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OR545054.1__WOZ55881.1__P41_00027__00027
Bact-VirOR545054.1__WOZ55881.1__P41_00027__00027
Identity
- Accession:
- OR545054 ↗
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-131
Domain cluster:
rep: KJ002054.2__AHJ10575.1__Spp001_67__00067__D760-856
D2
high
residues 223-291
Domain cluster:
rep: LN881737.1__CUL03539.1__X__00001__D148-210
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21446.4 best | Gp34_trimer | 73.0 | 4.00e-20 | 62.3% | 37.4% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.64 | 52.0 | 3.32e-01 | 89.9% | 27.8% |
| 3i7fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 46.0 | 3.74e-01 | 78.3% | 55.5% |
| 3lm3A02 | 3.30.1120.110 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 46.0 | 3.99e-01 | 81.2% | 74.8% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 44.0 | 3.51e-01 | 79.7% | 36.0% |
| 1nnvA01 | 3.10.450.140 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative | 0.61 | 44.0 | 3.95e-01 | 78.3% | 98.0% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 3.44e-01 | 84.1% | 41.0% |
| 3s8zA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.59 | 47.0 | 2.99e-01 | 84.1% | 24.7% |
| 3ke6B01 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.59 | 46.0 | 3.34e-01 | 89.9% | 58.8% |
| 5mmjp00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.58 | 41.0 | 3.94e-01 | 75.4% | 98.8% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 42.0 | 3.71e-01 | 78.3% | 63.2% |
| 4ktpB02 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.58 | 41.0 | 3.90e-01 | 75.4% | 96.3% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 41.0 | 3.80e-01 | 82.6% | 58.2% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.56 | 47.0 | 4.02e-01 | 92.8% | 83.0% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.56 | 43.0 | 3.27e-01 | 84.1% | 49.7% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.55 | 41.0 | 3.31e-01 | 84.1% | 40.7% |
| 5aj3P00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.55 | 38.0 | 3.34e-01 | 75.4% | 49.6% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.55 | 37.0 | 3.72e-01 | 72.5% | 68.9% |
| 3p0lD00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 40.0 | 2.98e-01 | 78.3% | 31.9% |
| 2r19A00 | 2.60.450.10 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain | 0.54 | 45.0 | 3.59e-01 | 91.3% | 58.5% |
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.53 | 47.0 | 3.12e-01 | 100.0% | 37.0% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 40.0 | 2.80e-01 | 82.6% | 84.5% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.53 | 41.0 | 3.11e-01 | 85.5% | 52.0% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.53 | 44.0 | 3.27e-01 | 91.3% | 37.1% |
| 7nn3B01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 41.0 | 2.73e-01 | 87.0% | 87.5% |
| 1nezH00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.48e-01 | 85.5% | 55.8% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 36.0 | 2.62e-01 | 71.0% | 93.0% |
| 5x7qA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.52 | 45.0 | 3.22e-01 | 100.0% | 55.3% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 38.0 | 3.69e-01 | 82.6% | 97.6% |
| 3lrrA00 | 2.170.150.30 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain | 0.51 | 36.0 | 3.12e-01 | 78.3% | 58.7% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 35.0 | 3.06e-01 | 75.4% | 43.7% |
| 4qycB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.34e-01 | 78.3% | 55.6% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.50 | 40.0 | 2.80e-01 | 92.8% | 40.4% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2559738 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.97 | 91.0 | 5.53e-01 | 100.0% | 19.0% |
| 2417913 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.94 | 90.0 | 5.36e-01 | 100.0% | 17.7% |
| 1841016 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.94 | 90.0 | 5.92e-01 | 100.0% | 29.8% |
| 3367161 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.65 | 50.0 | 3.93e-01 | 82.6% | 63.4% |
| 3342267 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 50.0 | 3.68e-01 | 84.1% | 77.2% |
| 3227515 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 48.0 | 3.92e-01 | 81.2% | 43.4% |
| 3309425 | 844.1.1.1 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub | 0.63 | 49.0 | 3.30e-01 | 87.0% | 59.7% |
| 3503233 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 50.0 | 2.90e-01 | 89.9% | 13.6% |
| 5043415 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 42.0 | 3.53e-01 | 71.0% | 40.8% |
| 3884108 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.61 | 43.0 | 2.93e-01 | 100.0% | 19.3% |
| 3441395 | 5.1.3.159 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 | 0.60 | 42.0 | 2.73e-01 | 72.5% | 31.0% |
| 4047807 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.59 | 42.0 | 4.00e-01 | 76.8% | 96.5% |
| 3505097 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.59 | 43.0 | 4.02e-01 | 76.8% | 67.1% |
| 5038410 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.59 | 47.0 | 3.18e-01 | 87.0% | 31.1% |
| 4309256 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.59 | 41.0 | 3.98e-01 | 75.4% | 98.8% |
| 4295539 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.59 | 41.0 | 3.60e-01 | 73.9% | 72.4% |
| 3634892 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.58 | 44.0 | 3.40e-01 | 81.2% | 63.2% |
| 4112934 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.58 | 41.0 | 4.00e-01 | 73.9% | 72.0% |
| 3941239 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.58 | 50.0 | 3.03e-01 | 100.0% | 45.4% |
| 4945459 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.58 | 47.0 | 3.12e-01 | 92.8% | 28.0% |
| 3811973 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.57 | 44.0 | 2.99e-01 | 88.4% | 44.9% |
| 3974774 | 897.2.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Protein E › Protein E | 0.56 | 43.0 | 3.50e-01 | 84.1% | 59.2% |
| 5017154 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 41.0 | 3.37e-01 | 81.2% | 65.9% |
| 4302789 | 837.1.1.1 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal_S16 | 0.55 | 40.0 | 3.35e-01 | 78.3% | 64.8% |
| 5022798 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 42.0 | 2.57e-01 | 85.5% | 16.5% |
| 2516379 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.55 | 38.0 | 3.38e-01 | 73.9% | 84.0% |
| 4613401 | 5.1.4.51 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_4 | 0.54 | 46.0 | 2.82e-01 | 100.0% | 27.6% |
| 3926459 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 3.63e-01 | 84.1% | 88.6% |
| 3739528 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.53 | 41.0 | 3.08e-01 | 88.4% | 55.1% |
| 3523834 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.53 | 39.0 | 2.53e-01 | 81.2% | 23.0% |
| 4946341 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.52 | 41.0 | 2.79e-01 | 84.1% | 45.7% |
| 4998065 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.52 | 38.0 | 3.18e-01 | 76.8% | 80.8% |
| 3659226 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.52 | 41.0 | 2.99e-01 | 91.3% | 43.9% |
| 3622343 | 5.1.3.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF | 0.52 | 40.0 | 2.83e-01 | 87.0% | 40.8% |
| 3504449 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.52 | 34.0 | 3.40e-01 | 76.8% | 65.7% |
| 4220400 | 288.1.1.1 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › Cu-oxidase_4 | 0.51 | 39.0 | 2.77e-01 | 84.1% | 96.2% |
| 3202006 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 40.0 | 2.61e-01 | 92.8% | 31.1% |
| 3510110 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.50 | 33.0 | 3.32e-01 | 78.3% | 65.7% |
| 5082957 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.50 | 41.0 | 2.79e-01 | 92.8% | 57.2% |
D3
high
residues 297-361
Domain cluster:
rep: NC_079179.1__YP_010844740.1__QNH00_gp79__00079__D392-447