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OR525702.1__WQN07363.1__X__00110

Bact-Vir

OR525702.1__WQN07363.1__X__00110

Identity

Accession:
OR525702 ↗
Kingdom:
phage

Quality

81.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Tequatrovirus› Escherichia_phage_vB-Eco-KMB23

TaxID: 3093644

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-90
PDB
Domain cluster: rep: MT341500.1__QJI53183.1__EBPL_00142__00140__D31-97
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24205.2 best Antiholin 51.3 1.10e-13 100.0% 60.4%
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lynB00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.77 68.0 5.44e-01 100.0% 71.0%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.74 65.0 6.04e-01 100.0% 82.7%
3ckdA02 1.20.58.360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines 0.73 51.0 4.07e-01 73.0% 63.7%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.72 60.0 5.93e-01 100.0% 89.6%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.70 60.0 5.51e-01 100.0% 80.0%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.67 54.0 5.60e-01 100.0% 100.0%
1t5oA01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.66 50.0 3.91e-01 82.5% 84.4%
1jwjA01 3.90.340.10 Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 0.64 46.0 3.47e-01 96.8% 29.0%
2mabA00 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.64 45.0 3.74e-01 73.0% 44.0%
7r5yA01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.61 45.0 2.78e-01 79.4% 76.0%
5x9vA01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.60 54.0 3.62e-01 100.0% 29.8%
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.60 48.0 4.67e-01 95.2% 82.7%
3au4A01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.59 40.0 2.84e-01 71.4% 23.0%
2k3nA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.58 50.0 3.79e-01 100.0% 41.2%
2hkvA01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.58 47.0 3.66e-01 88.9% 87.9%
1ks9A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.57 50.0 4.07e-01 100.0% 91.1%
2wolA02 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.57 47.0 3.19e-01 90.5% 72.3%
3d3oA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.57 39.0 2.84e-01 71.4% 34.7%
1grlB01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.57 50.0 3.37e-01 100.0% 29.1%
3solA00 1.20.58.1630 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS 0.56 49.0 4.40e-01 100.0% 100.0%
2fi1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 38.0 3.81e-01 100.0% 70.3%
3ed5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 46.0 4.28e-01 95.2% 72.6%
3hgkE00 1.20.1280.110 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.55 38.0 3.61e-01 73.0% 83.1%
1ym3A00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.54 44.0 3.16e-01 90.5% 48.2%
1af7A01 1.10.155.10 Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain 0.54 45.0 4.20e-01 96.8% 87.5%
4p6zM01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 43.0 3.58e-01 96.8% 47.9%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 46.0 4.28e-01 95.2% 81.0%
1lshA02 1.25.10.20 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Vitellinogen, superhelical 0.54 38.0 2.42e-01 76.2% 15.5%
3egoA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.53 43.0 3.66e-01 98.4% 93.4%
3we9A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.52 46.0 3.08e-01 100.0% 52.2%
2qs7A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.52 41.0 3.18e-01 85.7% 97.1%
4kjmB01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.52 41.0 4.19e-01 87.3% 92.1%
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.51 44.0 3.99e-01 96.8% 81.4%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3447076 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 48.0 4.22e-01 71.4% 44.4%
4952935 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.73 61.0 6.04e-01 100.0% 90.8%
3550786 4246.1.1.2 ↗ a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 0.72 58.0 3.52e-01 95.2% 13.7%
3616358 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.72 61.0 5.97e-01 100.0% 87.1%
5070580 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.72 59.0 6.03e-01 100.0% 98.3%
3790611 142.1.1.22 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SCAF11-like_C 0.72 61.0 5.93e-01 100.0% 87.1%
4947265 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.72 61.0 5.92e-01 100.0% 85.7%
4985470 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.70 58.0 5.62e-01 100.0% 84.3%
4258320 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.70 62.0 5.72e-01 100.0% 83.7%
3508870 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.70 61.0 5.29e-01 100.0% 63.0%
3507720 4009.1.1.3 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › KTI12 0.69 59.0 5.22e-01 100.0% 87.8%
4942992 103.5.1.0 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like 0.69 51.0 5.61e-01 93.7% 100.0%
3670388 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 43.0 3.38e-01 71.4% 30.4%
5082960 159.1.2.35 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › HAAS 0.67 55.0 5.30e-01 93.7% 94.7%
3895555 142.1.1.5 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI 0.67 56.0 5.31e-01 100.0% 77.5%
3346187 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.65 54.0 5.31e-01 100.0% 87.1%
5084048 3831.1.1.15 ↗ alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › HAAS 0.65 56.0 5.12e-01 100.0% 88.2%
3545484 103.1.1.53 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TTC3_9th 0.64 50.0 5.06e-01 100.0% 89.2%
3959588 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.64 43.0 3.55e-01 71.4% 39.2%
3783815 101.1.10.22 ↗ alpha arrays › HTH › HTH › Cyclin-like › ORC6 0.64 53.0 4.54e-01 95.2% 60.0%
3465065 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 52.0 4.99e-01 100.0% 78.7%
4988448 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.62 53.0 3.90e-01 98.4% 90.3%
3174214 5081.1.1.0 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.61 54.0 3.92e-01 100.0% 85.0%
3996406 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.61 42.0 4.09e-01 74.6% 64.3%
3611418 632.2.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.61 47.0 4.56e-01 100.0% 75.7%
3946717 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.61 52.0 5.08e-01 100.0% 90.0%
3923696 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.59 41.0 3.74e-01 74.6% 53.3%
4270621 7544.1.1.1 ↗ a/b three-layered sandwiches › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain › Glycos_transf_3 0.58 37.0 2.45e-01 76.2% 15.1%
3611584 3050.1.1.0 ↗ alpha bundles › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain 0.57 47.0 3.72e-01 100.0% 43.2%
3229576 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.57 48.0 4.48e-01 96.8% 83.7%
3712511 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.57 47.0 4.33e-01 96.8% 69.4%
3392896 1128.1.1.1 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.55 47.0 4.29e-01 95.2% 77.6%
5034164 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.52 41.0 3.77e-01 87.3% 75.3%
2549596 6091.1.1.2 ↗ alpha bundles › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › SpGH101_helical 0.52 45.0 4.22e-01 92.1% 77.3%
3734408 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.51 44.0 2.92e-01 98.4% 32.3%
4025391 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.51 41.0 3.82e-01 93.7% 83.5%
5031457 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.51 41.0 3.69e-01 90.5% 62.2%
4479748 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.50 40.0 3.60e-01 88.9% 61.1%
4096686 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.50 42.0 3.83e-01 92.1% 74.1%