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OR521085.1__WNO28345.1__SEA_PSONYX_35__00035
Bact-VirOR521085.1__WNO28345.1__SEA_PSONYX_35__00035
Identity
- Accession:
- OR521085 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 140-203
Domain cluster:
rep: OP434460.1__UYL88100.1__SEA_PYTHEAS_72__00072__D132-187
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ownA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.70 | 37.0 | 2.44e-01 | 71.9% | 13.3% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.66 | 46.0 | 4.02e-01 | 71.9% | 81.1% |
| 4jdmA02 | 6.10.250.2680 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 35.0 | 3.62e-01 | 93.8% | 55.6% |
| 2cteA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 44.0 | 4.16e-01 | 75.0% | 94.9% |
| 2oafB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 35.0 | 2.70e-01 | 71.9% | 24.3% |
| 5d1kB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 48.0 | 4.50e-01 | 84.4% | 76.6% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 47.0 | 4.66e-01 | 84.4% | 89.4% |
| 2xb1A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 49.0 | 4.24e-01 | 92.2% | 66.7% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 42.0 | 3.17e-01 | 79.7% | 46.0% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 3.71e-01 | 100.0% | 46.7% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.66e-01 | 82.8% | 68.3% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 46.0 | 4.46e-01 | 93.8% | 82.2% |
| 4b7yD00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 44.0 | 3.83e-01 | 87.5% | 97.9% |
| 2yjgA02 | 3.40.50.11440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain | 0.54 | 40.0 | 2.81e-01 | 82.8% | 100.0% |
| 4kfzA02 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.54 | 40.0 | 4.05e-01 | 81.2% | 83.1% |
| 3f0hA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 41.0 | 3.72e-01 | 87.5% | 91.7% |
| 4oyvA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 47.0 | 3.70e-01 | 100.0% | 85.5% |
| 3kzgA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 46.0 | 3.73e-01 | 100.0% | 91.5% |
| 1nrjB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 3.22e-01 | 95.3% | 74.9% |
| 1vwxr00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.52 | 44.0 | 3.64e-01 | 98.4% | 79.2% |
| 2rghA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 2.92e-01 | 93.8% | 82.3% |
| 1j5yA02 | 3.30.1340.20 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain | 0.51 | 38.0 | 3.21e-01 | 78.1% | 96.3% |
| 2fh5B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 3.08e-01 | 93.8% | 54.8% |
| 6d6zA02 | 3.40.50.11440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain | 0.50 | 38.0 | 2.69e-01 | 85.9% | 97.0% |
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.50 | 41.0 | 2.86e-01 | 95.3% | 97.6% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.66 | 49.0 | 2.90e-01 | 79.7% | 60.8% | |
| 3714160 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.66 | 48.0 | 4.33e-01 | 78.1% | 90.0% |
| 3726704 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 43.0 | 4.70e-01 | 85.9% | 84.9% |
| 5066586 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 44.0 | 4.88e-01 | 76.6% | 92.0% |
| 3725637 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.62 | 44.0 | 3.81e-01 | 73.4% | 100.0% |
| 4882574 | 375.1.1.35 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_2753_ZBP | 0.62 | 44.0 | 4.55e-01 | 75.0% | 91.4% |
| 3233467 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.62 | 44.0 | 4.74e-01 | 81.2% | 87.3% |
| 3775055 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.60 | 50.0 | 2.89e-01 | 92.2% | 75.7% |
| 4961820 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 43.0 | 4.44e-01 | 76.6% | 81.7% |
| 5046461 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.58 | 50.0 | 3.60e-01 | 100.0% | 93.5% |
| 3601299 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 47.0 | 3.92e-01 | 96.9% | 99.2% |
| 3243038 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.57 | 44.0 | 2.77e-01 | 100.0% | 15.7% |
| 3399231 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 45.0 | 4.32e-01 | 87.5% | 96.0% |
| 3629973 | 376.1.3.55 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PF27108 | 0.56 | 47.0 | 4.73e-01 | 90.6% | 100.0% |
| 4929359 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.56 | 39.0 | 4.10e-01 | 82.8% | 85.5% |
| 4936364 | 2007.13.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit › CobN-Mg_chel | 0.56 | 41.0 | 2.88e-01 | 78.1% | 77.7% |
| 3755165 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 36.0 | 3.59e-01 | 70.3% | 100.0% |
| 3790774 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 45.0 | 3.76e-01 | 100.0% | 80.0% |
| 3715056 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.52 | 43.0 | 3.09e-01 | 100.0% | 53.5% |
| 4111686 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 47.0 | 3.88e-01 | 100.0% | 63.6% |
| 3413832 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 39.0 | 3.73e-01 | 82.8% | 98.7% |
| None | — | 0.51 | 43.0 | 2.81e-01 | 93.8% | 23.6% | |
| 3564841 | 2004.1.1.168 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRPRB | 0.51 | 43.0 | 2.89e-01 | 93.8% | 40.4% |
| 3608772 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.51 | 46.0 | 2.78e-01 | 100.0% | 82.7% |
| 3256843 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.51 | 46.0 | 3.84e-01 | 98.4% | 88.6% |
D2
medium
residues 17-139
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 38.0 | 4.29e-01 | 74.0% | 77.1% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 38.0 | 4.14e-01 | 75.6% | 74.0% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 40.0 | 4.16e-01 | 76.4% | 68.4% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.60 | 42.0 | 4.40e-01 | 79.7% | 79.8% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 32.0 | 3.66e-01 | 74.0% | 69.6% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 4.20e-01 | 75.6% | 78.7% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 32.0 | 3.57e-01 | 73.2% | 67.0% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.15e-01 | 75.6% | 79.6% |
| 2budA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 34.0 | 3.91e-01 | 72.4% | 81.5% |
| 4k8wA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.54 | 39.0 | 4.06e-01 | 75.6% | 96.6% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.60e-01 | 75.6% | 64.9% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.91e-01 | 78.0% | 84.6% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.51 | 39.0 | 3.68e-01 | 80.5% | 100.0% |
| 1ms9A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 37.0 | 2.67e-01 | 75.6% | 95.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3304602 | 4.1.1.427 ↗ | beta barrels › SH3 › SH3 › SH3 › F-box | 0.73 | 36.0 | 4.15e-01 | 71.5% | 63.2% |
| 3935469 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.70 | 39.0 | 5.13e-01 | 72.4% | 98.6% |
| 3500542 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 44.0 | 5.05e-01 | 73.2% | 88.9% |
| 3616769 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.67 | 44.0 | 4.93e-01 | 95.9% | 85.3% |
| 3764432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 36.0 | 4.87e-01 | 75.6% | 100.0% |
| 3507146 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 42.0 | 4.96e-01 | 75.6% | 92.9% |
| 3582876 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.66 | 42.0 | 4.55e-01 | 75.6% | 75.2% |
| 4000622 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.65 | 41.0 | 4.15e-01 | 92.7% | 64.2% |
| 3622139 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 41.0 | 4.76e-01 | 73.2% | 88.9% |
| 3794500 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.62 | 45.0 | 3.88e-01 | 74.0% | 92.4% |
| 3585538 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.61 | 42.0 | 4.54e-01 | 79.7% | 85.0% |
| 3185466 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.61 | 46.0 | 3.88e-01 | 78.0% | 99.0% |
| 4020073 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 35.0 | 4.52e-01 | 72.4% | 100.0% |
| 3315471 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.61 | 40.0 | 4.75e-01 | 84.6% | 97.6% |
| 3238955 | 4.1.1.377 ↗ | beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like | 0.60 | 38.0 | 4.59e-01 | 72.4% | 96.2% |
| 3256053 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.60 | 40.0 | 4.63e-01 | 79.7% | 93.3% |
| 3659149 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 40.0 | 4.35e-01 | 75.6% | 81.0% |
| 3205559 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.59 | 44.0 | 4.22e-01 | 78.0% | 73.8% |
| 3557649 | 4.8.1.20 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N | 0.59 | 37.0 | 3.93e-01 | 78.0% | 72.4% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.59 | 41.0 | 4.78e-01 | 73.2% | 100.0% |
| 1323508 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.58 | 42.0 | 4.08e-01 | 74.8% | 96.4% |
| 3730835 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.57 | 39.0 | 4.43e-01 | 83.7% | 91.6% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.56 | 46.0 | 4.89e-01 | 93.5% | 98.2% |
| 4954224 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.56 | 38.0 | 4.22e-01 | 74.0% | 89.5% |
| 3867207 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.55 | 38.0 | 4.26e-01 | 78.9% | 91.6% |
| 4549698 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.54 | 39.0 | 4.28e-01 | 82.9% | 95.8% |
| 4928053 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 37.0 | 3.77e-01 | 73.2% | 100.0% |
| 3881192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 36.0 | 3.22e-01 | 70.7% | 51.2% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.52 | 41.0 | 3.65e-01 | 85.4% | 86.1% |
| 4988604 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.51 | 36.0 | 3.79e-01 | 73.2% | 100.0% |
| 3231582 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.50 | 38.0 | 3.33e-01 | 78.9% | 96.8% |