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OR521086.1__WNO28573.1__SEA_HIGHBURY_130__00128
Bact-VirOR521086.1__WNO28573.1__SEA_HIGHBURY_130__00128
Identity
- Accession:
- OR521086 ↗
- Kingdom:
- phage
Quality
95.6
mean pLDDT
Taxonomy
TaxID: 3077828
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-97
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ofcX04 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 44.0 | 4.43e-01 | 94.7% | 73.4% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.58 | 43.0 | 4.51e-01 | 77.9% | 87.2% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.58 | 43.0 | 4.19e-01 | 78.9% | 82.4% |
| 3doeB00 | 1.20.1520.10 | Mainly Alpha › Up-down Bundle › Adp-ribosylation factor-like protein 2-binding protein fold › ADP-ribosylation factor-like 2-binding protein, domain | 0.58 | 46.0 | 4.37e-01 | 85.3% | 88.6% |
| 1s1fA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 48.0 | 3.26e-01 | 95.8% | 37.8% |
| 4nnzA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 46.0 | 3.66e-01 | 87.4% | 84.8% |
| 2dlaA01 | 1.20.930.50 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.57 | 44.0 | 3.77e-01 | 83.2% | 79.4% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.57 | 42.0 | 4.01e-01 | 77.9% | 88.4% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.57 | 42.0 | 3.83e-01 | 77.9% | 63.8% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 39.0 | 3.50e-01 | 70.5% | 88.1% |
| 2yvkA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.57 | 39.0 | 3.37e-01 | 82.1% | 45.3% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 46.0 | 4.07e-01 | 93.7% | 89.3% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.55 | 40.0 | 3.90e-01 | 78.9% | 84.5% |
| 3k4oA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 47.0 | 3.50e-01 | 98.9% | 83.1% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 39.0 | 3.86e-01 | 75.8% | 83.2% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.54 | 38.0 | 3.47e-01 | 74.7% | 60.6% |
| 3o7iA00 | 1.10.3330.10 | Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | 0.53 | 41.0 | 3.57e-01 | 84.2% | 86.7% |
| 3tixA02 | 6.10.140.1690 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 39.0 | 4.20e-01 | 80.0% | 100.0% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 33.0 | 3.62e-01 | 70.5% | 78.7% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.52 | 37.0 | 3.74e-01 | 74.7% | 89.5% |
| 1wimA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 31.0 | 3.19e-01 | 93.7% | 59.6% |
| 8einA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 45.0 | 3.24e-01 | 100.0% | 45.8% |
| 1kpgD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 3.06e-01 | 91.6% | 96.5% |
| 3rc3A05 | 1.20.58.1080 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 34.0 | 3.23e-01 | 70.5% | 58.4% |
| 1jb0A00 | 1.20.1130.10 | Mainly Alpha › Up-down Bundle › Photosystem I p700 chlorophyll A apoprotein A1 › Photosystem I PsaA/PsaB | 0.50 | 41.0 | 2.46e-01 | 89.5% | 39.3% |
| 5eufA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 43.0 | 3.52e-01 | 98.9% | 83.2% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.50 | 43.0 | 2.80e-01 | 98.9% | 35.4% |
| 1ngkB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 40.0 | 3.72e-01 | 89.5% | 96.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025622 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 52.0 | 5.76e-01 | 93.7% | 98.7% |
| 4629067 | 633.24.1.5 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › PF29080 | 0.68 | 56.0 | 5.90e-01 | 94.7% | 100.0% |
| 3925681 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.62 | 52.0 | 5.34e-01 | 97.9% | 97.8% |
| 4129965 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.62 | 51.0 | 5.25e-01 | 96.8% | 96.7% |
| 4928535 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.61 | 46.0 | 2.91e-01 | 78.9% | 28.9% |
| 5023516 | 3922.1.1.269 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Rad50_zn_hook | 0.60 | 32.0 | 2.36e-01 | 83.2% | 20.0% |
| 4004696 | 3281.1.1.2 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N | 0.59 | 43.0 | 2.76e-01 | 78.9% | 28.2% |
| 3266812 | 3291.1.1.211 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › EMC3_TMCO1 | 0.56 | 42.0 | 3.60e-01 | 81.1% | 99.4% |
| 3593195 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.56 | 37.0 | 3.90e-01 | 75.8% | 76.5% |
| 3609889 | 633.15.1.0 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N | 0.56 | 38.0 | 3.28e-01 | 71.6% | 92.5% |
| None | — | 0.55 | 41.0 | 3.82e-01 | 95.8% | 60.8% | |
| 3472309 | 633.21.1.10 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › MARVEL | 0.55 | 41.0 | 3.73e-01 | 80.0% | 81.5% |
| 3259718 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 32.0 | 3.13e-01 | 92.6% | 50.5% |
| 4001433 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.55 | 46.0 | 3.88e-01 | 95.8% | 89.4% |
| 3487890 | 3069.1.1.0 ↗ | alpha arrays › BART › BART › BART | 0.54 | 47.0 | 4.47e-01 | 100.0% | 99.1% |
| 3928457 | 185.1.3.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › GDNF receptor › GDNF | 0.53 | 41.0 | 4.25e-01 | 83.2% | 90.0% |
| 3510163 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.53 | 37.0 | 3.58e-01 | 73.7% | 72.7% |
| 3790376 | 109.4.1.1636 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › C12orf66_like | 0.53 | 39.0 | 2.88e-01 | 78.9% | 67.3% |
| 3710847 | 109.4.1.173 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatA_aux_su | 0.53 | 39.0 | 3.07e-01 | 78.9% | 89.0% |
| 3617192 | 108.1.1.146 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30344 | 0.53 | 39.0 | 2.63e-01 | 82.1% | 19.0% |
| 4046381 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.51 | 44.0 | 3.19e-01 | 96.8% | 59.7% |
| 3269617 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.51 | 36.0 | 3.20e-01 | 73.7% | 51.4% |
| 3403082 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 36.0 | 2.84e-01 | 73.7% | 52.7% |