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OR521081.1__WNO27886.1__SEA_HALO3_17__00017
Bact-VirOR521081.1__WNO27886.1__SEA_HALO3_17__00017
Identity
- Accession:
- OR521081 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Taxonomy
TaxID: 3077826
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-170
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.67 | 32.0 | 4.38e-01 | 90.2% | 90.7% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.60 | 29.0 | 3.75e-01 | 81.7% | 82.9% |
| 2c9aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 34.0 | 4.10e-01 | 92.8% | 87.6% |
| 2f8xC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 32.0 | 3.83e-01 | 92.8% | 89.4% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.55 | 32.0 | 3.49e-01 | 76.5% | 69.7% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 33.0 | 3.49e-01 | 88.2% | 69.9% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 26.0 | 2.97e-01 | 88.2% | 64.9% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 28.0 | 3.36e-01 | 84.3% | 83.0% |
| 5i47B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 24.0 | 2.86e-01 | 92.2% | 64.2% |
| 6h5bB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 27.0 | 3.10e-01 | 96.1% | 68.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960055 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.67 | 52.0 | 5.47e-01 | 96.1% | 89.9% |
| 4180206 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.60 | 39.0 | 4.48e-01 | 91.5% | 92.4% |
| 3371009 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.55 | 37.0 | 3.94e-01 | 92.8% | 76.3% |
| 5036974 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 27.0 | 3.19e-01 | 95.4% | 71.2% |
| 3260049 | 314.1.1.12 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat | 0.51 | 42.0 | 3.48e-01 | 86.9% | 81.5% |
| 3254228 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.50 | 26.0 | 2.96e-01 | 96.1% | 62.7% |
| 3891410 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.50 | 23.0 | 2.98e-01 | 91.5% | 77.5% |
D2
high
residues 300-397
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 45.0 | 4.30e-01 | 82.7% | 70.4% |
| 4ackB00 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.54 | 44.0 | 3.82e-01 | 89.8% | 75.8% |
| 3kdaA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 38.0 | 2.71e-01 | 73.5% | 66.2% |
| 2rfqC03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 41.0 | 3.41e-01 | 81.6% | 59.4% |
| 4rm7A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 40.0 | 3.60e-01 | 82.7% | 67.6% |
| 3dxqB02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.52 | 45.0 | 3.62e-01 | 100.0% | 67.3% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 37.0 | 3.81e-01 | 78.6% | 78.1% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 37.0 | 3.63e-01 | 74.5% | 89.7% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 39.0 | 3.38e-01 | 81.6% | 67.5% |
| 2or0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 39.0 | 3.24e-01 | 83.7% | 54.3% |
| 3nhiA02 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.51 | 45.0 | 3.97e-01 | 100.0% | 78.1% |
| 2jbrA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 39.0 | 3.24e-01 | 83.7% | 55.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3824951 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 42.0 | 4.26e-01 | 79.6% | 75.8% |
| 3336245 | 109.4.1.1577 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS7_HB | 0.56 | 48.0 | 3.34e-01 | 95.9% | 90.7% |
| 3931209 | 101.1.10.17 ↗ | alpha arrays › HTH › HTH › Cyclin-like › CycT2-like_C | 0.56 | 43.0 | 4.14e-01 | 82.7% | 77.4% |
| 2670370 | 4021.1.1.2 ↗ | alpha arrays › alpha-helical domain in 2-methylcitrate dehydratase PrpD › alpha-helical domain in 2-methylcitrate dehydratase PrpD › alpha-helical domain in 2-methylcitrate dehydratase PrpD › MmgE_PrpD_N | 0.54 | 47.0 | 3.39e-01 | 96.9% | 93.8% |
| 3267992 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 43.0 | 2.85e-01 | 86.7% | 43.8% |
| 3640525 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 39.0 | 3.24e-01 | 81.6% | 62.1% |
| 3194853 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.50 | 39.0 | 2.75e-01 | 85.7% | 34.6% |
| 415175 | 109.19.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Immunity Factor for SPN › Immunity Factor for SPN › IFS | 0.50 | 41.0 | 3.44e-01 | 89.8% | 63.0% |
| 3794257 | 206.1.1.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 | 0.50 | 44.0 | 2.91e-01 | 98.0% | 79.3% |
| 3644185 | 601.1.2.68 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DUF1218 | 0.50 | 37.0 | 3.13e-01 | 77.6% | 68.5% |
D3
medium
residues 232-281