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OR521087.1__WNO28612.1__SEA_MADKILLAH_28__00028
Bact-VirOR521087.1__WNO28612.1__SEA_MADKILLAH_28__00028
Identity
- Accession:
- OR521087 ↗
- Kingdom:
- phage
Quality
95.8
mean pLDDT
Taxonomy
TaxID: 3069509
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-89
Domain cluster:
rep: SR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00041__D2-66
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 56.0 | 5.12e-01 | 95.2% | 88.8% |
| 4hwmA00 | 2.40.128.500 | Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein | 0.61 | 53.0 | 4.71e-01 | 94.0% | 70.1% |
| 3u7vA02 | 2.60.220.20 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › putative beta-Galactosidase from caulobacter crescentus | 0.61 | 41.0 | 3.45e-01 | 70.2% | 90.3% |
| 5t5lA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 3.69e-01 | 94.0% | 72.1% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 53.0 | 4.29e-01 | 100.0% | 78.7% |
| 3kg6C00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.59 | 45.0 | 3.11e-01 | 81.0% | 66.1% |
| 2xstA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 52.0 | 4.30e-01 | 100.0% | 78.5% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.57 | 49.0 | 4.22e-01 | 95.2% | 77.9% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 35.0 | 3.91e-01 | 85.7% | 86.9% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 39.0 | 3.20e-01 | 75.0% | 100.0% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.55 | 47.0 | 4.01e-01 | 94.0% | 84.9% |
| 1k3xA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.55 | 44.0 | 3.82e-01 | 85.7% | 64.3% |
| 2b1xA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.55 | 46.0 | 3.18e-01 | 96.4% | 69.8% |
| 5kzwA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.54 | 42.0 | 3.11e-01 | 84.5% | 39.1% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.53 | 46.0 | 3.52e-01 | 92.9% | 52.0% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 42.0 | 4.19e-01 | 98.8% | 83.7% |
| 1uwyA02 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.52 | 30.0 | 2.93e-01 | 100.0% | 47.4% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.52 | 38.0 | 2.90e-01 | 95.2% | 31.0% |
| 3hslX00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 42.0 | 2.89e-01 | 86.9% | 95.8% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.52 | 36.0 | 3.16e-01 | 75.0% | 47.6% |
| 2xtsA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.30e-01 | 77.4% | 100.0% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 43.0 | 3.22e-01 | 94.0% | 68.0% |
| 3dmeA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 3.26e-01 | 94.0% | 86.4% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 44.0 | 3.42e-01 | 97.6% | 99.5% |
| 3qijB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 3.96e-01 | 100.0% | 80.9% |
| 1dxkA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 38.0 | 2.83e-01 | 98.8% | 30.8% |
| 6u5uG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 34.0 | 2.99e-01 | 71.4% | 46.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4380331 | 295.1.1.27 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 | 0.66 | 43.0 | 4.67e-01 | 81.0% | 80.0% |
| 3390473 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 43.0 | 4.03e-01 | 71.4% | 59.0% |
| 3729927 | 301.7.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP | 0.62 | 42.0 | 3.54e-01 | 70.2% | 99.3% |
| 4029623 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 44.0 | 2.65e-01 | 75.0% | 15.4% |
| 185792 | 9.17.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipoprotein YedD › Lipoprotein YedD › YedD | 0.61 | 53.0 | 4.70e-01 | 94.0% | 70.1% |
| 3695968 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.60 | 40.0 | 3.23e-01 | 76.2% | 34.1% |
| 5032631 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.60 | 50.0 | 3.60e-01 | 91.7% | 99.2% |
| 5001380 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 34.0 | 3.55e-01 | 72.6% | 57.5% |
| 3709761 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 44.0 | 3.96e-01 | 79.8% | 77.5% |
| 2464247 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.56 | 36.0 | 3.92e-01 | 86.9% | 81.8% |
| 1883345 | 1099.1.1.1 ↗ | a+b two layers › RNase inhibitor Dip › RNase inhibitor Dip › RNase inhibitor Dip › Dip | 0.54 | 40.0 | 2.88e-01 | 78.6% | 83.6% |
| 3288144 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.54 | 47.0 | 4.55e-01 | 96.4% | 98.9% |
| 3273263 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.54 | 47.0 | 3.04e-01 | 97.6% | 75.9% |
| 4160544 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 42.0 | 3.52e-01 | 91.7% | 94.0% |
| 4457054 | 3321.1.1.1 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander | 0.51 | 35.0 | 2.99e-01 | 71.4% | 71.1% |
| 5053926 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 35.0 | 3.57e-01 | 70.2% | 76.2% |
| 3222353 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.80e-01 | 100.0% | 70.4% |
| 3236030 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.78e-01 | 100.0% | 67.9% |
| None | — | 0.50 | 45.0 | 2.98e-01 | 100.0% | 29.7% |