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OR521085.1__WNO28432.1__SEA_PSONYX_130__00125

Bact-Vir

OR521085.1__WNO28432.1__SEA_PSONYX_130__00125

Identity

Accession:
OR521085 ↗
Kingdom:
phage

Quality

74.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Corynebacterium_phage_PSonyx

TaxID: 3051764

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 179-243
PDB
Domain cluster: rep: MZ028627.1__QWS68241.1__SEA_VANLEE_124__00124__D150-208
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24029.2 best DUF7340 29.1 8.60e-07 87.7% 95.2%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d0qA00 3.90.580.10 Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain 0.66 44.0 3.83e-01 84.6% 44.1%
2aklA01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.63 36.0 4.16e-01 80.0% 83.7%
5flxf00 6.20.50.150 Special › Other non-globular › N-terminal domain of TfIIb › 0.62 35.0 3.42e-01 72.3% 47.9%
1jj2Y00 2.20.25.30 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 44.0 4.23e-01 86.2% 65.8%
3wz2B00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.58 46.0 3.29e-01 92.3% 91.2%
2riqA02 2.20.25.630 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.58 37.0 3.89e-01 84.6% 71.7%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.58 46.0 3.75e-01 86.2% 85.8%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.58 39.0 4.26e-01 87.7% 92.0%
1pg5B02 2.30.30.20 Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain 0.56 44.0 4.58e-01 92.3% 100.0%
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 48.0 3.53e-01 100.0% 66.0%
2w5qA01 3.30.1120.170 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.55 45.0 4.00e-01 89.2% 86.0%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.37e-01 95.4% 41.9%
2xa7M01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 43.0 3.55e-01 86.2% 75.8%
3rlfF02 3.10.650.10 Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like 0.55 42.0 3.94e-01 84.6% 68.3%
2e4qA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.54 45.0 3.84e-01 93.8% 85.2%
3floB00 1.10.3200.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger 0.54 42.0 3.21e-01 92.3% 32.8%
3gaaB00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.53 45.0 3.08e-01 95.4% 86.8%
3gmiA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 40.0 2.74e-01 86.2% 24.2%
2l1sA00 3.10.450.160 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr 0.51 38.0 3.58e-01 87.7% 65.1%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.50 43.0 3.62e-01 100.0% 84.9%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975908 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.77 54.0 3.69e-01 95.4% 21.8%
4943798 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.75 49.0 3.38e-01 90.8% 20.0%
4928885 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 42.0 4.92e-01 83.1% 80.0%
4934186 375.1.1.322 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Cas12f1-like_TNB 0.74 41.0 5.10e-01 73.8% 100.0%
5055179 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.72 48.0 3.36e-01 92.3% 21.4%
4614679 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 48.0 5.20e-01 92.3% 92.0%
3928378 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 55.0 5.03e-01 96.9% 64.7%
4203469 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.68 46.0 4.89e-01 95.4% 83.6%
1489671 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.66 45.0 4.77e-01 90.8% 83.9%
4123157 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.66 45.0 4.81e-01 90.8% 85.5%
4031797 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.66 45.0 4.76e-01 90.8% 85.5%
4239498 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.65 45.0 4.75e-01 90.8% 87.3%
5047404 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 46.0 4.86e-01 75.4% 94.5%
3386489 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.64 50.0 3.62e-01 100.0% 31.8%
5050229 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 41.0 4.04e-01 89.2% 62.9%
4103373 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.62 44.0 4.66e-01 90.8% 90.9%
5053183 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 33.0 2.65e-01 70.8% 25.6%
3590612 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.61 36.0 4.34e-01 75.4% 95.0%
3669824 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.61 39.0 4.21e-01 89.2% 78.2%
5030541 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.59 34.0 3.99e-01 78.5% 87.5%
3441818 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 37.0 3.96e-01 84.6% 74.5%
3579412 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 34.0 3.42e-01 89.2% 60.0%
8068 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.55 36.0 4.12e-01 72.3% 100.0%
3616640 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 43.0 3.69e-01 86.2% 56.2%
3405299 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 45.0 3.20e-01 95.4% 41.3%
3970247 9.11.1.0 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.52 42.0 3.66e-01 95.4% 74.5%
3403082 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 43.0 3.10e-01 95.4% 33.0%
4991860 3754.1.1.1 ↗ alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 0.52 42.0 2.83e-01 96.9% 53.2%
3844188 386.1.1.289 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30903 0.52 32.0 3.36e-01 90.8% 68.3%
3415237 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 42.0 3.01e-01 93.8% 41.9%
3742452 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 46.0 2.90e-01 100.0% 30.0%
5010276 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.51 43.0 3.44e-01 93.8% 99.2%
3765582 386.1.1.289 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30903 0.51 37.0 3.50e-01 95.4% 63.7%
3499778 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 32.0 3.42e-01 90.8% 77.8%
3517444 375.10.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha 0.50 41.0 4.08e-01 92.3% 89.7%
3238170 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.50 37.0 3.94e-01 78.5% 98.2%
D2 medium residues 109-178
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.83 59.0 5.23e-01 97.1% 53.7%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.77 56.0 5.50e-01 100.0% 71.1%
2l35A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.76 58.0 6.09e-01 100.0% 90.5%
4xvxA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.74 57.0 4.44e-01 100.0% 39.5%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.74 55.0 5.41e-01 100.0% 74.3%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 52.0 5.09e-01 98.6% 70.7%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.71 50.0 4.68e-01 98.6% 60.5%
1v66A00 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.70 50.0 5.15e-01 75.7% 80.0%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 41.0 4.31e-01 97.1% 63.5%
4m70I00 1.20.5.4130 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 61.0 5.16e-01 97.1% 62.0%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.65 61.0 5.86e-01 100.0% 92.4%
4neoA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.65 55.0 5.22e-01 94.3% 97.6%
3wvoC02 1.10.132.100 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.65 56.0 4.63e-01 98.6% 91.5%
7xb6B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 57.0 4.22e-01 100.0% 65.9%
6d5xA00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.64 56.0 4.45e-01 100.0% 73.5%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.64 46.0 4.38e-01 100.0% 63.5%
2f8lA01 1.10.150.470 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.64 53.0 5.15e-01 97.1% 81.5%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 56.0 5.56e-01 100.0% 93.2%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.64 52.0 5.37e-01 100.0% 95.5%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 56.0 3.80e-01 100.0% 28.8%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.63 52.0 5.06e-01 100.0% 83.3%
5ha6B00 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 57.0 5.49e-01 100.0% 91.1%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.62 56.0 4.37e-01 100.0% 50.3%
2fi1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 46.0 4.76e-01 80.0% 93.8%
4gr6B00 1.10.1200.210 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX 0.61 50.0 4.38e-01 88.6% 66.7%
3i5pA03 1.20.120.1880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleoporin, helical C-terminal domain 0.61 50.0 3.44e-01 90.0% 49.6%
3cqxC00 1.20.58.890 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 53.0 5.06e-01 95.7% 82.7%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.60 49.0 4.42e-01 90.0% 76.3%
2kzcA00 1.10.790.20 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Domain of unknown function DUF1476 0.60 47.0 4.47e-01 85.7% 87.1%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.59 53.0 4.96e-01 98.6% 80.2%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 53.0 4.59e-01 100.0% 75.7%
4fb2A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.59 49.0 3.15e-01 97.1% 65.8%
3rrkA02 1.20.1460.20 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › 0.58 52.0 4.00e-01 100.0% 93.5%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.58 46.0 4.78e-01 92.9% 93.9%
3rosA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.57 44.0 3.04e-01 85.7% 47.4%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.57 46.0 3.20e-01 100.0% 26.1%
1gpjA03 1.10.1200.70 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glutamyl tRNA-reductase dimerization domain 0.57 39.0 3.71e-01 71.4% 94.1%
1on2A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.57 35.0 3.67e-01 81.4% 66.7%
3vpzA02 3.40.367.20 Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › 0.57 50.0 3.63e-01 100.0% 45.0%
2ogiB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.56 46.0 3.33e-01 88.6% 62.7%
4aihF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 49.0 4.19e-01 100.0% 95.7%
1sz2A02 3.40.367.20 Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › 0.56 50.0 3.60e-01 100.0% 100.0%
6d2qA02 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.56 45.0 3.98e-01 88.6% 69.2%
1uzcA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.55 33.0 3.38e-01 80.0% 60.9%
1mw5A01 1.20.272.30 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.55 48.0 3.79e-01 97.1% 66.9%
1oe8A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 45.0 3.79e-01 98.6% 54.0%
2doeA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.51 34.0 3.27e-01 85.7% 57.8%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5060248 4044.1.1.0 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.83 54.0 5.46e-01 100.0% 67.1%
4128438 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.79 60.0 4.76e-01 100.0% 41.5%
4357455 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.76 50.0 4.73e-01 98.6% 56.5%
3907844 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.72 64.0 4.68e-01 100.0% 51.6%
3878853 4044.1.1.13 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › BicD 0.70 47.0 4.45e-01 95.7% 56.5%
3893471 130.1.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.69 48.0 5.12e-01 72.9% 85.0%
4932281 606.1.1.0 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.68 60.0 5.47e-01 100.0% 75.8%
2512676 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.68 59.0 4.12e-01 100.0% 78.6%
3408277 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.67 55.0 4.63e-01 100.0% 53.9%
3707093 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 56.0 4.06e-01 94.3% 53.0%
3291254 2004.1.1.286 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TraG-D_C 0.65 52.0 3.06e-01 90.0% 11.3%
3794285 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.65 49.0 4.81e-01 91.4% 76.0%
4018896 7022.1.1.1 ↗ alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT 0.64 59.0 4.79e-01 100.0% 56.8%
3925923 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.64 48.0 4.89e-01 91.4% 82.9%
4995732 604.32.1.0 ↗ alpha bundles › Spectrin repeat-like › Recombination protein uvsY › Recombination protein uvsY 0.64 57.0 4.54e-01 100.0% 57.9%
3741782 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 49.0 4.11e-01 82.9% 73.0%
3705227 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.62 42.0 4.10e-01 74.3% 62.5%
4938202 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.61 55.0 4.79e-01 100.0% 66.7%
3657930 3722.1.1.1 ↗ alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 0.61 44.0 2.75e-01 95.7% 14.3%
4349607 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.61 54.0 4.63e-01 100.0% 62.7%
5029782 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.60 50.0 4.62e-01 100.0% 71.1%
4025157 3810.1.1.0 ↗ alpha duplicates or obligate multimers › Uncharacterized protein YP_510488.1 › Uncharacterized protein YP_510488.1 › Uncharacterized protein YP_510488.1 0.59 46.0 4.41e-01 88.6% 100.0%
5079583 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.59 46.0 3.07e-01 84.3% 55.7%
3584822 3291.1.1.147 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › MT 0.59 50.0 4.17e-01 100.0% 55.0%
5050318 5076.2.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.59 51.0 3.46e-01 100.0% 26.2%
1206851 183.1.1.1 ↗ alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C 0.59 42.0 4.03e-01 75.7% 66.7%
5032563 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.58 52.0 4.42e-01 100.0% 68.7%
3651890 604.1.1.3 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › MAP65_ASE1 0.56 50.0 3.66e-01 100.0% 45.4%
3516714 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.56 50.0 3.74e-01 100.0% 41.2%
5051840 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.55 50.0 4.65e-01 98.6% 100.0%
3723504 3614.1.2.0 ↗ alpha arrays › T4 RNA ligase › T4 RNA ligase 0.54 38.0 3.61e-01 74.3% 69.4%
3839582 164.1.1.1 ↗ alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 0.53 43.0 3.87e-01 92.9% 64.2%
3857272 10.2.1.39 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C 0.52 43.0 3.13e-01 97.1% 76.8%