0 4.25e-01 100.0% 44.3%
4980062 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.65 50.0 4.05e-01 87.2% 44.2%
3447217 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.65 47.0 4.19e-01 91.5% 52.0%
4547498 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 48.0 2.99e-01 80.9% 61.1%
3293767 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.64 46.0 4.10e-01 87.2% 50.7%
3803435 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.64 46.0 4.27e-01 87.2% 58.5%
4302858 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.63 51.0 4.63e-01 100.0% 64.3%
4956901 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.63 49.0 4.13e-01 89.4% 54.1%
3265391 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.63 46.0 4.13e-01 87.2% 55.7%
4982812 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.62 48.0 4.22e-01 89.4% 57.3%
3293450 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.62 44.0 4.02e-01 87.2% 54.3%
4014842 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.62 44.0 4.12e-01 87.2% 58.5%
4926825 304.4.1.2 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase 0.62 46.0 3.68e-01 85.1% 50.5%
3806470 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.61 45.0 4.30e-01 87.2% 66.7%
3301434 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.61 45.0 3.80e-01 87.2% 45.9%
4975002 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 44.0 3.87e-01 83.0% 57.5%
3674421 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.61 44.0 3.97e-01 87.2% 54.3%
3663496 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.60 43.0 3.91e-01 89.4% 54.3%
3255588 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 43.0 4.05e-01 87.2% 60.0%
3617968 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 3.97e-01 95.7% 70.5%
3807180 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.59 45.0 3.97e-01 91.5% 54.7%
4972516 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.59 45.0 3.88e-01 87.2% 63.7%
3855055 304.9.1.58 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Nup35_RRM_2 0.59 43.0 3.50e-01 87.2% 39.0%
3651506 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 42.0 3.83e-01 87.2% 55.7%
4191065 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.58 43.0 3.91e-01 89.4% 56.0%
3433562 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 43.0 3.82e-01 89.4% 57.5%
3836283 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.58 42.0 3.94e-01 89.4% 61.5%
3188029 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 48.0 4.32e-01 100.0% 92.9%
3645069 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.57 41.0 3.63e-01 87.2% 48.8%
3803359 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.57 45.0 3.88e-01 91.5% 55.0%
3236950 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.57 48.0 4.31e-01 100.0% 80.0%
4968297 304.4.1.2 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase 0.57 43.0 3.66e-01 87.2% 55.3%
4284044 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 3.06e-01 85.1% 49.3%
3438320 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.56 43.0 3.86e-01 93.6% 60.0%
137913 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.56 40.0 3.38e-01 87.2% 41.1%
3685642 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.55 45.0 3.93e-01 100.0% 86.3%
3340888 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.55 40.0 3.76e-01 89.4% 63.1%
138898 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.54 39.0 3.73e-01 87.2% 66.1%
3573562 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 45.0 2.60e-01 91.5% 25.9%
3602011 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 45.0 3.16e-01 100.0% 53.9%
4929004 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.53 39.0 3.67e-01 89.4% 63.1%
3936571 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.76e-01 100.0% 77.3%
3830419 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.58e-01 95.7% 67.5%
4979807 241.1.1.6 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN 0.51 38.0 3.24e-01 93.6% 64.0%
4002798 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.51 45.0 3.93e-01 100.0% 87.1%
3478290 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.51 36.0 3.45e-01 89.4% 63.1%
5049150 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 42.0 3.85e-01 100.0% 87.7%
3577575 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.50 39.0 3.52e-01 100.0% 72.5%
3174929 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.50 36.0 3.33e-01 89.4% 61.3%