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OR521087.1__WNO28608.1__SEA_MADKILLAH_24__00024
Bact-VirOR521087.1__WNO28608.1__SEA_MADKILLAH_24__00024
Identity
- Accession:
- OR521087 ↗
- Kingdom:
- phage
Quality
59.9
mean pLDDT
Taxonomy
TaxID: 3069509
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-96
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.70 | 48.0 | 4.22e-01 | 71.0% | 78.2% |
| 1w0pA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 50.0 | 3.73e-01 | 76.8% | 56.5% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.69 | 48.0 | 3.48e-01 | 72.5% | 83.8% |
| 3gd0A02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.68 | 46.0 | 3.97e-01 | 71.0% | 79.5% |
| 1nr0A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 53.0 | 3.42e-01 | 89.9% | 95.5% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 48.0 | 3.13e-01 | 81.2% | 94.2% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 43.0 | 3.95e-01 | 72.5% | 84.4% |
| 4a2lF02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 49.0 | 3.21e-01 | 89.9% | 93.7% |
| 1bymA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.61 | 41.0 | 3.73e-01 | 71.0% | 75.3% |
| 1fblA02 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.60 | 49.0 | 3.61e-01 | 92.8% | 91.6% |
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.59 | 48.0 | 3.23e-01 | 89.9% | 97.1% |
| 3v9fA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 48.0 | 3.09e-01 | 89.9% | 94.5% |
| 1k32A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 46.0 | 2.98e-01 | 88.4% | 98.6% |
| 8f5pC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 46.0 | 3.10e-01 | 94.2% | 82.9% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 36.0 | 2.77e-01 | 73.9% | 67.4% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 39.0 | 3.29e-01 | 81.2% | 94.4% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.52 | 38.0 | 3.71e-01 | 92.8% | 69.6% |
| 1md6A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 42.0 | 3.42e-01 | 98.6% | 96.8% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 38.0 | 3.71e-01 | 82.6% | 93.6% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 41.0 | 2.75e-01 | 94.2% | 77.2% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 41.0 | 2.73e-01 | 95.7% | 83.6% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3688874 | 219.1.1.9 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 | 0.72 | 50.0 | 3.35e-01 | 72.5% | 77.4% |
| 3496153 | 219.1.1.9 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 | 0.71 | 49.0 | 3.45e-01 | 71.0% | 84.4% |
| 3498989 | 219.1.1.9 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 | 0.71 | 49.0 | 3.26e-01 | 72.5% | 60.7% |
| 4416711 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 48.0 | 3.03e-01 | 72.5% | 53.4% |
| 3453949 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.68 | 47.0 | 3.04e-01 | 72.5% | 23.1% |
| 4296952 | 5.1.4.250 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF2415 | 0.68 | 51.0 | 3.28e-01 | 81.2% | 88.2% |
| 4891048 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.68 | 51.0 | 3.08e-01 | 81.2% | 75.2% |
| 4527067 | 206.1.3.40 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD | 0.68 | 54.0 | 3.75e-01 | 91.3% | 68.2% |
| 3668377 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.66 | 51.0 | 3.04e-01 | 82.6% | 79.6% |
| 3998029 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 45.0 | 3.92e-01 | 71.0% | 78.1% |
| 3716034 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 49.0 | 3.13e-01 | 79.7% | 79.4% |
| 4969674 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 49.0 | 3.11e-01 | 81.2% | 95.4% |
| 3926070 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.64 | 49.0 | 3.13e-01 | 82.6% | 80.6% |
| 4029138 | 5.1.4.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD | 0.64 | 47.0 | 3.03e-01 | 78.3% | 87.7% |
| 3655121 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 49.0 | 2.96e-01 | 82.6% | 76.7% |
| 3914165 | 5.1.4.269 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML | 0.63 | 52.0 | 3.29e-01 | 91.3% | 83.9% |
| 3483289 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 43.0 | 4.46e-01 | 73.9% | 100.0% |
| 4935681 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.51e-01 | 72.5% | 98.2% |
| 5002449 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.57e-01 | 73.9% | 98.2% |
| 3464671 | 4.1.1.136 ↗ | beta barrels › SH3 › SH3 › SH3 › NMD_SH3 | 0.61 | 47.0 | 4.68e-01 | 84.1% | 97.1% |
| 3241660 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.60 | 48.0 | 3.86e-01 | 87.0% | 88.9% |
| 185631 | 5.1.4.26 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Reg_prop | 0.59 | 49.0 | 3.15e-01 | 89.9% | 93.9% |
| 3901670 | 5.1.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin | 0.59 | 48.0 | 3.46e-01 | 94.2% | 84.0% |
| 3923382 | 5.1.11.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DPPIV_N | 0.58 | 48.0 | 2.95e-01 | 92.8% | 99.3% |
| 1921564 | 101.1.2.237 ↗ | alpha arrays › HTH › HTH › winged helix domain › ThcOx | 0.58 | 44.0 | 3.69e-01 | 81.2% | 89.6% |
| 4352331 | 101.1.2.788 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF29760 | 0.56 | 35.0 | 3.22e-01 | 94.2% | 47.8% |
| 3409554 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.56 | 38.0 | 3.48e-01 | 71.0% | 100.0% |
| 426018 | 5.1.4.27 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 42.0 | 2.73e-01 | 87.0% | 76.4% |
| 3524786 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 37.0 | 2.73e-01 | 72.5% | 71.3% |
| 3448051 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 44.0 | 3.10e-01 | 95.7% | 91.8% |
| 3806421 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.53 | 38.0 | 3.94e-01 | 92.8% | 80.0% |
| 3326520 | 331.23.1.7 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C | 0.53 | 39.0 | 3.83e-01 | 95.7% | 72.0% |
| 5043213 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.53 | 37.0 | 2.81e-01 | 78.3% | 92.5% |
| 3743437 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.52 | 42.0 | 3.20e-01 | 94.2% | 91.6% |
| 3797677 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 2.96e-01 | 100.0% | 57.3% |