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OR525698.1__WQN06519.1__X__00191

Bact-Vir

OR525698.1__WQN06519.1__X__00191

Identity

Accession:
OR525698 ↗
Kingdom:
phage

Quality

84.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Krischvirus› Escherichia_phage_vB-Eco-KMB43

TaxID: 3093649

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-84
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4u3qB00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.63 51.0 4.84e-01 88.9% 97.0%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.63 57.0 4.19e-01 100.0% 56.5%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.63 52.0 4.76e-01 91.4% 97.2%
2qgyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 48.0 4.05e-01 84.0% 94.9%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 52.0 4.47e-01 100.0% 58.0%
3mkcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 44.0 3.68e-01 76.5% 93.1%
4e4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 44.0 3.69e-01 76.5% 82.3%
2oqhA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 44.0 3.92e-01 77.8% 94.7%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.59 33.0 2.91e-01 84.0% 37.0%
4bbwA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 46.0 3.03e-01 90.1% 67.4%
3t8qB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 44.0 3.92e-01 84.0% 95.7%
3gkeA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.56 42.0 3.71e-01 82.7% 89.2%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 40.0 3.49e-01 75.3% 95.2%
2b1xA02 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.55 43.0 3.79e-01 86.4% 96.8%
2m4lA00 2.40.128.360 Mainly Beta › Beta Barrel › Lipocalin › 0.54 46.0 4.35e-01 95.1% 97.0%
7q04F01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.54 40.0 3.66e-01 79.0% 98.2%
1w1wA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 3.10e-01 92.6% 78.8%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.53 41.0 3.95e-01 91.4% 70.1%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 38.0 3.47e-01 76.5% 98.2%
7ylsB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.53 39.0 3.59e-01 80.2% 99.1%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.51 41.0 3.77e-01 88.9% 81.5%
3jamg01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 39.0 2.69e-01 84.0% 92.3%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.51 34.0 3.56e-01 77.8% 76.7%
4g59B00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.51 35.0 2.80e-01 71.6% 62.0%
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.51 42.0 4.27e-01 98.8% 92.5%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 34.0 3.31e-01 71.6% 60.8%
3vcaA02 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.50 41.0 3.64e-01 90.1% 86.6%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 40.0 2.81e-01 93.8% 81.2%
1bliA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 37.0 3.66e-01 96.3% 73.6%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1402067 9.1.1.6 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE 0.62 51.0 4.93e-01 90.1% 96.8%
3960237 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.56 41.0 3.67e-01 77.8% 90.4%
4423609 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.56 45.0 3.03e-01 92.6% 86.3%
3597545 9.2.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.56 50.0 4.22e-01 100.0% 98.5%
4487967 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.55 45.0 4.20e-01 87.7% 94.0%
3943095 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.55 41.0 3.38e-01 82.7% 72.7%
4024730 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.54 35.0 3.47e-01 84.0% 62.4%
3961067 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.54 43.0 3.72e-01 87.7% 78.5%
4542072 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.53 41.0 3.32e-01 84.0% 77.0%
4506377 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.53 42.0 3.47e-01 87.7% 70.3%
3693326 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.52 41.0 3.46e-01 87.7% 74.5%
4406661 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.52 41.0 3.43e-01 87.7% 77.3%
3426738 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.52 41.0 3.44e-01 87.7% 92.4%
3799100 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 42.0 2.82e-01 91.4% 73.1%
5009719 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.51 41.0 3.50e-01 91.4% 73.8%
4547005 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.51 41.0 3.47e-01 91.4% 70.7%
3794522 2488.1.1.7 ↗ a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › EMG1 0.51 36.0 3.03e-01 74.1% 70.0%
3278614 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.51 41.0 3.52e-01 90.1% 79.3%
3972313 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.51 41.0 3.52e-01 91.4% 79.3%
3678105 5.3.1.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.51 40.0 3.43e-01 87.7% 92.1%
3380077 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.50 38.0 2.54e-01 84.0% 40.9%
3288034 66.1.1.2 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2 0.50 39.0 3.57e-01 90.1% 85.8%
3727864 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.50 39.0 3.14e-01 87.7% 60.7%
4486119 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.50 40.0 3.48e-01 91.4% 79.3%