Back to structures

OR525700.1__WQN06728.1__X__00038

Bact-Vir

OR525700.1__WQN06728.1__X__00038

Identity

Accession:
OR525700 ↗
Kingdom:
phage

Quality

81.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-96
PDB
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.77 41.0 3.41e-01 100.0% 30.9%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.70 38.0 3.93e-01 77.8% 56.0%
1dzkA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 47.0 3.83e-01 79.0% 75.7%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 52.0 4.72e-01 92.6% 86.2%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 45.0 3.72e-01 79.0% 76.9%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 44.0 3.61e-01 79.0% 74.5%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 40.0 3.23e-01 71.6% 72.5%
1m2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.59 40.0 2.93e-01 70.4% 56.2%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 4.33e-01 91.4% 78.2%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 38.0 3.92e-01 80.2% 72.2%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 47.0 4.06e-01 96.3% 77.8%
2aujD03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 39.0 4.39e-01 76.5% 98.4%
1d8cA02 2.170.170.11 Mainly Beta › Beta Complex › Malate synthase G - maily-beta sub-domain › Malate synthase G - maily-beta sub-domain 0.54 40.0 3.40e-01 77.8% 66.4%
3ostA00 3.30.310.220 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Fungal kinase associated-1 domain 0.53 40.0 3.50e-01 79.0% 82.4%
4kh9B02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.52 44.0 3.90e-01 90.1% 89.4%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 47.0 3.82e-01 100.0% 74.5%
3p3yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.46e-01 88.9% 64.4%
1lqvB00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.51 38.0 3.03e-01 81.5% 85.5%
2be3B01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 40.0 3.37e-01 84.0% 74.1%
4lb8A02 2.60.40.3900 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 41.0 3.44e-01 88.9% 56.2%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 43.0 2.84e-01 100.0% 71.5%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.50 42.0 3.53e-01 92.6% 94.3%
4depC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 38.0 3.54e-01 81.5% 86.3%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3451905 5015.1.1.0 extended segments › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex 0.69 35.0 4.40e-01 70.4% 80.0%
3173378 109.4.1.338 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 0.66 39.0 2.75e-01 88.9% 18.8%
3999570 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.66 48.0 4.45e-01 77.8% 71.4%
4114152 4099.1.1.32 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF30019 0.65 37.0 3.91e-01 70.4% 61.3%
None 0.64 58.0 3.65e-01 100.0% 87.7%
3433959 11.2.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 0.63 47.0 4.40e-01 97.5% 64.0%
4671100 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 47.0 3.79e-01 79.0% 71.6%
3998221 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.63 49.0 4.03e-01 84.0% 62.8%
3616263 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.62 49.0 4.62e-01 86.4% 89.0%
4963350 220.1.1.323 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7115 0.61 44.0 4.08e-01 75.3% 79.0%
3583879 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.60 47.0 3.14e-01 84.0% 24.3%
4887870 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.59 44.0 3.48e-01 79.0% 66.7%
4932472 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 46.0 4.35e-01 84.0% 83.2%
3519117 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 44.0 3.36e-01 82.7% 69.5%
4124004 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.57 40.0 4.29e-01 72.8% 93.8%
4298724 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 41.0 3.31e-01 100.0% 40.0%
4961746 304.8.1.122 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DmsR_N 0.55 48.0 4.30e-01 97.5% 71.3%
3212364 5.1.5.27 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › APEH_N 0.55 41.0 2.65e-01 82.7% 45.1%
5030187 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.54 40.0 4.09e-01 79.0% 96.2%
3942636 4.8.1.38 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF3418 0.54 34.0 3.76e-01 77.8% 85.0%
3509056 221.13.1.0 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.53 40.0 3.51e-01 81.5% 87.2%
3588663 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.52 46.0 4.35e-01 98.8% 81.1%
3697999 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 44.0 3.10e-01 92.6% 37.6%
4991285 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 36.0 3.67e-01 100.0% 73.8%
3495848 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.52 46.0 2.85e-01 100.0% 92.6%
1281147 9.23.1.1 beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › Lipocalin_3 0.52 41.0 3.89e-01 84.0% 77.7%
4372915 613.1.1.1 alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c 0.52 41.0 2.65e-01 92.6% 71.1%
1294396 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.51 47.0 3.79e-01 100.0% 73.0%
5034804 11.1.1.284 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.51 36.0 2.76e-01 76.5% 48.8%
4204473 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 44.0 3.03e-01 100.0% 86.6%
3995477 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 31.0 3.61e-01 88.9% 90.9%