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OR545055.1__WOZ55956.1__P44_00035__00035

Bact-Vir

OR545055.1__WOZ55956.1__P44_00035__00035

Identity

Accession:
OR545055 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Yersinia_phage_vB_YpM_44

TaxID: 3092595

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-88
PDB
Domain cluster: rep: NC_016767.1__YP_005098406.1__PEp14_0002__00002__D3-72
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01381.29 best HTH_3 29.4 8.90e-07 52.3% 65.5%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ox6D00 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.79 57.0 4.61e-01 75.6% 41.6%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 46.0 4.59e-01 83.7% 72.5%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.38e-01 74.4% 83.0%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 54.0 5.15e-01 100.0% 98.1%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 45.0 4.81e-01 80.2% 92.1%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4987535 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.84 59.0 5.02e-01 72.1% 55.4%
317770 101.1.4.22 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF4447 0.80 58.0 4.62e-01 75.6% 41.1%
3278243 101.1.4.10 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1870 0.80 58.0 5.13e-01 75.6% 55.8%
5038928 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.78 56.0 4.85e-01 74.4% 51.5%
3989087 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 55.0 5.02e-01 80.2% 97.3%
3963428 101.1.4.20 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.69 50.0 5.40e-01 91.9% 86.7%
3957550 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.64 49.0 5.38e-01 95.3% 97.1%
3988207 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.64 50.0 5.43e-01 93.0% 97.3%
3062945 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.63 45.0 4.96e-01 100.0% 90.1%
3955282 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.63 47.0 4.99e-01 100.0% 89.3%
5082802 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.61 51.0 4.90e-01 90.7% 79.0%
3286370 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.60 52.0 4.51e-01 100.0% 62.4%
4392992 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.60 46.0 4.75e-01 87.2% 86.3%
4507416 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.57 50.0 4.62e-01 100.0% 74.5%
4380868 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.57 48.0 4.42e-01 90.7% 74.5%
5039762 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.56 48.0 4.67e-01 95.3% 82.1%
None — 0.55 38.0 3.66e-01 73.3% 95.2%