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OR525698.1__WQN06405.1__X__00077

Bact-Vir

OR525698.1__WQN06405.1__X__00077

Identity

Accession:
OR525698 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-95
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r6iA01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.80 61.0 4.73e-01 86.0% 50.0%
1wxcB01 3.30.1880.10 Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like 0.77 63.0 5.62e-01 93.0% 69.4%
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.74 57.0 5.90e-01 86.0% 100.0%
2d9hA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.69 47.0 3.94e-01 72.1% 41.0%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 56.0 4.49e-01 100.0% 90.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 45.0 3.12e-01 83.7% 20.7%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 55.0 4.29e-01 93.0% 88.0%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 55.0 4.48e-01 100.0% 85.3%
1ncsA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.68 55.0 5.41e-01 95.3% 93.6%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 39.0 2.94e-01 95.3% 23.8%
2cs0A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 51.0 4.13e-01 93.0% 68.4%
1rsgA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 51.0 3.12e-01 83.7% 92.2%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 54.0 4.29e-01 100.0% 89.0%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 3.10e-01 86.0% 22.4%
2plyB01 1.10.10.2770 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 45.0 3.11e-01 86.0% 22.5%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 3.70e-01 86.0% 40.0%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 53.0 4.17e-01 100.0% 81.7%
2gsbA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 49.0 4.01e-01 86.0% 61.9%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 49.0 3.80e-01 100.0% 80.7%
17gsA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 48.0 3.83e-01 93.0% 63.6%
2ntxA01 1.20.58.2010 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 0.61 48.0 3.09e-01 95.3% 18.1%
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 47.0 3.02e-01 100.0% 22.1%
3bbyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 44.0 4.07e-01 93.0% 71.9%
5a4uA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 47.0 3.93e-01 100.0% 75.6%
3jygA00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.57 48.0 3.24e-01 95.3% 82.8%
4hz4A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 46.0 3.92e-01 100.0% 78.6%
5dcmB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.29e-01 86.0% 35.7%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.57 48.0 3.37e-01 100.0% 59.7%
2re3A01 3.10.540.10 Alpha Beta › Roll › duf1285 like fold › duf1285 like domain 0.56 39.0 3.21e-01 74.4% 60.2%
4iw9B01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 47.0 3.71e-01 100.0% 65.7%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 48.0 3.60e-01 95.3% 82.5%
5o7oC01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 47.0 3.35e-01 93.0% 89.6%
8gr2A01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.55 45.0 3.00e-01 97.7% 35.4%
2amyA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 43.0 3.15e-01 93.0% 82.6%
4msxA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 37.0 3.03e-01 76.7% 58.1%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.53 45.0 3.56e-01 97.7% 62.9%
1ywyA00 3.40.1170.40 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › Protein of unknown function DUF3203 0.52 35.0 3.14e-01 74.4% 47.3%
3gwaA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 41.0 2.81e-01 90.7% 83.9%
1gteB05 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 41.0 2.46e-01 88.4% 52.3%
5fokB01 2.170.130.10 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › TonB-dependent receptor, plug domain 0.52 40.0 3.02e-01 90.7% 56.9%
1w5sA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.27e-01 95.3% 39.8%
3ry3A02 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.50 40.0 2.62e-01 100.0% 27.1%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974688 4325.1.1.0 mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.88 67.0 6.35e-01 81.4% 92.0%
5075465 4325.1.1.0 mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.82 64.0 5.77e-01 86.0% 80.0%
3473267 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.82 64.0 6.01e-01 86.0% 69.8%
3954708 4325.1.1.9 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF26003 0.81 71.0 6.77e-01 95.3% 98.0%
3228878 386.1.1.18 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz 0.78 63.0 5.78e-01 88.4% 70.9%
3485364 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.78 65.0 6.25e-01 95.3% 84.0%
3927790 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.77 64.0 6.39e-01 93.0% 95.6%
3312039 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.75 60.0 5.62e-01 88.4% 77.4%
3894682 386.1.1.242 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_16 0.70 58.0 5.00e-01 95.3% 62.9%
3481722 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.70 58.0 4.50e-01 100.0% 64.8%
3247002 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.69 56.0 4.26e-01 95.3% 62.7%
3354127 502.1.1.0 a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain 0.69 58.0 5.28e-01 97.7% 70.0%
3644530 502.1.1.1 a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.69 55.0 5.00e-01 93.0% 70.0%
5071705 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.68 44.0 2.96e-01 86.0% 17.7%
2987316 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 58.0 4.23e-01 97.7% 50.4%
3619626 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 54.0 4.30e-01 93.0% 71.6%
3249214 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 54.0 4.02e-01 95.3% 48.3%
4122063 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 43.0 3.10e-01 83.7% 22.4%
3503621 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 57.0 4.59e-01 100.0% 81.1%
3421663 502.1.1.1 a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.67 55.0 4.82e-01 97.7% 60.0%
3478371 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 57.0 4.33e-01 100.0% 86.4%
3581699 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.66 55.0 4.10e-01 97.7% 58.3%
3514017 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 53.0 3.97e-01 93.0% 61.7%
3768377 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 51.0 3.84e-01 93.0% 78.3%
3997534 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 53.0 4.04e-01 100.0% 57.5%
4550200 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 52.0 4.09e-01 100.0% 78.2%
3350669 502.1.1.1 a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.65 53.0 4.64e-01 97.7% 60.0%
4000801 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 50.0 3.75e-01 93.0% 69.6%
4144386 502.1.1.1 a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.63 51.0 4.51e-01 97.7% 61.4%
4002956 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 51.0 3.84e-01 100.0% 74.4%
4978793 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.63 43.0 2.92e-01 86.0% 19.4%
4963287 375.1.1.334 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_0758 0.62 46.0 4.35e-01 83.7% 89.1%
3635861 5001.1.1.61 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › DUF2434 0.61 42.0 2.48e-01 72.1% 27.2%
5013930 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.61 42.0 2.77e-01 72.1% 61.0%
3933051 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.61 53.0 3.22e-01 100.0% 20.4%
3257384 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 49.0 3.84e-01 100.0% 75.5%
3073345 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.60 52.0 3.98e-01 100.0% 86.1%
3945404 502.1.1.0 a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain 0.60 45.0 4.09e-01 100.0% 58.5%
5072957 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.59 47.0 3.18e-01 90.7% 23.2%
5072854 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.58 45.0 2.94e-01 88.4% 20.6%
4994219 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.57 43.0 2.63e-01 81.4% 52.8%
3940263 3409.1.1.0 a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain 0.57 47.0 3.37e-01 100.0% 54.2%
4433457 205.1.1.20 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 0.57 40.0 3.54e-01 76.7% 92.3%
5033472 7579.1.1.23 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAF-AH_p_II 0.56 47.0 2.82e-01 97.7% 92.9%
3990615 221.1.1.36 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N 0.55 39.0 3.71e-01 81.4% 64.0%
4992368 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.55 44.0 2.96e-01 88.4% 27.3%
1166576 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.55 46.0 3.46e-01 95.3% 80.4%
4946426 3241.1.1.0 alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 0.55 39.0 2.56e-01 76.7% 24.7%
3498567 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.55 45.0 3.00e-01 100.0% 46.0%
5055185 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.55 43.0 3.85e-01 86.0% 75.0%
4941350 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.54 44.0 2.73e-01 88.4% 19.1%
5076626 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.52 40.0 2.72e-01 88.4% 54.6%
4194051 2003.1.5.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_4 0.51 43.0 2.82e-01 97.7% 35.7%
3551904 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.50 41.0 2.70e-01 100.0% 57.3%
3835486 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.50 42.0 2.75e-01 100.0% 78.6%
3931837 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.50 38.0 3.10e-01 100.0% 92.7%