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OR525698.1__WQN06416.1__X__00088

Bact-Vir

OR525698.1__WQN06416.1__X__00088

Identity

Accession:
OR525698 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Krischvirus› Escherichia_phage_vB-Eco-KMB43

TaxID: 3093649

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-61
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23903.2 best Phage_zn_bind_2 80.8 7.50e-23 75.9% 95.3%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tpuA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.69 39.0 4.75e-01 75.9% 89.2%
1vd4A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 46.0 4.53e-01 79.3% 69.4%
6nw1A00 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.58 40.0 4.51e-01 77.6% 95.6%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 41.0 3.94e-01 86.2% 85.7%
1yc5A02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.54 44.0 4.01e-01 94.8% 66.7%
2mamA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 3.46e-01 91.4% 88.1%
3goxA02 3.30.60.130 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.52 37.0 3.80e-01 77.6% 81.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.77e-01 84.5% 75.4%
4dolA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.51 38.0 2.96e-01 86.2% 83.3%
1gz2A00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.51 32.0 2.50e-01 91.4% 26.6%
2zetC00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.50 34.0 2.63e-01 70.7% 65.2%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 35.0 3.48e-01 77.6% 87.1%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3040112 375.1.1.22 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD 0.82 44.0 4.73e-01 74.1% 62.0%
4946781 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.82 59.0 6.59e-01 75.9% 97.8%
4019034 375.1.1.22 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD 0.81 44.0 5.31e-01 75.9% 80.0%
4964926 375.1.1.335 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7117 0.81 48.0 5.68e-01 81.0% 87.5%
4024048 375.1.1.22 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DNA_RNApol_7kD 0.80 44.0 4.82e-01 75.9% 66.7%
4084473 375.1.1.8 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HypA 0.75 43.0 4.79e-01 77.6% 73.3%
3245312 375.1.1.51 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 0.74 41.0 5.05e-01 75.9% 91.4%
3188296 375.1.1.132 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NOB1_Zn_bind 0.74 39.0 3.91e-01 75.9% 50.0%
4015651 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 42.0 5.17e-01 77.6% 94.3%
5033134 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 51.0 5.59e-01 74.1% 97.8%
4666101 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 39.0 4.37e-01 75.9% 71.1%
5016230 375.1.1.64 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX 0.66 38.0 4.41e-01 77.6% 82.5%
4944389 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 47.0 4.55e-01 77.6% 72.3%
3640260 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 42.0 2.90e-01 74.1% 19.0%
3928506 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.62 44.0 3.92e-01 75.9% 60.0%
3460634 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.60 52.0 4.01e-01 100.0% 70.0%
4029392 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.60 40.0 2.90e-01 77.6% 22.2%
3691410 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 3.96e-01 100.0% 78.5%
3622991 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 47.0 3.86e-01 100.0% 68.3%
4217322 375.1.1.46 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g 0.55 40.0 3.78e-01 77.6% 87.1%
4969313 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 39.0 3.70e-01 77.6% 88.6%
3209317 376.1.1.125 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2, zf-RING_UBOX 0.54 37.0 2.82e-01 74.1% 34.8%
4091907 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.53 43.0 3.43e-01 96.6% 80.7%
3226615 4.1.1.389 ↗ beta barrels › SH3 › SH3 › SH3 › PF30352 0.52 39.0 3.40e-01 84.5% 62.1%
4051081 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.50 37.0 3.75e-01 86.2% 96.7%